RNA–Protein interactions for RNA: ENST00000487809.1

SUCLG1-206, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 2

Gene SUCLG1, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-206ENST00000487809 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
SUCLG1-206ENST00000487809 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
SUCLG1-206ENST00000487809 CFTRP13569 1480 aa11.48□□□□□ -0.57
SUCLG1-206ENST00000487809 HRO43593 1189 aa11.47□□□□□ -0.57
SUCLG1-206ENST00000487809 RSF1Q96T23 1441 aaPredicted RBP11.46□□□□□ -0.57
SUCLG1-206ENST00000487809 FOSBP53539 338 aa11.45□□□□□ -0.58
SUCLG1-206ENST00000487809 BCL2L12Q9HB09 334 aa11.45□□□□□ -0.58
SUCLG1-206ENST00000487809 EVI5O60447 810 aa11.44□□□□□ -0.58
SUCLG1-206ENST00000487809 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
SUCLG1-206ENST00000487809 JPH4Q96JJ6 628 aa11.44□□□□□ -0.58
SUCLG1-206ENST00000487809 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
SUCLG1-206ENST00000487809 ANO8Q9HCE9 1232 aaPredicted RBP11.42□□□□□ -0.58
SUCLG1-206ENST00000487809 EMILIN3Q9NT22 766 aa11.41□□□□□ -0.58
SUCLG1-206ENST00000487809 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
SUCLG1-206ENST00000487809 HCSTQ9UBK5 93 aa11.4□□□□□ -0.58
SUCLG1-206ENST00000487809 TOP2AP11388 1531 aaKnown RBP11.4□□□□□ -0.59
SUCLG1-206ENST00000487809 PTPREP23469 700 aa11.39□□□□□ -0.59
SUCLG1-206ENST00000487809 VPS9D1Q9Y2B5 631 aa11.39□□□□□ -0.59
SUCLG1-206ENST00000487809 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
SUCLG1-206ENST00000487809 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
SUCLG1-206ENST00000487809 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
SUCLG1-206ENST00000487809 SLC4A5Q9BY07 1137 aa11.37□□□□□ -0.59
SUCLG1-206ENST00000487809 KCTD12Q96CX2 325 aaKnown RBP11.35□□□□□ -0.59
SUCLG1-206ENST00000487809 ADAM33Q9BZ11 813 aa11.35□□□□□ -0.59
SUCLG1-206ENST00000487809 AMER1Q5JTC6 1135 aaPredicted RBP11.33□□□□□ -0.6
SUCLG1-206ENST00000487809 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
SUCLG1-206ENST00000487809 ZNF608Q9ULD9 1512 aaPredicted RBP11.33□□□□□ -0.6
SUCLG1-206ENST00000487809 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
SUCLG1-206ENST00000487809 CAMK2BQ13554 666 aa11.32□□□□□ -0.6
SUCLG1-206ENST00000487809 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
SUCLG1-206ENST00000487809 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
SUCLG1-206ENST00000487809 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
SUCLG1-206ENST00000487809 PCDHGA10Q9Y5H3 936 aa11.3□□□□□ -0.6
SUCLG1-206ENST00000487809 PPP1R3GB7ZBB8 358 aa11.28□□□□□ -0.6
SUCLG1-206ENST00000487809 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
SUCLG1-206ENST00000487809 TOPBP1Q92547 1522 aa11.27□□□□□ -0.61
SUCLG1-206ENST00000487809 DPYSL4O14531 572 aa11.27□□□□□ -0.61
SUCLG1-206ENST00000487809 PHF14O94880 888 aa11.27□□□□□ -0.61
SUCLG1-206ENST00000487809 TYW1BQ6NUM6 668 aa11.27□□□□□ -0.61
SUCLG1-206ENST00000487809 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
SUCLG1-206ENST00000487809 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
SUCLG1-206ENST00000487809 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
SUCLG1-206ENST00000487809 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
SUCLG1-206ENST00000487809 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
SUCLG1-206ENST00000487809 MRPL50Q8N5N7 158 aaKnown RBP11.25□□□□□ -0.61
SUCLG1-206ENST00000487809 NBPF3Q9H094 633 aa11.25□□□□□ -0.61
SUCLG1-206ENST00000487809 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
SUCLG1-206ENST00000487809 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
SUCLG1-206ENST00000487809 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.61
SUCLG1-206ENST00000487809 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
SUCLG1-206ENST00000487809 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
SUCLG1-206ENST00000487809 GOLGA8CPA6NN73 597 aa11.22□□□□□ -0.61
SUCLG1-206ENST00000487809 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
SUCLG1-206ENST00000487809 COL9A1P20849 921 aa11.21□□□□□ -0.61
SUCLG1-206ENST00000487809 PTPN5P54829 565 aa11.21□□□□□ -0.61
SUCLG1-206ENST00000487809 EPAS1Q99814 870 aa11.21□□□□□ -0.61
SUCLG1-206ENST00000487809 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
SUCLG1-206ENST00000487809 WNT2BQ93097 391 aa11.2□□□□□ -0.62
SUCLG1-206ENST00000487809 RABGEF1Q9UJ41 708 aa11.19□□□□□ -0.62
SUCLG1-206ENST00000487809 EIF4G3O43432 1585 aaKnown RBP11.18□□□□□ -0.62
SUCLG1-206ENST00000487809 DNMBPQ6XZF7 1577 aa11.18□□□□□ -0.62
SUCLG1-206ENST00000487809 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
SUCLG1-206ENST00000487809 PDIA6Q15084 440 aa11.17□□□□□ -0.62
SUCLG1-206ENST00000487809 SOGA1O94964 1423 aa11.16□□□□□ -0.62
SUCLG1-206ENST00000487809 PRDM2Q13029 1718 aa11.15□□□□□ -0.62
SUCLG1-206ENST00000487809 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
SUCLG1-206ENST00000487809 ARAP1Q96P48 1450 aa11.15□□□□□ -0.62
SUCLG1-206ENST00000487809 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.62
SUCLG1-206ENST00000487809 C6orf132Q5T0Z8 1188 aa11.15□□□□□ -0.62
SUCLG1-206ENST00000487809 CHMP7Q8WUX9 453 aaPredicted RBP11.15□□□□□ -0.62
SUCLG1-206ENST00000487809 DDX12PQ92771 950 aa11.15□□□□□ -0.62
SUCLG1-206ENST00000487809 PAXIP1Q6ZW49 1069 aaPredicted RBP11.14□□□□□ -0.63
SUCLG1-206ENST00000487809 CFAP44Q96MT7 982 aa11.14□□□□□ -0.63
SUCLG1-206ENST00000487809 RBM33Q96EV2 1170 aaKnown RBP11.13□□□□□ -0.63
SUCLG1-206ENST00000487809 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
SUCLG1-206ENST00000487809 NBR1Q14596 966 aa11.12□□□□□ -0.63
SUCLG1-206ENST00000487809 ANKK1Q8NFD2 765 aa11.12□□□□□ -0.63
SUCLG1-206ENST00000487809 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
SUCLG1-206ENST00000487809 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
SUCLG1-206ENST00000487809 E2F4Q16254 413 aa11.1□□□□□ -0.63
SUCLG1-206ENST00000487809 LAPTM4BQ86VI4 370 aa11.1□□□□□ -0.63
SUCLG1-206ENST00000487809 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
SUCLG1-206ENST00000487809 SNAPC4Q5SXM2 1469 aa11.09□□□□□ -0.63
SUCLG1-206ENST00000487809 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
SUCLG1-206ENST00000487809 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
SUCLG1-206ENST00000487809 CHD1O14646 1710 aa11.08□□□□□ -0.64
SUCLG1-206ENST00000487809 MAP3K7O43318 606 aa11.07□□□□□ -0.64
SUCLG1-206ENST00000487809 IFFO2Q5TF58 517 aa11.07□□□□□ -0.64
SUCLG1-206ENST00000487809 WDR70Q9NW82 654 aa11.07□□□□□ -0.64
SUCLG1-206ENST00000487809 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
SUCLG1-206ENST00000487809 BCAMP50895 628 aa11.06□□□□□ -0.64
SUCLG1-206ENST00000487809 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
SUCLG1-206ENST00000487809 ZFRQ96KR1 1074 aaKnown RBP11.06□□□□□ -0.64
SUCLG1-206ENST00000487809 SEPT9Q9UHD8 586 aaPredicted RBP11.06□□□□□ -0.64
SUCLG1-206ENST00000487809 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
SUCLG1-206ENST00000487809 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
SUCLG1-206ENST00000487809 SOWAHBA6NEL2 793 aa11.04□□□□□ -0.64
SUCLG1-206ENST00000487809 MAGI1Q96QZ7 1491 aaPredicted RBP11.03□□□□□ -0.64
SUCLG1-206ENST00000487809 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.65
SUCLG1-206ENST00000487809 CUX1P39880 1505 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms