RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 RAPGEF3O95398 923 aa12.58□□□□□ -0.4
NUDCD3-209ENST00000487118 MPHOSPH9Q99550 1183 aa12.58□□□□□ -0.4
NUDCD3-209ENST00000487118 MLH3Q9UHC1 1453 aa12.57□□□□□ -0.4
NUDCD3-209ENST00000487118 KIDINS220Q9ULH0 1771 aa12.56□□□□□ -0.4
NUDCD3-209ENST00000487118 MADDQ8WXG6 1647 aa12.56□□□□□ -0.4
NUDCD3-209ENST00000487118 MAGI2Q86UL8 1455 aa12.56□□□□□ -0.4
NUDCD3-209ENST00000487118 BCORL1Q5H9F3 1711 aa12.56□□□□□ -0.4
NUDCD3-209ENST00000487118 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-209ENST00000487118 RICTORQ6R327 1708 aa12.54□□□□□ -0.4
NUDCD3-209ENST00000487118 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
NUDCD3-209ENST00000487118 EIF2AK4Q9P2K8 1649 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-209ENST00000487118 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-209ENST00000487118 NUP155O75694 1391 aa12.53□□□□□ -0.4
NUDCD3-209ENST00000487118 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
NUDCD3-209ENST00000487118 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.41
NUDCD3-209ENST00000487118 DHX29Q7Z478 1369 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-209ENST00000487118 ANKRD30BQ9BXX2 1392 aa12.52□□□□□ -0.41
NUDCD3-209ENST00000487118 FAM135AQ9P2D6 1515 aa12.52□□□□□ -0.41
NUDCD3-209ENST00000487118 FRMPD1Q5SYB0 1578 aa12.52□□□□□ -0.41
NUDCD3-209ENST00000487118 DEPDC5O75140 1603 aa12.51□□□□□ -0.41
NUDCD3-209ENST00000487118 SIGLEC1Q9BZZ2 1709 aa12.51□□□□□ -0.41
NUDCD3-209ENST00000487118 ARID4BQ4LE39 1312 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-209ENST00000487118 ZMYM4Q5VZL5 1548 aa12.51□□□□□ -0.41
NUDCD3-209ENST00000487118 PHF23Q9BUL5 403 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-209ENST00000487118 ABCA6Q8N139 1617 aa12.5□□□□□ -0.41
NUDCD3-209ENST00000487118 A2MP01023 1474 aa12.49□□□□□ -0.41
NUDCD3-209ENST00000487118 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
NUDCD3-209ENST00000487118 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
NUDCD3-209ENST00000487118 RPRD2Q5VT52 1461 aaKnown RBP12.47□□□□□ -0.41
NUDCD3-209ENST00000487118 NEUROD1Q13562 356 aa12.47□□□□□ -0.41
NUDCD3-209ENST00000487118 PKD2Q13563 968 aa12.47□□□□□ -0.41
NUDCD3-209ENST00000487118 MROH1Q8NDA8 1641 aa12.47□□□□□ -0.41
NUDCD3-209ENST00000487118 RNF17Q9BXT8 1623 aaKnown RBP12.47□□□□□ -0.41
NUDCD3-209ENST00000487118 PRDM15P57071 1507 aaPredicted RBP12.47□□□□□ -0.41
NUDCD3-209ENST00000487118 FOXD1Q16676 465 aa12.46□□□□□ -0.41
NUDCD3-209ENST00000487118 TONSLQ96HA7 1378 aa12.44□□□□□ -0.42
NUDCD3-209ENST00000487118 MYT1LQ9UL68 1186 aa12.44□□□□□ -0.42
NUDCD3-209ENST00000487118 MLECQ14165 292 aa12.43□□□□□ -0.42
NUDCD3-209ENST00000487118 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
NUDCD3-209ENST00000487118 LMTK2Q8IWU2 1503 aa12.42□□□□□ -0.42
NUDCD3-209ENST00000487118 TET3O43151 1660 aa12.42□□□□□ -0.42
NUDCD3-209ENST00000487118 ATP10AO60312 1499 aa12.42□□□□□ -0.42
NUDCD3-209ENST00000487118 PPP1R15AO75807 674 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-209ENST00000487118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.42□□□□□ -0.421e-6■□□□□ 9.5
NUDCD3-209ENST00000487118 YEATS2Q9ULM3 1422 aa12.42□□□□□ -0.42
NUDCD3-209ENST00000487118 KIF3BO15066 747 aa12.41□□□□□ -0.42
NUDCD3-209ENST00000487118 KANK1Q14678 1352 aa12.41□□□□□ -0.42
NUDCD3-209ENST00000487118 MED1Q15648 1581 aaPredicted RBP12.4□□□□□ -0.42
NUDCD3-209ENST00000487118 FER1L4A9Z1Z3 1794 aa12.4□□□□□ -0.42
NUDCD3-209ENST00000487118 PLA2R1Q13018 1463 aa12.4□□□□□ -0.43
NUDCD3-209ENST00000487118 E9PCH4 1651 aa12.39□□□□□ -0.43
NUDCD3-209ENST00000487118 UBAP1LF5GYI3 381 aa12.39□□□□□ -0.43
NUDCD3-209ENST00000487118 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-209ENST00000487118 AGLP35573 1532 aa12.37□□□□□ -0.43
NUDCD3-209ENST00000487118 EFCAB6Q5THR3 1501 aa12.37□□□□□ -0.43
NUDCD3-209ENST00000487118 ARHGEF40Q8TER5 1519 aa12.37□□□□□ -0.43
NUDCD3-209ENST00000487118 STRCQ7RTU9 1775 aa12.37□□□□□ -0.43
NUDCD3-209ENST00000487118 PTPRTO14522 1441 aa12.37□□□□□ -0.43
NUDCD3-209ENST00000487118 CEBPAP49715 358 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-209ENST00000487118 L3MBTL2Q969R5 705 aa12.36□□□□□ -0.43
NUDCD3-209ENST00000487118 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
NUDCD3-209ENST00000487118 TRPM2O94759 1503 aa12.36□□□□□ -0.43
NUDCD3-209ENST00000487118 CEP152O94986 1710 aa12.35□□□□□ -0.43
NUDCD3-209ENST00000487118 ZNF316A6NFI3 1004 aaPredicted RBP12.35□□□□□ -0.43
NUDCD3-209ENST00000487118 ABCC3O15438 1527 aa12.35□□□□□ -0.43
NUDCD3-209ENST00000487118 SPHKAPQ2M3C7 1700 aa12.34□□□□□ -0.43
NUDCD3-209ENST00000487118 ZC3H13Q5T200 1668 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-209ENST00000487118 CCDC144AA2RUR9 1427 aa12.34□□□□□ -0.43
NUDCD3-209ENST00000487118 CAMSAP1Q5T5Y3 1602 aa12.31□□□□□ -0.44
NUDCD3-209ENST00000487118 PREX1Q8TCU6 1659 aa12.31□□□□□ -0.44
NUDCD3-209ENST00000487118 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
NUDCD3-209ENST00000487118 ARHGAP31Q2M1Z3 1444 aa12.3□□□□□ -0.44
NUDCD3-209ENST00000487118 UHRF1BP1Q6BDS2 1440 aa12.3□□□□□ -0.44
NUDCD3-209ENST00000487118 HSPA1LP34931 641 aa12.3□□□□□ -0.44
NUDCD3-209ENST00000487118 GGT6Q6P531 493 aa12.3□□□□□ -0.44
NUDCD3-209ENST00000487118 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
NUDCD3-209ENST00000487118 NPATQ14207 1427 aa12.29□□□□□ -0.44
NUDCD3-209ENST00000487118 SPATA31E1Q6ZUB1 1445 aa12.29□□□□□ -0.44
NUDCD3-209ENST00000487118 SENP3Q9H4L4 574 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-209ENST00000487118 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
NUDCD3-209ENST00000487118 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.44
NUDCD3-209ENST00000487118 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
NUDCD3-209ENST00000487118 NBPF8Q3BBV2 869 aa12.27□□□□□ -0.45
NUDCD3-209ENST00000487118 WASHC2CQ9Y4E1 1318 aa12.27□□□□□ -0.45
NUDCD3-209ENST00000487118 NOS1P29475 1434 aa12.27□□□□□ -0.45
NUDCD3-209ENST00000487118 CNTLNQ9NXG0 1405 aa12.27□□□□□ -0.45
NUDCD3-209ENST00000487118 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
NUDCD3-209ENST00000487118 C3P01024 1663 aa12.23□□□□□ -0.45
NUDCD3-209ENST00000487118 PIK3C2BO00750 1634 aa12.23□□□□□ -0.45
NUDCD3-209ENST00000487118 UGGT1Q9NYU2 1555 aa12.23□□□□□ -0.45
NUDCD3-209ENST00000487118 SYNMO15061 1565 aa12.22□□□□□ -0.45
NUDCD3-209ENST00000487118 ADGRB3O60242 1522 aa12.22□□□□□ -0.45
NUDCD3-209ENST00000487118 PRAG1Q86YV5 1406 aa12.22□□□□□ -0.45
NUDCD3-209ENST00000487118 KIF1BO60333 1816 aa12.21□□□□□ -0.45
NUDCD3-209ENST00000487118 DCAF11Q8TEB1 546 aa12.21□□□□□ -0.45
NUDCD3-209ENST00000487118 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
NUDCD3-209ENST00000487118 CLTCQ00610 1675 aaKnown RBP12.21□□□□□ -0.45
NUDCD3-209ENST00000487118 LTBP4Q8N2S1 1624 aa12.21□□□□□ -0.46
NUDCD3-209ENST00000487118 TRPM1Q7Z4N2 1603 aa12.2□□□□□ -0.46
NUDCD3-209ENST00000487118 MROH2AA6NES4 1674 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms