RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 KANK1Q14678 1352 aa23.21■■□□□ 1.31
HDHD3-203ENST00000485934 ANKRD50Q9ULJ7 1429 aa23.21■■□□□ 1.31
HDHD3-203ENST00000485934 FAM135AQ9P2D6 1515 aa23.21■■□□□ 1.31
HDHD3-203ENST00000485934 ZMYM3Q14202 1370 aa23.2■■□□□ 1.3
HDHD3-203ENST00000485934 EIF2AK4Q9P2K8 1649 aaKnown RBP23.19■■□□□ 1.3
HDHD3-203ENST00000485934 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
HDHD3-203ENST00000485934 FER1L4A9Z1Z3 1794 aa23.17■■□□□ 1.3
HDHD3-203ENST00000485934 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
HDHD3-203ENST00000485934 CEBPAP49715 358 aaPredicted RBP23.16■■□□□ 1.3
HDHD3-203ENST00000485934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
HDHD3-203ENST00000485934 KDM5DQ9BY66 1539 aa23.13■■□□□ 1.29
HDHD3-203ENST00000485934 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
HDHD3-203ENST00000485934 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
HDHD3-203ENST00000485934 NPATQ14207 1427 aa23.1■■□□□ 1.29
HDHD3-203ENST00000485934 MROH2AA6NES4 1674 aa23.07■■□□□ 1.28
HDHD3-203ENST00000485934 HFM1A2PYH4 1435 aa23.06■■□□□ 1.28
HDHD3-203ENST00000485934 PRDM15P57071 1507 aaPredicted RBP23.05■■□□□ 1.28
HDHD3-203ENST00000485934 CLTCQ00610 1675 aaKnown RBP23.03■■□□□ 1.28
HDHD3-203ENST00000485934 ABCC3O15438 1527 aa23.03■■□□□ 1.28
HDHD3-203ENST00000485934 NAIPQ13075 1403 aa23.03■■□□□ 1.28
HDHD3-203ENST00000485934 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
HDHD3-203ENST00000485934 PZPP20742 1482 aa23.02■■□□□ 1.28
HDHD3-203ENST00000485934 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
HDHD3-203ENST00000485934 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
HDHD3-203ENST00000485934 NUP155O75694 1391 aa23.01■■□□□ 1.27
HDHD3-203ENST00000485934 DEPDC5O75140 1603 aa23■■□□□ 1.27
HDHD3-203ENST00000485934 MROH1Q8NDA8 1641 aa22.99■■□□□ 1.27
HDHD3-203ENST00000485934 C3P01024 1663 aa22.99■■□□□ 1.27
HDHD3-203ENST00000485934 LMTK2Q8IWU2 1503 aa22.98■■□□□ 1.27
HDHD3-203ENST00000485934 FBXO31Q5XUX0 539 aaPredicted RBP22.98■■□□□ 1.27
HDHD3-203ENST00000485934 SETD1BQ9UPS6 1966 aaKnown RBP22.98■■□□□ 1.27
HDHD3-203ENST00000485934 TNRQ92752 1358 aa22.97■■□□□ 1.27
HDHD3-203ENST00000485934 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
HDHD3-203ENST00000485934 VWDEQ8N2E2 1590 aa22.95■■□□□ 1.26
HDHD3-203ENST00000485934 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
HDHD3-203ENST00000485934 RPRD2Q5VT52 1461 aaKnown RBP22.92■■□□□ 1.26
HDHD3-203ENST00000485934 UNC13BO14795 1591 aa22.91■■□□□ 1.26
HDHD3-203ENST00000485934 SETD5Q9C0A6 1442 aa22.91■■□□□ 1.26
HDHD3-203ENST00000485934 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.25
HDHD3-203ENST00000485934 SLC52A1Q9NWF4 448 aa22.89■■□□□ 1.25
HDHD3-203ENST00000485934 NLRP1Q9C000 1473 aa22.89■■□□□ 1.25
HDHD3-203ENST00000485934 CAMSAP1Q5T5Y3 1602 aa22.89■■□□□ 1.25
HDHD3-203ENST00000485934 GCC2Q8IWJ2 1684 aa22.88■■□□□ 1.25
HDHD3-203ENST00000485934 PREX1Q8TCU6 1659 aa22.88■■□□□ 1.25
HDHD3-203ENST00000485934 ERVK-7P63135 1459 aa22.88■■□□□ 1.25
HDHD3-203ENST00000485934 HRCP23327 699 aa22.88■■□□□ 1.25
HDHD3-203ENST00000485934 HSPA2P54652 639 aa22.87■■□□□ 1.25
HDHD3-203ENST00000485934 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
HDHD3-203ENST00000485934 SPATA31D1Q6ZQQ2 1576 aa22.85■■□□□ 1.25
HDHD3-203ENST00000485934 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
HDHD3-203ENST00000485934 EFCAB6Q5THR3 1501 aa22.85■■□□□ 1.25
HDHD3-203ENST00000485934 CEP152O94986 1710 aa22.85■■□□□ 1.25
HDHD3-203ENST00000485934 A2ML1A8K2U0 1454 aa22.85■■□□□ 1.25
HDHD3-203ENST00000485934 STAG3Q9UJ98 1225 aa22.84■■□□□ 1.25
HDHD3-203ENST00000485934 IQGAP3Q86VI3 1631 aa22.83■■□□□ 1.25
HDHD3-203ENST00000485934 TET3O43151 1660 aa22.82■■□□□ 1.24
HDHD3-203ENST00000485934 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
HDHD3-203ENST00000485934 NOS1P29475 1434 aa22.81■■□□□ 1.24
HDHD3-203ENST00000485934 PKD2Q13563 968 aa22.8■■□□□ 1.24
HDHD3-203ENST00000485934 RAB3GAP2Q9H2M9 1393 aa22.78■■□□□ 1.24
HDHD3-203ENST00000485934 IDI1Q13907 227 aa22.78■■□□□ 1.24
HDHD3-203ENST00000485934 CEP170BQ9Y4F5 1589 aaPredicted RBP22.78■■□□□ 1.24
HDHD3-203ENST00000485934 MPHOSPH9Q99550 1183 aa22.77■■□□□ 1.24
HDHD3-203ENST00000485934 MYO3AQ8NEV4 1616 aa22.77■■□□□ 1.24
HDHD3-203ENST00000485934 ANKLE2Q86XL3 938 aa22.76■■□□□ 1.23
HDHD3-203ENST00000485934 UGGT1Q9NYU2 1555 aa22.76■■□□□ 1.23
HDHD3-203ENST00000485934 HDGFP51858 240 aaKnown RBP22.75■■□□□ 1.23
HDHD3-203ENST00000485934 PLA2R1Q13018 1463 aa22.74■■□□□ 1.23
HDHD3-203ENST00000485934 ZNF142P52746 1687 aaPredicted RBP22.72■■□□□ 1.23
HDHD3-203ENST00000485934 EID1Q9Y6B2 187 aa22.72■■□□□ 1.23
HDHD3-203ENST00000485934 PTPRTO14522 1441 aa22.7■■□□□ 1.22
HDHD3-203ENST00000485934 CHGAP10645 457 aaKnown RBP22.68■■□□□ 1.22
HDHD3-203ENST00000485934 E9PCH4 1651 aa22.67■■□□□ 1.22
HDHD3-203ENST00000485934 NCKAP5LQ9HCH0 1330 aa22.66■■□□□ 1.22
HDHD3-203ENST00000485934 CFAP65Q6ZU64 1925 aaKnown RBP22.66■■□□□ 1.22
HDHD3-203ENST00000485934 SYNMO15061 1565 aa22.65■■□□□ 1.22
HDHD3-203ENST00000485934 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
HDHD3-203ENST00000485934 TMEM2Q9UHN6 1383 aa22.64■■□□□ 1.22
HDHD3-203ENST00000485934 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.64■■□□□ 1.21
HDHD3-203ENST00000485934 KDM5AP29375 1690 aaKnown RBP22.6■■□□□ 1.21
HDHD3-203ENST00000485934 FOXD1Q16676 465 aa22.59■■□□□ 1.21
HDHD3-203ENST00000485934 PIK3C2BO00750 1634 aa22.59■■□□□ 1.21
HDHD3-203ENST00000485934 ADGRB3O60242 1522 aa22.58■■□□□ 1.21
HDHD3-203ENST00000485934 SLIT1O75093 1534 aa22.58■■□□□ 1.21
HDHD3-203ENST00000485934 TRPM2O94759 1503 aa22.58■■□□□ 1.21
HDHD3-203ENST00000485934 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.2
HDHD3-203ENST00000485934 CCDC144AA2RUR9 1427 aa22.57■■□□□ 1.2
HDHD3-203ENST00000485934 PPP1R15AO75807 674 aaPredicted RBP22.57■■□□□ 1.2
HDHD3-203ENST00000485934 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
HDHD3-203ENST00000485934 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
HDHD3-203ENST00000485934 SCAF11Q99590 1463 aaKnown RBP22.56■■□□□ 1.2
HDHD3-203ENST00000485934 MED14O60244 1454 aa22.55■■□□□ 1.2
HDHD3-203ENST00000485934 LTKP29376 864 aa22.55■■□□□ 1.2
HDHD3-203ENST00000485934 NPHP4O75161 1426 aaPredicted RBP22.55■■□□□ 1.2
HDHD3-203ENST00000485934 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
HDHD3-203ENST00000485934 RPGRIP1LQ68CZ1 1315 aa22.54■■□□□ 1.2
HDHD3-203ENST00000485934 STRCQ7RTU9 1775 aa22.53■■□□□ 1.2
HDHD3-203ENST00000485934 BCANQ96GW7 911 aa22.53■■□□□ 1.2
HDHD3-203ENST00000485934 RIMS2Q9UQ26 1411 aa22.51■■□□□ 1.19
HDHD3-203ENST00000485934 TMEM131LA2VDJ0 1609 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms