RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
SMARCC1-207ENST00000485833 RBM33Q96EV2 1170 aaKnown RBP11.95□□□□□ -0.5
SMARCC1-207ENST00000485833 MLLT3P42568 568 aaPredicted RBP11.94□□□□□ -0.5
SMARCC1-207ENST00000485833 PPP1R3GB7ZBB8 358 aa11.93□□□□□ -0.5
SMARCC1-207ENST00000485833 TK2O00142 265 aa11.93□□□□□ -0.5
SMARCC1-207ENST00000485833 SEMA3EO15041 775 aa11.93□□□□□ -0.5
SMARCC1-207ENST00000485833 MAP3K7O43318 606 aa11.93□□□□□ -0.5
SMARCC1-207ENST00000485833 OSBPP22059 807 aa11.93□□□□□ -0.5
SMARCC1-207ENST00000485833 C6orf132Q5T0Z8 1188 aa11.93□□□□□ -0.5
SMARCC1-207ENST00000485833 PLSCR2Q9NRY7 297 aa11.93□□□□□ -0.5
SMARCC1-207ENST00000485833 PRIM1P49642 420 aaKnown RBP11.92□□□□□ -0.5
SMARCC1-207ENST00000485833 ADGRD1Q6QNK2 874 aa11.92□□□□□ -0.5
SMARCC1-207ENST00000485833 COL9A1P20849 921 aa11.9□□□□□ -0.5
SMARCC1-207ENST00000485833 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
SMARCC1-207ENST00000485833 SLC4A5Q9BY07 1137 aa11.9□□□□□ -0.5
SMARCC1-207ENST00000485833 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
SMARCC1-207ENST00000485833 VPS9D1Q9Y2B5 631 aa11.88□□□□□ -0.51
SMARCC1-207ENST00000485833 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
SMARCC1-207ENST00000485833 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
SMARCC1-207ENST00000485833 HRO43593 1189 aa11.85□□□□□ -0.51
SMARCC1-207ENST00000485833 PROX2Q3B8N5 592 aa11.83□□□□□ -0.52
SMARCC1-207ENST00000485833 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
SMARCC1-207ENST00000485833 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
SMARCC1-207ENST00000485833 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
SMARCC1-207ENST00000485833 SMYD5Q6GMV2 418 aa11.82□□□□□ -0.52
SMARCC1-207ENST00000485833 CERKQ8TCT0 537 aa11.82□□□□□ -0.52
SMARCC1-207ENST00000485833 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
SMARCC1-207ENST00000485833 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
SMARCC1-207ENST00000485833 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
SMARCC1-207ENST00000485833 RNF166Q96A37 237 aaPredicted RBP11.78□□□□□ -0.52
SMARCC1-207ENST00000485833 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
SMARCC1-207ENST00000485833 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
SMARCC1-207ENST00000485833 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
SMARCC1-207ENST00000485833 PRSS12P56730 875 aa11.75□□□□□ -0.53
SMARCC1-207ENST00000485833 CDCA7LQ96GN5 454 aa11.75□□□□□ -0.53
SMARCC1-207ENST00000485833 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
SMARCC1-207ENST00000485833 NUTM2FA1L443 756 aa11.74□□□□□ -0.53
SMARCC1-207ENST00000485833 MRPL50Q8N5N7 158 aaKnown RBP11.74□□□□□ -0.53
SMARCC1-207ENST00000485833 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
SMARCC1-207ENST00000485833 RBM27Q9P2N5 1060 aaKnown RBP11.74□□□□□ -0.53
SMARCC1-207ENST00000485833 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
SMARCC1-207ENST00000485833 RBM26Q5T8P6 1007 aaKnown RBP11.73□□□□□ -0.53
SMARCC1-207ENST00000485833 PTGDRQ13258 359 aa11.72□□□□□ -0.53
SMARCC1-207ENST00000485833 PACS2Q86VP3 889 aa11.71□□□□□ -0.53
SMARCC1-207ENST00000485833 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
SMARCC1-207ENST00000485833 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
SMARCC1-207ENST00000485833 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
SMARCC1-207ENST00000485833 LAPTM4BQ86VI4 370 aa11.69□□□□□ -0.54
SMARCC1-207ENST00000485833 FCHSD2O94868 740 aa11.68□□□□□ -0.54
SMARCC1-207ENST00000485833 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
SMARCC1-207ENST00000485833 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
SMARCC1-207ENST00000485833 TTC13Q8NBP0 860 aa11.67□□□□□ -0.54
SMARCC1-207ENST00000485833 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
SMARCC1-207ENST00000485833 KCTD12Q96CX2 325 aaKnown RBP11.66□□□□□ -0.54
SMARCC1-207ENST00000485833 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
SMARCC1-207ENST00000485833 GPIHBP1Q8IV16 184 aa11.64□□□□□ -0.55
SMARCC1-207ENST00000485833 PNMA3Q9UL41 463 aa11.64□□□□□ -0.55
SMARCC1-207ENST00000485833 GPR37O15354 613 aa11.63□□□□□ -0.55
SMARCC1-207ENST00000485833 HIC1Q14526 733 aa11.63□□□□□ -0.55
SMARCC1-207ENST00000485833 TATDN2Q93075 761 aa11.63□□□□□ -0.55
SMARCC1-207ENST00000485833 WNT2BQ93097 391 aa11.63□□□□□ -0.55
SMARCC1-207ENST00000485833 C3orf80F5H4A9 247 aa11.62□□□□□ -0.55
SMARCC1-207ENST00000485833 ZFRQ96KR1 1074 aaKnown RBP11.62□□□□□ -0.55
SMARCC1-207ENST00000485833 SMAPO00193 183 aa11.61□□□□□ -0.55
SMARCC1-207ENST00000485833 NUDT18Q6ZVK8 323 aa11.61□□□□□ -0.55
SMARCC1-207ENST00000485833 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
SMARCC1-207ENST00000485833 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
SMARCC1-207ENST00000485833 GNPATO15228 680 aa11.58□□□□□ -0.56
SMARCC1-207ENST00000485833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMARCC1-207ENST00000485833 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
SMARCC1-207ENST00000485833 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
SMARCC1-207ENST00000485833 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
SMARCC1-207ENST00000485833 SOWAHBA6NEL2 793 aa11.55□□□□□ -0.56
SMARCC1-207ENST00000485833 FECHP22830 423 aa11.54□□□□□ -0.56
SMARCC1-207ENST00000485833 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
SMARCC1-207ENST00000485833 EYA1Q99502 592 aa11.54□□□□□ -0.56
SMARCC1-207ENST00000485833 BCAMP50895 628 aa11.53□□□□□ -0.56
SMARCC1-207ENST00000485833 PTPN5P54829 565 aa11.53□□□□□ -0.56
SMARCC1-207ENST00000485833 RBM46Q8TBY0 533 aaKnown RBP11.53□□□□□ -0.56
SMARCC1-207ENST00000485833 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.53□□□□□ -0.56
SMARCC1-207ENST00000485833 FAM161AQ3B820 660 aa11.52□□□□□ -0.57
SMARCC1-207ENST00000485833 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
SMARCC1-207ENST00000485833 OATP04181 439 aa11.48□□□□□ -0.57
SMARCC1-207ENST00000485833 DNAJB2P25686 324 aa11.48□□□□□ -0.57
SMARCC1-207ENST00000485833 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
SMARCC1-207ENST00000485833 BCANQ96GW7 911 aa11.48□□□□□ -0.57
SMARCC1-207ENST00000485833 PXYLP1Q8TE99 480 aa11.47□□□□□ -0.57
SMARCC1-207ENST00000485833 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
SMARCC1-207ENST00000485833 SWT1Q5T5J6 900 aaKnown RBP11.46□□□□□ -0.57
SMARCC1-207ENST00000485833 METTL3Q86U44 580 aaKnown RBP11.46□□□□□ -0.57
SMARCC1-207ENST00000485833 TSR3Q9UJK0 312 aaKnown RBP11.46□□□□□ -0.57
SMARCC1-207ENST00000485833 RCCD1A6NED2 376 aa11.45□□□□□ -0.58
SMARCC1-207ENST00000485833 MAP2K5Q13163 448 aa11.45□□□□□ -0.58
SMARCC1-207ENST00000485833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.44□□□□□ -0.58
SMARCC1-207ENST00000485833 TMEM134Q9H6X4 195 aa11.44□□□□□ -0.58
SMARCC1-207ENST00000485833 WBP1LQ9NX94 342 aa11.44□□□□□ -0.58
SMARCC1-207ENST00000485833 RNF40O75150 1001 aa11.43□□□□□ -0.58
SMARCC1-207ENST00000485833 NYAP1Q6ZVC0 841 aa11.43□□□□□ -0.58
SMARCC1-207ENST00000485833 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
SMARCC1-207ENST00000485833 SLC4A3P48751 1232 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms