RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 APLP2Q06481 763 aa26.99■■□□□ 1.91
SMC4-216ENST00000485645 CEP170BQ9Y4F5 1589 aaPredicted RBP26.99■■□□□ 1.91
SMC4-216ENST00000485645 NCKAP5LQ9HCH0 1330 aa26.98■■□□□ 1.91
SMC4-216ENST00000485645 KDM5DQ9BY66 1539 aa26.97■■□□□ 1.91
SMC4-216ENST00000485645 FAM135AQ9P2D6 1515 aa26.97■■□□□ 1.91
SMC4-216ENST00000485645 PLA2R1Q13018 1463 aa26.95■■□□□ 1.91
SMC4-216ENST00000485645 PKD2Q13563 968 aa26.95■■□□□ 1.9
SMC4-216ENST00000485645 MAST1Q9Y2H9 1570 aa26.95■■□□□ 1.9
SMC4-216ENST00000485645 FBXO31Q5XUX0 539 aaPredicted RBP26.94■■□□□ 1.9
SMC4-216ENST00000485645 A2ML1A8K2U0 1454 aa26.93■■□□□ 1.9
SMC4-216ENST00000485645 PZPP20742 1482 aa26.93■■□□□ 1.9
SMC4-216ENST00000485645 LTBP4Q8N2S1 1624 aa26.91■■□□□ 1.9
SMC4-216ENST00000485645 TNRQ92752 1358 aa26.91■■□□□ 1.9
SMC4-216ENST00000485645 TCOF1Q13428 1488 aaKnown RBP26.89■■□□□ 1.9
SMC4-216ENST00000485645 DNMT1P26358 1616 aaKnown RBP26.87■■□□□ 1.89
SMC4-216ENST00000485645 RNF17Q9BXT8 1623 aaKnown RBP26.85■■□□□ 1.89
SMC4-216ENST00000485645 EIF2AK4Q9P2K8 1649 aaKnown RBP26.83■■□□□ 1.89
SMC4-216ENST00000485645 IQSEC2Q5JU85 1478 aa26.82■■□□□ 1.88
SMC4-216ENST00000485645 ZNF335Q9H4Z2 1342 aaPredicted RBP26.82■■□□□ 1.88
SMC4-216ENST00000485645 DUOX2Q9NRD8 1548 aa26.8■■□□□ 1.88
SMC4-216ENST00000485645 PTPN23Q9H3S7 1636 aa26.8■■□□□ 1.88
SMC4-216ENST00000485645 ABCC3O15438 1527 aa26.8■■□□□ 1.88
SMC4-216ENST00000485645 ABCC5O15440 1437 aa26.79■■□□□ 1.88
SMC4-216ENST00000485645 NLRP1Q9C000 1473 aa26.79■■□□□ 1.88
SMC4-216ENST00000485645 ZC3H13Q5T200 1668 aaKnown RBP26.79■■□□□ 1.88
SMC4-216ENST00000485645 THEMISQ8N1K5 641 aaPredicted RBP26.78■■□□□ 1.88
SMC4-216ENST00000485645 SHANK2Q9UPX8 1470 aa26.77■■□□□ 1.88
SMC4-216ENST00000485645 KIF15Q9NS87 1388 aa26.77■■□□□ 1.88
SMC4-216ENST00000485645 FGD6Q6ZV73 1430 aa26.76■■□□□ 1.87
SMC4-216ENST00000485645 RRP7BPQ9NSQ0 103 aa26.75■■□□□ 1.87
SMC4-216ENST00000485645 CROCC2H7BZ55 1655 aa26.75■■□□□ 1.87
SMC4-216ENST00000485645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.74■■□□□ 1.873e-6■□□□□ 10.4
SMC4-216ENST00000485645 ANKLE2Q86XL3 938 aa26.74■■□□□ 1.87
SMC4-216ENST00000485645 MROH1Q8NDA8 1641 aa26.74■■□□□ 1.87
SMC4-216ENST00000485645 UGGT1Q9NYU2 1555 aa26.74■■□□□ 1.87
SMC4-216ENST00000485645 DAPK1P53355 1430 aa26.73■■□□□ 1.87
SMC4-216ENST00000485645 POLR1AO95602 1720 aaPredicted RBP26.73■■□□□ 1.87
SMC4-216ENST00000485645 ERBINQ96RT1 1412 aa26.72■■□□□ 1.87
SMC4-216ENST00000485645 SPATA31D1Q6ZQQ2 1576 aa26.71■■□□□ 1.87
SMC4-216ENST00000485645 NEURL4Q96JN8 1562 aa26.7■■□□□ 1.86
SMC4-216ENST00000485645 CEP152O94986 1710 aa26.7■■□□□ 1.86
SMC4-216ENST00000485645 ERVK-7P63135 1459 aa26.69■■□□□ 1.86
SMC4-216ENST00000485645 CHIC2Q9UKJ5 165 aa26.67■■□□□ 1.86
SMC4-216ENST00000485645 CFAP65Q6ZU64 1925 aaKnown RBP26.67■■□□□ 1.86
SMC4-216ENST00000485645 PRDM15P57071 1507 aaPredicted RBP26.65■■□□□ 1.86
SMC4-216ENST00000485645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.65■■□□□ 1.861e-7■■■■□ 24.4
SMC4-216ENST00000485645 ANKRD30AQ9BXX3 1397 aa26.65■■□□□ 1.86
SMC4-216ENST00000485645 UBAP1LF5GYI3 381 aa26.64■■□□□ 1.86
SMC4-216ENST00000485645 DEPDC5O75140 1603 aa26.62■■□□□ 1.85
SMC4-216ENST00000485645 NPHP4O75161 1426 aaPredicted RBP26.62■■□□□ 1.85
SMC4-216ENST00000485645 ARHGAP31Q2M1Z3 1444 aa26.62■■□□□ 1.85
SMC4-216ENST00000485645 MED14O60244 1454 aa26.62■■□□□ 1.85
SMC4-216ENST00000485645 KANK1Q14678 1352 aa26.61■■□□□ 1.85
SMC4-216ENST00000485645 CPS1P31327 1500 aa26.59■■□□□ 1.85
SMC4-216ENST00000485645 FAM50AQ14320 339 aaKnown RBP26.58■■□□□ 1.85
SMC4-216ENST00000485645 IQGAP1P46940 1657 aa26.54■■□□□ 1.84
SMC4-216ENST00000485645 UBR1Q8IWV7 1749 aa26.54■■□□□ 1.84
SMC4-216ENST00000485645 DISP3Q9P2K9 1392 aa26.54■■□□□ 1.84
SMC4-216ENST00000485645 VWDEQ8N2E2 1590 aa26.54■■□□□ 1.84
SMC4-216ENST00000485645 ADGRL2O95490 1459 aa26.53■■□□□ 1.84
SMC4-216ENST00000485645 LMTK2Q8IWU2 1503 aa26.5■■□□□ 1.83
SMC4-216ENST00000485645 TOM1O60784 492 aa26.49■■□□□ 1.83
SMC4-216ENST00000485645 SCAF11Q99590 1463 aaKnown RBP26.48■■□□□ 1.83
SMC4-216ENST00000485645 TXNDC2Q86VQ3 553 aa26.47■■□□□ 1.83
SMC4-216ENST00000485645 STAG3Q9UJ98 1225 aa26.47■■□□□ 1.83
SMC4-216ENST00000485645 SLIT1O75093 1534 aa26.46■■□□□ 1.83
SMC4-216ENST00000485645 LTKP29376 864 aa26.46■■□□□ 1.83
SMC4-216ENST00000485645 EID1Q9Y6B2 187 aa26.46■■□□□ 1.83
SMC4-216ENST00000485645 ARHGAP23Q9P227 1491 aa26.46■■□□□ 1.83
SMC4-216ENST00000485645 SCAF1Q9H7N4 1312 aaKnown RBP26.45■■□□□ 1.83
SMC4-216ENST00000485645 ANKRD50Q9ULJ7 1429 aa26.45■■□□□ 1.82
SMC4-216ENST00000485645 PIK3C2BO00750 1634 aa26.44■■□□□ 1.82
SMC4-216ENST00000485645 PIP4K2BP78356 416 aa26.44■■□□□ 1.82
SMC4-216ENST00000485645 IDI1Q13907 227 aa26.43■■□□□ 1.82
SMC4-216ENST00000485645 EFCAB6Q5THR3 1501 aa26.41■■□□□ 1.82
SMC4-216ENST00000485645 TMEM2Q9UHN6 1383 aa26.4■■□□□ 1.82
SMC4-216ENST00000485645 STRCP1A6NGW2 1772 aa26.39■■□□□ 1.82
SMC4-216ENST00000485645 NOS1P29475 1434 aa26.39■■□□□ 1.81
SMC4-216ENST00000485645 SYNMO15061 1565 aa26.37■■□□□ 1.81
SMC4-216ENST00000485645 LRRC7Q96NW7 1537 aa26.37■■□□□ 1.81
SMC4-216ENST00000485645 KDM5AP29375 1690 aaKnown RBP26.37■■□□□ 1.81
SMC4-216ENST00000485645 ILDR2Q71H61 639 aa26.36■■□□□ 1.81
SMC4-216ENST00000485645 SLC52A1Q9NWF4 448 aa26.36■■□□□ 1.81
SMC4-216ENST00000485645 HSPA1LP34931 641 aa26.34■■□□□ 1.81
SMC4-216ENST00000485645 RPRD2Q5VT52 1461 aaKnown RBP26.34■■□□□ 1.81
SMC4-216ENST00000485645 ROCK1Q13464 1354 aa26.32■■□□□ 1.8
SMC4-216ENST00000485645 ADGRB3O60242 1522 aa26.29■■□□□ 1.8
SMC4-216ENST00000485645 TET3O43151 1660 aa26.29■■□□□ 1.8
SMC4-216ENST00000485645 PPARGC1BQ86YN6 1023 aaKnown RBP26.29■■□□□ 1.8
SMC4-216ENST00000485645 ALKQ9UM73 1620 aa26.28■■□□□ 1.8
SMC4-216ENST00000485645 ITGAEP38570 1179 aa26.27■■□□□ 1.8
SMC4-216ENST00000485645 UNC13BO14795 1591 aa26.27■■□□□ 1.8
SMC4-216ENST00000485645 GCC2Q8IWJ2 1684 aa26.25■■□□□ 1.79
SMC4-216ENST00000485645 SLC26A8Q96RN1 970 aa26.23■■□□□ 1.79
SMC4-216ENST00000485645 BCANQ96GW7 911 aa26.22■■□□□ 1.79
SMC4-216ENST00000485645 KCNA6P17658 529 aa26.21■■□□□ 1.79
SMC4-216ENST00000485645 SOCS7O14512 581 aa26.2■■□□□ 1.78
SMC4-216ENST00000485645 HDGFP51858 240 aaKnown RBP26.2■■□□□ 1.78
SMC4-216ENST00000485645 XIRP1Q702N8 1843 aaKnown RBP26.18■■□□□ 1.78
SMC4-216ENST00000485645 NUP155O75694 1391 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms