RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 CERKQ8TCT0 537 aa8.14□□□□□ -1.11
FN1-222ENST00000485567 RBM33Q96EV2 1170 aaKnown RBP8.14□□□□□ -1.11
FN1-222ENST00000485567 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
FN1-222ENST00000485567 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
FN1-222ENST00000485567 DOK7Q18PE1 504 aa8.12□□□□□ -1.11
FN1-222ENST00000485567 TMUB1Q9BVT8 246 aa8.12□□□□□ -1.11
FN1-222ENST00000485567 ZSWIM6Q9HCJ5 1215 aa8.12□□□□□ -1.11
FN1-222ENST00000485567 CLCN1P35523 988 aa8.11□□□□□ -1.11
FN1-222ENST00000485567 TSR1Q2NL82 804 aaKnown RBP8.11□□□□□ -1.11
FN1-222ENST00000485567 GIGYF2Q6Y7W6 1299 aaKnown RBP8.11□□□□□ -1.11
FN1-222ENST00000485567 C6orf132Q5T0Z8 1188 aa8.1□□□□□ -1.11
FN1-222ENST00000485567 ZDHHC16Q969W1 377 aa8.1□□□□□ -1.11
FN1-222ENST00000485567 OATP04181 439 aa8.09□□□□□ -1.11
FN1-222ENST00000485567 HOXB3P14651 431 aaPredicted RBP8.09□□□□□ -1.11
FN1-222ENST00000485567 RBM27Q9P2N5 1060 aaKnown RBP8.09□□□□□ -1.11
FN1-222ENST00000485567 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
FN1-222ENST00000485567 ZNF454Q8N9F8 522 aa8.08□□□□□ -1.12
FN1-222ENST00000485567 TTC13Q8NBP0 860 aa8.08□□□□□ -1.12
FN1-222ENST00000485567 REPIN1Q9BWE0 567 aaKnown RBP8.08□□□□□ -1.12
FN1-222ENST00000485567 GPCPD1Q9NPB8 672 aa8.08□□□□□ -1.12
FN1-222ENST00000485567 POTEJP0CG39 1038 aa8.07□□□□□ -1.12
FN1-222ENST00000485567 MS4A1P11836 297 aa8.07□□□□□ -1.12
FN1-222ENST00000485567 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
FN1-222ENST00000485567 MAMSTRQ6ZN01 415 aa8.07□□□□□ -1.12
FN1-222ENST00000485567 NUDT7P0C024 238 aa8.06□□□□□ -1.12
FN1-222ENST00000485567 ARSIQ5FYB1 569 aa8.06□□□□□ -1.12
FN1-222ENST00000485567 ARXQ96QS3 562 aa8.06□□□□□ -1.12
FN1-222ENST00000485567 PHOX2BQ99453 314 aa8.06□□□□□ -1.12
FN1-222ENST00000485567 MDM2Q00987 491 aaPredicted RBP8.05□□□□□ -1.12
FN1-222ENST00000485567 ZMYND15Q9H091 742 aa8.05□□□□□ -1.12
FN1-222ENST00000485567 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
FN1-222ENST00000485567 PSDA5PKW4 1024 aaPredicted RBP8.04□□□□□ -1.12
FN1-222ENST00000485567 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
FN1-222ENST00000485567 PADI6Q6TGC4 694 aa8.04□□□□□ -1.12
FN1-222ENST00000485567 METTL3Q86U44 580 aaKnown RBP8.04□□□□□ -1.12
FN1-222ENST00000485567 PXYLP1Q8TE99 480 aa8.04□□□□□ -1.12
FN1-222ENST00000485567 ADAM33Q9BZ11 813 aa8.04□□□□□ -1.12
FN1-222ENST00000485567 POTEB2H3BUK9 544 aa8.03□□□□□ -1.12
FN1-222ENST00000485567 PRSS12P56730 875 aa8.03□□□□□ -1.12
FN1-222ENST00000485567 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
FN1-222ENST00000485567 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
FN1-222ENST00000485567 PCMTD1Q96MG8 357 aaPredicted RBP8.03□□□□□ -1.12
FN1-222ENST00000485567 RSPH6AQ9H0K4 717 aa8.03□□□□□ -1.12
FN1-222ENST00000485567 SCUBE2Q9NQ36 999 aa8.03□□□□□ -1.12
FN1-222ENST00000485567 FLIIQ13045 1269 aa8.02□□□□□ -1.13
FN1-222ENST00000485567 ZNF710Q8N1W2 664 aa8.02□□□□□ -1.13
FN1-222ENST00000485567 FAM217BQ9NTX9 383 aaPredicted RBP8.02□□□□□ -1.13
FN1-222ENST00000485567 CDCA7LQ96GN5 454 aa8.01□□□□□ -1.13
FN1-222ENST00000485567 SKIV2LQ15477 1246 aaKnown RBP8□□□□□ -1.13
FN1-222ENST00000485567 FAM161AQ3B820 660 aa8□□□□□ -1.13
FN1-222ENST00000485567 PPP4R3BQ5MIZ7 849 aa8□□□□□ -1.13
FN1-222ENST00000485567 RBM46Q8TBY0 533 aaKnown RBP8□□□□□ -1.13
FN1-222ENST00000485567 LHX6Q9UPM6 363 aa8□□□□□ -1.13
FN1-222ENST00000485567 SUPT5HO00267 1087 aaKnown RBP7.99□□□□□ -1.13
FN1-222ENST00000485567 SNPHO15079 494 aa7.99□□□□□ -1.13
FN1-222ENST00000485567 BEGAINQ9BUH8 593 aa7.99□□□□□ -1.13
FN1-222ENST00000485567 BCL2L12Q9HB09 334 aa7.99□□□□□ -1.13
FN1-222ENST00000485567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.97□□□□□ -1.13
FN1-222ENST00000485567 ONECUT3O60422 494 aaPredicted RBP7.96□□□□□ -1.14
FN1-222ENST00000485567 HOXB1P14653 301 aaPredicted RBP7.96□□□□□ -1.14
FN1-222ENST00000485567 EYA1Q99502 592 aa7.96□□□□□ -1.14
FN1-222ENST00000485567 PPP1R3GB7ZBB8 358 aa7.95□□□□□ -1.14
FN1-222ENST00000485567 COL9A1P20849 921 aa7.95□□□□□ -1.14
FN1-222ENST00000485567 PTPREP23469 700 aa7.95□□□□□ -1.14
FN1-222ENST00000485567 DIXDC1Q155Q3 683 aa7.95□□□□□ -1.14
FN1-222ENST00000485567 FAM198AQ9UFP1 575 aa7.95□□□□□ -1.14
FN1-222ENST00000485567 NLRP7Q8WX94 980 aa7.94□□□□□ -1.14
FN1-222ENST00000485567 RCCD1A6NED2 376 aa7.93□□□□□ -1.14
FN1-222ENST00000485567 HOMEZQ8IX15 550 aa7.93□□□□□ -1.14
FN1-222ENST00000485567 MYSM1Q5VVJ2 828 aa7.92□□□□□ -1.14
FN1-222ENST00000485567 TSKSQ9UJT2 592 aa7.92□□□□□ -1.14
FN1-222ENST00000485567 PACS2Q86VP3 889 aa7.91□□□□□ -1.14
FN1-222ENST00000485567 PROCA1Q8NCQ7 364 aaPredicted RBP7.91□□□□□ -1.14
FN1-222ENST00000485567 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.91□□□□□ -1.14
FN1-222ENST00000485567 TBC1D2Q9BYX2 928 aa7.91□□□□□ -1.14
FN1-222ENST00000485567 A6NJR5 290 aa7.9□□□□□ -1.14
FN1-222ENST00000485567 TRIM6-TRIM34B2RNG4 842 aa7.9□□□□□ -1.14
FN1-222ENST00000485567 NBPF26B4DH59 902 aa7.9□□□□□ -1.14
FN1-222ENST00000485567 DNAJB2P25686 324 aa7.9□□□□□ -1.14
FN1-222ENST00000485567 NUDT18Q6ZVK8 323 aa7.9□□□□□ -1.14
FN1-222ENST00000485567 SULF1Q8IWU6 871 aa7.9□□□□□ -1.14
FN1-222ENST00000485567 POLR3EQ9NVU0 708 aa7.9□□□□□ -1.14
FN1-222ENST00000485567 CD46P15529 392 aa7.89□□□□□ -1.15
FN1-222ENST00000485567 CLK2P49760 499 aaKnown RBP7.89□□□□□ -1.15
FN1-222ENST00000485567 TATDN2Q93075 761 aa7.89□□□□□ -1.15
FN1-222ENST00000485567 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
FN1-222ENST00000485567 PNMA3Q9UL41 463 aa7.88□□□□□ -1.15
FN1-222ENST00000485567 MCM6Q14566 821 aa7.87□□□□□ -1.15
FN1-222ENST00000485567 SPIRE2Q8WWL2 714 aa7.87□□□□□ -1.15
FN1-222ENST00000485567 TMEM134Q9H6X4 195 aa7.87□□□□□ -1.15
FN1-222ENST00000485567 C3orf80F5H4A9 247 aa7.86□□□□□ -1.15
FN1-222ENST00000485567 GJA5P36382 358 aa7.86□□□□□ -1.15
FN1-222ENST00000485567 BANK1Q8NDB2 785 aa7.86□□□□□ -1.15
FN1-222ENST00000485567 KCNH8Q96L42 1107 aa7.86□□□□□ -1.15
FN1-222ENST00000485567 ATP1B4Q9UN42 357 aaPredicted RBP7.86□□□□□ -1.15
FN1-222ENST00000485567 SPTLC1O15269 473 aa7.85□□□□□ -1.15
FN1-222ENST00000485567 PPP2R2DQ66LE6 453 aa7.85□□□□□ -1.15
FN1-222ENST00000485567 RIC3Q7Z5B4 369 aa7.85□□□□□ -1.15
FN1-222ENST00000485567 UBTFP17480 764 aaKnown RBP7.84□□□□□ -1.15
FN1-222ENST00000485567 TMEM259Q4ZIN3 620 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms