RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 FAM135AQ9P2D6 1515 aa40.44■■■■■ 4.06
HLA-F-227ENST00000485513 MAST1Q9Y2H9 1570 aa40.44■■■■■ 4.06
HLA-F-227ENST00000485513 KDM5DQ9BY66 1539 aa40.43■■■■■ 4.06
HLA-F-227ENST00000485513 APLP2Q06481 763 aa40.43■■■■■ 4.06
HLA-F-227ENST00000485513 WASHC2CQ9Y4E1 1318 aa40.39■■■■■ 4.06
HLA-F-227ENST00000485513 PLA2R1Q13018 1463 aa40.36■■■■■ 4.05
HLA-F-227ENST00000485513 NCKAP5LQ9HCH0 1330 aa40.36■■■■■ 4.05
HLA-F-227ENST00000485513 PZPP20742 1482 aa40.34■■■■■ 4.05
HLA-F-227ENST00000485513 A2ML1A8K2U0 1454 aa40.32■■■■■ 4.05
HLA-F-227ENST00000485513 FBXO31Q5XUX0 539 aaPredicted RBP40.32■■■■■ 4.05
HLA-F-227ENST00000485513 PKD2Q13563 968 aa40.3■■■■■ 4.04
HLA-F-227ENST00000485513 TNRQ92752 1358 aa40.3■■■■■ 4.04
HLA-F-227ENST00000485513 RNF17Q9BXT8 1623 aaKnown RBP40.29■■■■■ 4.04
HLA-F-227ENST00000485513 LTBP4Q8N2S1 1624 aa40.27■■■■■ 4.04
HLA-F-227ENST00000485513 TCOF1Q13428 1488 aaKnown RBP40.27■■■■■ 4.04
HLA-F-227ENST00000485513 DNMT1P26358 1616 aaKnown RBP40.27■■■■■ 4.04
HLA-F-227ENST00000485513 EIF2AK4Q9P2K8 1649 aaKnown RBP40.26■■■■■ 4.04
HLA-F-227ENST00000485513 PTPN23Q9H3S7 1636 aa40.24■■■■■ 4.03
HLA-F-227ENST00000485513 DUOX2Q9NRD8 1548 aa40.2■■■■■ 4.03
HLA-F-227ENST00000485513 ZC3H13Q5T200 1668 aaKnown RBP40.19■■■■■ 4.02
HLA-F-227ENST00000485513 CROCC2H7BZ55 1655 aa40.18■■■■■ 4.02
HLA-F-227ENST00000485513 ABCC3O15438 1527 aa40.18■■■■■ 4.02
HLA-F-227ENST00000485513 SHANK2Q9UPX8 1470 aa40.18■■■■■ 4.02
HLA-F-227ENST00000485513 ABCC5O15440 1437 aa40.17■■■■■ 4.02
HLA-F-227ENST00000485513 FGD6Q6ZV73 1430 aa40.16■■■■■ 4.02
HLA-F-227ENST00000485513 MROH1Q8NDA8 1641 aa40.14■■■■■ 4.02
HLA-F-227ENST00000485513 KIF15Q9NS87 1388 aa40.13■■■■■ 4.02
HLA-F-227ENST00000485513 ZNF335Q9H4Z2 1342 aaPredicted RBP40.13■■■■■ 4.01
HLA-F-227ENST00000485513 IQSEC2Q5JU85 1478 aa40.13■■■■■ 4.01
HLA-F-227ENST00000485513 NLRP1Q9C000 1473 aa40.13■■■■■ 4.01
HLA-F-227ENST00000485513 DAPK1P53355 1430 aa40.1■■■■■ 4.01
HLA-F-227ENST00000485513 POLR1AO95602 1720 aaPredicted RBP40.08■■■■■ 4.01
HLA-F-227ENST00000485513 RRP7BPQ9NSQ0 103 aa40.08■■■■■ 4.01
HLA-F-227ENST00000485513 CEP152O94986 1710 aa40.06■■■■■ 4
HLA-F-227ENST00000485513 THEMISQ8N1K5 641 aaPredicted RBP40.05■■■■■ 4
HLA-F-227ENST00000485513 ERBINQ96RT1 1412 aa40.05■■■■■ 4
HLA-F-227ENST00000485513 SPATA31D1Q6ZQQ2 1576 aa40.05■■■■■ 4
HLA-F-227ENST00000485513 UGGT1Q9NYU2 1555 aa40.05■■■■■ 4
HLA-F-227ENST00000485513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.03■■■■■ 4
HLA-F-227ENST00000485513 ERVK-7P63135 1459 aa40.01■■■■■ 4
HLA-F-227ENST00000485513 NEURL4Q96JN8 1562 aa40.01■■■■□ 3.99
HLA-F-227ENST00000485513 ANKLE2Q86XL3 938 aa39.99■■■■□ 3.99
HLA-F-227ENST00000485513 PRDM15P57071 1507 aaPredicted RBP39.99■■■■□ 3.99
HLA-F-227ENST00000485513 CFAP65Q6ZU64 1925 aaKnown RBP39.97■■■■□ 3.99
HLA-F-227ENST00000485513 ANKRD30AQ9BXX3 1397 aa39.96■■■■□ 3.99
HLA-F-227ENST00000485513 CHIC2Q9UKJ5 165 aa39.95■■■■□ 3.99
HLA-F-227ENST00000485513 DEPDC5O75140 1603 aa39.91■■■■□ 3.98
HLA-F-227ENST00000485513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.91■■■■□ 3.98
HLA-F-227ENST00000485513 ARHGAP31Q2M1Z3 1444 aa39.9■■■■□ 3.98
HLA-F-227ENST00000485513 KANK1Q14678 1352 aa39.86■■■■□ 3.97
HLA-F-227ENST00000485513 MED14O60244 1454 aa39.86■■■■□ 3.97
HLA-F-227ENST00000485513 NPHP4O75161 1426 aaPredicted RBP39.85■■■■□ 3.97
HLA-F-227ENST00000485513 FAM50AQ14320 339 aaKnown RBP39.85■■■■□ 3.97
HLA-F-227ENST00000485513 UBAP1LF5GYI3 381 aa39.82■■■■□ 3.97
HLA-F-227ENST00000485513 ADGRL2O95490 1459 aa39.81■■■■□ 3.96
HLA-F-227ENST00000485513 UBR1Q8IWV7 1749 aa39.8■■■■□ 3.96
HLA-F-227ENST00000485513 CPS1P31327 1500 aa39.8■■■■□ 3.96
HLA-F-227ENST00000485513 IQGAP1P46940 1657 aa39.78■■■■□ 3.96
HLA-F-227ENST00000485513 VWDEQ8N2E2 1590 aa39.76■■■■□ 3.96
HLA-F-227ENST00000485513 LMTK2Q8IWU2 1503 aa39.75■■■■□ 3.95
HLA-F-227ENST00000485513 SCAF11Q99590 1463 aaKnown RBP39.67■■■■□ 3.94
HLA-F-227ENST00000485513 ANKRD50Q9ULJ7 1429 aa39.65■■■■□ 3.94
HLA-F-227ENST00000485513 SLIT1O75093 1534 aa39.65■■■■□ 3.94
HLA-F-227ENST00000485513 PIK3C2BO00750 1634 aa39.65■■■■□ 3.94
HLA-F-227ENST00000485513 ARHGAP23Q9P227 1491 aa39.65■■■■□ 3.94
HLA-F-227ENST00000485513 EFCAB6Q5THR3 1501 aa39.63■■■■□ 3.93
HLA-F-227ENST00000485513 DISP3Q9P2K9 1392 aa39.61■■■■□ 3.93
HLA-F-227ENST00000485513 LTKP29376 864 aa39.61■■■■□ 3.93
HLA-F-227ENST00000485513 TXNDC2Q86VQ3 553 aa39.61■■■■□ 3.93
HLA-F-227ENST00000485513 STAG3Q9UJ98 1225 aa39.6■■■■□ 3.93
HLA-F-227ENST00000485513 EID1Q9Y6B2 187 aa39.58■■■■□ 3.93
HLA-F-227ENST00000485513 TOM1O60784 492 aa39.57■■■■□ 3.93
HLA-F-227ENST00000485513 SYNMO15061 1565 aa39.57■■■■□ 3.92
HLA-F-227ENST00000485513 IDI1Q13907 227 aa39.56■■■■□ 3.92
HLA-F-227ENST00000485513 STRCP1A6NGW2 1772 aa39.56■■■■□ 3.92
HLA-F-227ENST00000485513 NOS1P29475 1434 aa39.56■■■■□ 3.92
HLA-F-227ENST00000485513 KDM5AP29375 1690 aaKnown RBP39.55■■■■□ 3.92
HLA-F-227ENST00000485513 TMEM2Q9UHN6 1383 aa39.55■■■■□ 3.92
HLA-F-227ENST00000485513 SCAF1Q9H7N4 1312 aaKnown RBP39.53■■■■□ 3.92
HLA-F-227ENST00000485513 PIP4K2BP78356 416 aa39.51■■■■□ 3.92
HLA-F-227ENST00000485513 RPRD2Q5VT52 1461 aaKnown RBP39.49■■■■□ 3.91
HLA-F-227ENST00000485513 LRRC7Q96NW7 1537 aa39.48■■■■□ 3.91
HLA-F-227ENST00000485513 ROCK1Q13464 1354 aa39.47■■■■□ 3.91
HLA-F-227ENST00000485513 TET3O43151 1660 aa39.46■■■■□ 3.91
HLA-F-227ENST00000485513 SLC52A1Q9NWF4 448 aa39.46■■■■□ 3.91
HLA-F-227ENST00000485513 PPARGC1BQ86YN6 1023 aaKnown RBP39.45■■■■□ 3.91
HLA-F-227ENST00000485513 UNC13BO14795 1591 aa39.44■■■■□ 3.9
HLA-F-227ENST00000485513 ADGRB3O60242 1522 aa39.44■■■■□ 3.9
HLA-F-227ENST00000485513 GCC2Q8IWJ2 1684 aa39.4■■■■□ 3.9
HLA-F-227ENST00000485513 HSPA1LP34931 641 aa39.38■■■■□ 3.89
HLA-F-227ENST00000485513 ITGAEP38570 1179 aa39.38■■■■□ 3.89
HLA-F-227ENST00000485513 ALKQ9UM73 1620 aa39.38■■■■□ 3.89
HLA-F-227ENST00000485513 ILDR2Q71H61 639 aa39.34■■■■□ 3.89
HLA-F-227ENST00000485513 IQGAP3Q86VI3 1631 aa39.29■■■■□ 3.88
HLA-F-227ENST00000485513 E9PCH4 1651 aa39.28■■■■□ 3.88
HLA-F-227ENST00000485513 MYO5BQ9ULV0 1848 aa39.27■■■■□ 3.88
HLA-F-227ENST00000485513 SLC26A8Q96RN1 970 aa39.26■■■■□ 3.88
HLA-F-227ENST00000485513 XIRP1Q702N8 1843 aaKnown RBP39.25■■■■□ 3.87
HLA-F-227ENST00000485513 NUP155O75694 1391 aa39.23■■■■□ 3.87
HLA-F-227ENST00000485513 TMEM131LA2VDJ0 1609 aa39.23■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 549.9 ms