RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RNF17Q9BXT8 1623 aaKnown RBP26.13■■□□□ 1.77
CHMP3-207ENST00000485465 GGT6Q6P531 493 aa26.12■■□□□ 1.77
CHMP3-207ENST00000485465 TRIM52Q96A61 297 aa26.12■■□□□ 1.77
CHMP3-207ENST00000485465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.12■■□□□ 1.77
CHMP3-207ENST00000485465 UNC13BO14795 1591 aa26.12■■□□□ 1.77
CHMP3-207ENST00000485465 DEPDC5O75140 1603 aa26.11■■□□□ 1.77
CHMP3-207ENST00000485465 MROH1Q8NDA8 1641 aa26.09■■□□□ 1.77
CHMP3-207ENST00000485465 NUP155O75694 1391 aa26.08■■□□□ 1.77
CHMP3-207ENST00000485465 MLECQ14165 292 aa26.08■■□□□ 1.77
CHMP3-207ENST00000485465 PRDM15P57071 1507 aaPredicted RBP26.07■■□□□ 1.76
CHMP3-207ENST00000485465 KANK1Q14678 1352 aa26.06■■□□□ 1.76
CHMP3-207ENST00000485465 PPP6R1Q9UPN7 881 aa26.05■■□□□ 1.76
CHMP3-207ENST00000485465 KDM5DQ9BY66 1539 aa26.04■■□□□ 1.76
CHMP3-207ENST00000485465 VWDEQ8N2E2 1590 aa26.03■■□□□ 1.76
CHMP3-207ENST00000485465 IQGAP3Q86VI3 1631 aa26■■□□□ 1.75
CHMP3-207ENST00000485465 PZPP20742 1482 aa26■■□□□ 1.75
CHMP3-207ENST00000485465 WASHC2CQ9Y4E1 1318 aa26■■□□□ 1.75
CHMP3-207ENST00000485465 FAM135AQ9P2D6 1515 aa25.99■■□□□ 1.75
CHMP3-207ENST00000485465 MPHOSPH9Q99550 1183 aa25.98■■□□□ 1.75
CHMP3-207ENST00000485465 SLC4A1APQ9BWU0 796 aaKnown RBP25.97■■□□□ 1.75
CHMP3-207ENST00000485465 ABCC3O15438 1527 aa25.97■■□□□ 1.75
CHMP3-207ENST00000485465 LMTK2Q8IWU2 1503 aa25.97■■□□□ 1.75
CHMP3-207ENST00000485465 ESF1Q9H501 851 aaKnown RBP25.95■■□□□ 1.74
CHMP3-207ENST00000485465 ZC3H13Q5T200 1668 aaKnown RBP25.93■■□□□ 1.74
CHMP3-207ENST00000485465 CEP152O94986 1710 aa25.93■■□□□ 1.74
CHMP3-207ENST00000485465 DHX57Q6P158 1386 aaKnown RBP25.92■■□□□ 1.74
CHMP3-207ENST00000485465 TET3O43151 1660 aa25.9■■□□□ 1.74
CHMP3-207ENST00000485465 CNTLNQ9NXG0 1405 aa25.9■■□□□ 1.74
CHMP3-207ENST00000485465 PKD2Q13563 968 aa25.9■■□□□ 1.74
CHMP3-207ENST00000485465 ADAMTSL3P82987 1691 aa25.9■■□□□ 1.74
CHMP3-207ENST00000485465 CLTCQ00610 1675 aaKnown RBP25.9■■□□□ 1.74
CHMP3-207ENST00000485465 EFCAB6Q5THR3 1501 aa25.88■■□□□ 1.73
CHMP3-207ENST00000485465 CAMSAP1Q5T5Y3 1602 aa25.87■■□□□ 1.73
CHMP3-207ENST00000485465 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
CHMP3-207ENST00000485465 MADDQ8WXG6 1647 aa25.85■■□□□ 1.73
CHMP3-207ENST00000485465 ARHGAP31Q2M1Z3 1444 aa25.85■■□□□ 1.73
CHMP3-207ENST00000485465 ZMYM3Q14202 1370 aa25.84■■□□□ 1.73
CHMP3-207ENST00000485465 FOXD1Q16676 465 aa25.84■■□□□ 1.73
CHMP3-207ENST00000485465 NPATQ14207 1427 aa25.83■■□□□ 1.73
CHMP3-207ENST00000485465 E9PCH4 1651 aa25.83■■□□□ 1.73
CHMP3-207ENST00000485465 MROH2AA6NES4 1674 aa25.82■■□□□ 1.72
CHMP3-207ENST00000485465 RPRD2Q5VT52 1461 aaKnown RBP25.81■■□□□ 1.72
CHMP3-207ENST00000485465 RIMS1Q86UR5 1692 aaKnown RBP25.79■■□□□ 1.72
CHMP3-207ENST00000485465 CCER1Q8TC90 406 aaPredicted RBP25.78■■□□□ 1.72
CHMP3-207ENST00000485465 KDM4FA0A1W2PPD8 638 aa25.76■■□□□ 1.71
CHMP3-207ENST00000485465 CEBPAP49715 358 aaPredicted RBP25.75■■□□□ 1.71
CHMP3-207ENST00000485465 FBXO31Q5XUX0 539 aaPredicted RBP25.75■■□□□ 1.71
CHMP3-207ENST00000485465 PTPRTO14522 1441 aa25.74■■□□□ 1.71
CHMP3-207ENST00000485465 ANKRD30BQ9BXX2 1392 aa25.74■■□□□ 1.71
CHMP3-207ENST00000485465 C3P01024 1663 aa25.73■■□□□ 1.71
CHMP3-207ENST00000485465 PLA2R1Q13018 1463 aa25.72■■□□□ 1.71
CHMP3-207ENST00000485465 NOS1P29475 1434 aa25.72■■□□□ 1.71
CHMP3-207ENST00000485465 ERVK-7P63135 1459 aa25.72■■□□□ 1.71
CHMP3-207ENST00000485465 PTPRMP28827 1452 aa25.71■■□□□ 1.71
CHMP3-207ENST00000485465 PLPPR3Q6T4P5 718 aa25.7■■□□□ 1.7
CHMP3-207ENST00000485465 PREX1Q8TCU6 1659 aa25.7■■□□□ 1.7
CHMP3-207ENST00000485465 SPATA31D1Q6ZQQ2 1576 aa25.69■■□□□ 1.7
CHMP3-207ENST00000485465 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
CHMP3-207ENST00000485465 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
CHMP3-207ENST00000485465 AEBP2Q6ZN18 517 aaPredicted RBP25.68■■□□□ 1.7
CHMP3-207ENST00000485465 TRPM2O94759 1503 aa25.68■■□□□ 1.7
CHMP3-207ENST00000485465 CFAP65Q6ZU64 1925 aaKnown RBP25.67■■□□□ 1.7
CHMP3-207ENST00000485465 SYNMO15061 1565 aa25.65■■□□□ 1.7
CHMP3-207ENST00000485465 TNRQ92752 1358 aa25.64■■□□□ 1.69
CHMP3-207ENST00000485465 CCDC144AA2RUR9 1427 aa25.63■■□□□ 1.69
CHMP3-207ENST00000485465 SIN3AQ96ST3 1273 aa25.61■■□□□ 1.69
CHMP3-207ENST00000485465 SLC52A1Q9NWF4 448 aa25.61■■□□□ 1.69
CHMP3-207ENST00000485465 UGGT1Q9NYU2 1555 aa25.6■■□□□ 1.69
CHMP3-207ENST00000485465 CLTCL1P53675 1640 aa25.59■■□□□ 1.69
CHMP3-207ENST00000485465 IDI1Q13907 227 aa25.58■■□□□ 1.69
CHMP3-207ENST00000485465 PIK3C2BO00750 1634 aa25.57■■□□□ 1.68
CHMP3-207ENST00000485465 NEUROD1Q13562 356 aa25.56■■□□□ 1.68
CHMP3-207ENST00000485465 NLRP1Q9C000 1473 aa25.53■■□□□ 1.68
CHMP3-207ENST00000485465 CHGAP10645 457 aaKnown RBP25.49■■□□□ 1.67
CHMP3-207ENST00000485465 MYO3AQ8NEV4 1616 aa25.48■■□□□ 1.67
CHMP3-207ENST00000485465 SPATA31E1Q6ZUB1 1445 aa25.47■■□□□ 1.67
CHMP3-207ENST00000485465 SETD1BQ9UPS6 1966 aaKnown RBP25.46■■□□□ 1.67
CHMP3-207ENST00000485465 STAG3Q9UJ98 1225 aa25.46■■□□□ 1.67
CHMP3-207ENST00000485465 KIF1BO60333 1816 aa25.46■■□□□ 1.67
CHMP3-207ENST00000485465 A2ML1A8K2U0 1454 aa25.46■■□□□ 1.67
CHMP3-207ENST00000485465 ADGRB3O60242 1522 aa25.45■■□□□ 1.66
CHMP3-207ENST00000485465 TMEM131LA2VDJ0 1609 aa25.45■■□□□ 1.66
CHMP3-207ENST00000485465 NEURL4Q96JN8 1562 aa25.44■■□□□ 1.66
CHMP3-207ENST00000485465 RGL3Q3MIN7 710 aa25.44■■□□□ 1.66
CHMP3-207ENST00000485465 UHRF1BP1Q6BDS2 1440 aa25.44■■□□□ 1.66
CHMP3-207ENST00000485465 CEP170BQ9Y4F5 1589 aaPredicted RBP25.42■■□□□ 1.66
CHMP3-207ENST00000485465 KDM5AP29375 1690 aaKnown RBP25.41■■□□□ 1.66
CHMP3-207ENST00000485465 TONSLQ96HA7 1378 aa25.41■■□□□ 1.66
CHMP3-207ENST00000485465 ZNF326Q5BKZ1 582 aaKnown RBP25.4■■□□□ 1.66
CHMP3-207ENST00000485465 UBR1Q8IWV7 1749 aa25.4■■□□□ 1.66
CHMP3-207ENST00000485465 ZNF142P52746 1687 aaPredicted RBP25.39■■□□□ 1.66
CHMP3-207ENST00000485465 TIMELESSQ9UNS1 1208 aa25.39■■□□□ 1.66
CHMP3-207ENST00000485465 L3MBTL2Q969R5 705 aa25.38■■□□□ 1.65
CHMP3-207ENST00000485465 THEMISQ8N1K5 641 aaPredicted RBP25.37■■□□□ 1.65
CHMP3-207ENST00000485465 RPGRIP1LQ68CZ1 1315 aa25.37■■□□□ 1.65
CHMP3-207ENST00000485465 MYO5BQ9ULV0 1848 aa25.36■■□□□ 1.65
CHMP3-207ENST00000485465 DCAF11Q8TEB1 546 aa25.33■■□□□ 1.65
CHMP3-207ENST00000485465 TMEM2Q9UHN6 1383 aa25.32■■□□□ 1.64
CHMP3-207ENST00000485465 RIMS2Q9UQ26 1411 aa25.31■■□□□ 1.64
CHMP3-207ENST00000485465 NEXMIFQ5QGS0 1516 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms