RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 TMEM121BQ9BXQ6 578 aaPredicted RBP9.3□□□□□ -0.92
NHLRC3-205ENST00000485407 AQRO60306 1485 aaKnown RBP eCLIP9.29□□□□□ -0.92
NHLRC3-205ENST00000485407 SNPHO15079 494 aa9.29□□□□□ -0.92
NHLRC3-205ENST00000485407 MS4A4AQ96JQ5 239 aa9.29□□□□□ -0.92
NHLRC3-205ENST00000485407 PHF8Q9UPP1 1060 aa9.29□□□□□ -0.92
NHLRC3-205ENST00000485407 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
NHLRC3-205ENST00000485407 RSPH6AQ9H0K4 717 aa9.28□□□□□ -0.92
NHLRC3-205ENST00000485407 IL27Q8NEV9 243 aa9.27□□□□□ -0.93
NHLRC3-205ENST00000485407 MFRPQ9BY79 579 aa9.27□□□□□ -0.93
NHLRC3-205ENST00000485407 KIF13AQ9H1H9 1805 aa9.26□□□□□ -0.93
NHLRC3-205ENST00000485407 SYNJ1O43426 1573 aa9.25□□□□□ -0.93
NHLRC3-205ENST00000485407 BARGINQ6ZT62 677 aa9.25□□□□□ -0.93
NHLRC3-205ENST00000485407 PCDH10Q9P2E7 1040 aa9.25□□□□□ -0.93
NHLRC3-205ENST00000485407 CUX1P39880 1505 aa9.25□□□□□ -0.93
NHLRC3-205ENST00000485407 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
NHLRC3-205ENST00000485407 WRNQ14191 1432 aaPredicted RBP eCLIP9.24□□□□□ -0.93
NHLRC3-205ENST00000485407 POLA1P09884 1462 aaPredicted RBP9.24□□□□□ -0.93
NHLRC3-205ENST00000485407 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
NHLRC3-205ENST00000485407 FBXO22Q8NEZ5 403 aa9.24□□□□□ -0.93
NHLRC3-205ENST00000485407 AK7Q96M32 723 aa9.24□□□□□ -0.93
NHLRC3-205ENST00000485407 GPBP1L1Q9HC44 474 aaPredicted RBP9.24□□□□□ -0.93
NHLRC3-205ENST00000485407 PPP1R37O75864 691 aa9.23□□□□□ -0.93
NHLRC3-205ENST00000485407 NLRP6P59044 892 aa9.23□□□□□ -0.93
NHLRC3-205ENST00000485407 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
NHLRC3-205ENST00000485407 ARID3AQ99856 593 aa9.23□□□□□ -0.93
NHLRC3-205ENST00000485407 TOP2BQ02880 1626 aa9.22□□□□□ -0.93
NHLRC3-205ENST00000485407 SOGA1O94964 1423 aa9.22□□□□□ -0.93
NHLRC3-205ENST00000485407 SYNJ2O15056 1496 aa9.21□□□□□ -0.93
NHLRC3-205ENST00000485407 FGD5Q6ZNL6 1462 aa9.21□□□□□ -0.93
NHLRC3-205ENST00000485407 WDR97A6NE52 1622 aa9.21□□□□□ -0.93
NHLRC3-205ENST00000485407 TARBP1Q13395 1621 aaKnown RBP9.21□□□□□ -0.93
NHLRC3-205ENST00000485407 BIVM-ERCC5R4GMW8 1640 aa9.21□□□□□ -0.93
NHLRC3-205ENST00000485407 CHMP7Q8WUX9 453 aaPredicted RBP9.2□□□□□ -0.94
NHLRC3-205ENST00000485407 KDM6BO15054 1643 aa9.2□□□□□ -0.94
NHLRC3-205ENST00000485407 TMEM92Q6UXU6 159 aa9.19□□□□□ -0.94
NHLRC3-205ENST00000485407 NPM2Q86SE8 214 aaKnown RBP9.19□□□□□ -0.94
NHLRC3-205ENST00000485407 PLSCR2Q9NRY7 297 aa9.19□□□□□ -0.94
NHLRC3-205ENST00000485407 ADGRL1O94910 1474 aa9.19□□□□□ -0.94
NHLRC3-205ENST00000485407 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
NHLRC3-205ENST00000485407 KDM4CQ9H3R0 1056 aa9.18□□□□□ -0.94
NHLRC3-205ENST00000485407 ABCA10Q8WWZ4 1543 aa9.17□□□□□ -0.94
NHLRC3-205ENST00000485407 RAD54L2Q9Y4B4 1467 aa9.17□□□□□ -0.94
NHLRC3-205ENST00000485407 HOXB3P14651 431 aaPredicted RBP9.17□□□□□ -0.94
NHLRC3-205ENST00000485407 HRCP23327 699 aa9.17□□□□□ -0.94
NHLRC3-205ENST00000485407 FAM69CQ0P6D2 419 aa9.17□□□□□ -0.94
NHLRC3-205ENST00000485407 SNAPC4Q5SXM2 1469 aa9.16□□□□□ -0.94
NHLRC3-205ENST00000485407 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
NHLRC3-205ENST00000485407 CDAN1Q8IWY9 1227 aa9.16□□□□□ -0.94
NHLRC3-205ENST00000485407 MARVELD3Q96A59 401 aa9.16□□□□□ -0.94
NHLRC3-205ENST00000485407 PDE4AP27815 886 aa9.15□□□□□ -0.94
NHLRC3-205ENST00000485407 ABCC10Q5T3U5 1492 aa9.15□□□□□ -0.95
NHLRC3-205ENST00000485407 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
NHLRC3-205ENST00000485407 TDRD9Q8NDG6 1382 aaKnown RBP9.13□□□□□ -0.95
NHLRC3-205ENST00000485407 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
NHLRC3-205ENST00000485407 MAGI1Q96QZ7 1491 aaPredicted RBP9.13□□□□□ -0.95
NHLRC3-205ENST00000485407 GRIN2BQ13224 1484 aa9.11□□□□□ -0.95
NHLRC3-205ENST00000485407 EMP3P54852 163 aa9.11□□□□□ -0.95
NHLRC3-205ENST00000485407 PDE4DQ08499 809 aa9.11□□□□□ -0.95
NHLRC3-205ENST00000485407 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
NHLRC3-205ENST00000485407 TRIM66O15016 1216 aa9.1□□□□□ -0.95
NHLRC3-205ENST00000485407 DDX27Q96GQ7 796 aaKnown RBP9.1□□□□□ -0.95
NHLRC3-205ENST00000485407 SPATA31D1Q6ZQQ2 1576 aa9.1□□□□□ -0.95
NHLRC3-205ENST00000485407 ABCA5Q8WWZ7 1642 aa9.09□□□□□ -0.95
NHLRC3-205ENST00000485407 ZNF710Q8N1W2 664 aa9.09□□□□□ -0.95
NHLRC3-205ENST00000485407 C1orf115Q9H7X2 142 aa9.09□□□□□ -0.95
NHLRC3-205ENST00000485407 ARIH1Q9Y4X5 557 aaPredicted RBP9.09□□□□□ -0.95
NHLRC3-205ENST00000485407 ARID3CA6NKF2 412 aa9.08□□□□□ -0.96
NHLRC3-205ENST00000485407 MFSD10Q14728 455 aa9.08□□□□□ -0.96
NHLRC3-205ENST00000485407 DIP2BQ9P265 1576 aa9.07□□□□□ -0.96
NHLRC3-205ENST00000485407 KIF27Q86VH2 1401 aa9.07□□□□□ -0.96
NHLRC3-205ENST00000485407 ERICH3Q5RHP9 1530 aa9.07□□□□□ -0.96
NHLRC3-205ENST00000485407 APBB1O00213 710 aa9.07□□□□□ -0.96
NHLRC3-205ENST00000485407 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
NHLRC3-205ENST00000485407 MLLT3P42568 568 aaPredicted RBP9.07□□□□□ -0.96
NHLRC3-205ENST00000485407 ZNF316A6NFI3 1004 aaPredicted RBP9.06□□□□□ -0.96
NHLRC3-205ENST00000485407 PBRM1Q86U86 1689 aa9.06□□□□□ -0.96
NHLRC3-205ENST00000485407 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
NHLRC3-205ENST00000485407 KIF3CO14782 793 aa9.05□□□□□ -0.96
NHLRC3-205ENST00000485407 RIMBP2O15034 1052 aa9.05□□□□□ -0.96
NHLRC3-205ENST00000485407 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
NHLRC3-205ENST00000485407 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
NHLRC3-205ENST00000485407 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
NHLRC3-205ENST00000485407 ZBTB7CA1YPR0 619 aa9.04□□□□□ -0.96
NHLRC3-205ENST00000485407 FAM205CA6NFA0 338 aa9.04□□□□□ -0.96
NHLRC3-205ENST00000485407 PDIA4P13667 645 aaKnown RBP9.04□□□□□ -0.96
NHLRC3-205ENST00000485407 ZSWIM6Q9HCJ5 1215 aa9.04□□□□□ -0.96
NHLRC3-205ENST00000485407 CAMK2BQ13554 666 aa9.03□□□□□ -0.96
NHLRC3-205ENST00000485407 FAM117AQ9C073 453 aa9.03□□□□□ -0.96
NHLRC3-205ENST00000485407 CRISPLD2Q9H0B8 497 aa9.03□□□□□ -0.96
NHLRC3-205ENST00000485407 FHAD1B1AJZ9 1412 aa9.03□□□□□ -0.96
NHLRC3-205ENST00000485407 CEP170Q5SW79 1584 aa9.03□□□□□ -0.96
NHLRC3-205ENST00000485407 IGF1RP08069 1367 aa9.02□□□□□ -0.97
NHLRC3-205ENST00000485407 C2orf72A6NCS6 295 aa9.02□□□□□ -0.97
NHLRC3-205ENST00000485407 FLIIQ13045 1269 aa9.01□□□□□ -0.97
NHLRC3-205ENST00000485407 GPR153Q6NV75 609 aa9.01□□□□□ -0.97
NHLRC3-205ENST00000485407 TSPOAP1O95153 1857 aa9□□□□□ -0.97
NHLRC3-205ENST00000485407 ADAMTS12P58397 1594 aa8.99□□□□□ -0.97
NHLRC3-205ENST00000485407 DDRGK1Q96HY6 314 aa8.99□□□□□ -0.97
NHLRC3-205ENST00000485407 CCDC9Q9Y3X0 531 aaKnown RBP8.99□□□□□ -0.97
NHLRC3-205ENST00000485407 CUL7Q14999 1698 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms