RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CHIC2Q9UKJ5 165 aa27.2■■□□□ 1.94
SREBF1-213ENST00000485080 MROH2AA6NES4 1674 aa27.19■■□□□ 1.94
SREBF1-213ENST00000485080 ROCK1Q13464 1354 aa27.19■■□□□ 1.94
SREBF1-213ENST00000485080 RNF17Q9BXT8 1623 aaKnown RBP27.19■■□□□ 1.94
SREBF1-213ENST00000485080 ZMYM3Q14202 1370 aa27.14■■□□□ 1.94
SREBF1-213ENST00000485080 SETD1BQ9UPS6 1966 aaKnown RBP27.13■■□□□ 1.93
SREBF1-213ENST00000485080 C3P01024 1663 aa27.13■■□□□ 1.93
SREBF1-213ENST00000485080 CEBPAP49715 358 aaPredicted RBP27.11■■□□□ 1.93
SREBF1-213ENST00000485080 CLTCQ00610 1675 aaKnown RBP27.11■■□□□ 1.93
SREBF1-213ENST00000485080 KDM5DQ9BY66 1539 aa27.11■■□□□ 1.93
SREBF1-213ENST00000485080 MROH1Q8NDA8 1641 aa27.09■■□□□ 1.93
SREBF1-213ENST00000485080 NPATQ14207 1427 aa27.08■■□□□ 1.93
SREBF1-213ENST00000485080 WASHC2CQ9Y4E1 1318 aa27.08■■□□□ 1.93
SREBF1-213ENST00000485080 ANKRD50Q9ULJ7 1429 aa27.07■■□□□ 1.92
SREBF1-213ENST00000485080 DEPDC5O75140 1603 aa27.07■■□□□ 1.92
SREBF1-213ENST00000485080 PRDM15P57071 1507 aaPredicted RBP27.06■■□□□ 1.92
SREBF1-213ENST00000485080 ABCC3O15438 1527 aa27.04■■□□□ 1.92
SREBF1-213ENST00000485080 ZC3H13Q5T200 1668 aaKnown RBP27.04■■□□□ 1.92
SREBF1-213ENST00000485080 LMTK3Q96Q04 1460 aa27.03■■□□□ 1.92
SREBF1-213ENST00000485080 ITGAEP38570 1179 aa27.02■■□□□ 1.92
SREBF1-213ENST00000485080 PLPPR3Q6T4P5 718 aa27.02■■□□□ 1.92
SREBF1-213ENST00000485080 PZPP20742 1482 aa27■■□□□ 1.91
SREBF1-213ENST00000485080 PREX1Q8TCU6 1659 aa26.99■■□□□ 1.91
SREBF1-213ENST00000485080 VWDEQ8N2E2 1590 aa26.99■■□□□ 1.91
SREBF1-213ENST00000485080 KANK1Q14678 1352 aa26.97■■□□□ 1.91
SREBF1-213ENST00000485080 LMTK2Q8IWU2 1503 aa26.96■■□□□ 1.91
SREBF1-213ENST00000485080 ARHGAP31Q2M1Z3 1444 aa26.95■■□□□ 1.9
SREBF1-213ENST00000485080 UHRF1BP1Q6BDS2 1440 aa26.95■■□□□ 1.9
SREBF1-213ENST00000485080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.91■■□□□ 1.9
SREBF1-213ENST00000485080 NAIPQ13075 1403 aa26.9■■□□□ 1.9
SREBF1-213ENST00000485080 CAMSAP1Q5T5Y3 1602 aa26.9■■□□□ 1.9
SREBF1-213ENST00000485080 CEP152O94986 1710 aa26.9■■□□□ 1.9
SREBF1-213ENST00000485080 UNC13BO14795 1591 aa26.9■■□□□ 1.9
SREBF1-213ENST00000485080 HFM1A2PYH4 1435 aa26.9■■□□□ 1.9
SREBF1-213ENST00000485080 FBXO31Q5XUX0 539 aaPredicted RBP26.88■■□□□ 1.89
SREBF1-213ENST00000485080 TNRQ92752 1358 aa26.86■■□□□ 1.89
SREBF1-213ENST00000485080 SPATA31D1Q6ZQQ2 1576 aa26.86■■□□□ 1.89
SREBF1-213ENST00000485080 ERVK-7P63135 1459 aa26.84■■□□□ 1.89
SREBF1-213ENST00000485080 GCC2Q8IWJ2 1684 aa26.84■■□□□ 1.89
SREBF1-213ENST00000485080 MYO3AQ8NEV4 1616 aa26.83■■□□□ 1.88
SREBF1-213ENST00000485080 EFCAB6Q5THR3 1501 aa26.82■■□□□ 1.88
SREBF1-213ENST00000485080 ZNF142P52746 1687 aaPredicted RBP26.82■■□□□ 1.88
SREBF1-213ENST00000485080 HSPA2P54652 639 aa26.81■■□□□ 1.88
SREBF1-213ENST00000485080 NLRP1Q9C000 1473 aa26.81■■□□□ 1.88
SREBF1-213ENST00000485080 A2ML1A8K2U0 1454 aa26.8■■□□□ 1.88
SREBF1-213ENST00000485080 RPRD2Q5VT52 1461 aaKnown RBP26.8■■□□□ 1.88
SREBF1-213ENST00000485080 IQGAP3Q86VI3 1631 aa26.79■■□□□ 1.88
SREBF1-213ENST00000485080 CEP170BQ9Y4F5 1589 aaPredicted RBP26.79■■□□□ 1.88
SREBF1-213ENST00000485080 TET3O43151 1660 aa26.79■■□□□ 1.88
SREBF1-213ENST00000485080 NUP155O75694 1391 aa26.78■■□□□ 1.88
SREBF1-213ENST00000485080 NOS1P29475 1434 aa26.74■■□□□ 1.87
SREBF1-213ENST00000485080 CFAP65Q6ZU64 1925 aaKnown RBP26.74■■□□□ 1.87
SREBF1-213ENST00000485080 PLA2R1Q13018 1463 aa26.71■■□□□ 1.87
SREBF1-213ENST00000485080 ACIN1Q9UKV3 1341 aaKnown RBP26.69■■□□□ 1.86
SREBF1-213ENST00000485080 STRCQ7RTU9 1775 aa26.67■■□□□ 1.86
SREBF1-213ENST00000485080 THEMISQ8N1K5 641 aaPredicted RBP26.66■■□□□ 1.86
SREBF1-213ENST00000485080 SLC52A1Q9NWF4 448 aa26.66■■□□□ 1.86
SREBF1-213ENST00000485080 DMRT2Q9Y5R5 561 aa26.65■■□□□ 1.86
SREBF1-213ENST00000485080 SYNMO15061 1565 aa26.65■■□□□ 1.86
SREBF1-213ENST00000485080 UGGT1Q9NYU2 1555 aa26.65■■□□□ 1.86
SREBF1-213ENST00000485080 E9PCH4 1651 aa26.65■■□□□ 1.86
SREBF1-213ENST00000485080 SETD5Q9C0A6 1442 aa26.64■■□□□ 1.85
SREBF1-213ENST00000485080 PKD2Q13563 968 aa26.63■■□□□ 1.85
SREBF1-213ENST00000485080 IDI1Q13907 227 aa26.61■■□□□ 1.85
SREBF1-213ENST00000485080 KDM5AP29375 1690 aaKnown RBP26.6■■□□□ 1.85
SREBF1-213ENST00000485080 PTPRTO14522 1441 aa26.6■■□□□ 1.85
SREBF1-213ENST00000485080 TRIM52Q96A61 297 aa26.58■■□□□ 1.85
SREBF1-213ENST00000485080 UBR1Q8IWV7 1749 aa26.58■■□□□ 1.85
SREBF1-213ENST00000485080 HRCP23327 699 aa26.56■■□□□ 1.84
SREBF1-213ENST00000485080 PIK3C2BO00750 1634 aa26.56■■□□□ 1.84
SREBF1-213ENST00000485080 ANKLE2Q86XL3 938 aa26.53■■□□□ 1.84
SREBF1-213ENST00000485080 NCKAP5LQ9HCH0 1330 aa26.53■■□□□ 1.84
SREBF1-213ENST00000485080 ARHGAP23Q9P227 1491 aa26.53■■□□□ 1.84
SREBF1-213ENST00000485080 SLIT1O75093 1534 aa26.53■■□□□ 1.84
SREBF1-213ENST00000485080 SLC4A1APQ9BWU0 796 aaKnown RBP26.52■■□□□ 1.84
SREBF1-213ENST00000485080 RAB3GAP2Q9H2M9 1393 aa26.52■■□□□ 1.84
SREBF1-213ENST00000485080 ADGRB3O60242 1522 aa26.5■■□□□ 1.83
SREBF1-213ENST00000485080 MED14O60244 1454 aa26.5■■□□□ 1.83
SREBF1-213ENST00000485080 POLR1AO95602 1720 aaPredicted RBP26.48■■□□□ 1.83
SREBF1-213ENST00000485080 SPHKAPQ2M3C7 1700 aa26.48■■□□□ 1.83
SREBF1-213ENST00000485080 TMEM2Q9UHN6 1383 aa26.48■■□□□ 1.83
SREBF1-213ENST00000485080 STAG3Q9UJ98 1225 aa26.48■■□□□ 1.83
SREBF1-213ENST00000485080 NEURL4Q96JN8 1562 aa26.47■■□□□ 1.83
SREBF1-213ENST00000485080 MPHOSPH9Q99550 1183 aa26.47■■□□□ 1.83
SREBF1-213ENST00000485080 TRPM2O94759 1503 aa26.46■■□□□ 1.83
SREBF1-213ENST00000485080 TMEM131LA2VDJ0 1609 aa26.45■■□□□ 1.82
SREBF1-213ENST00000485080 SCAF11Q99590 1463 aaKnown RBP26.43■■□□□ 1.82
SREBF1-213ENST00000485080 LTKP29376 864 aa26.41■■□□□ 1.82
SREBF1-213ENST00000485080 EID1Q9Y6B2 187 aa26.41■■□□□ 1.82
SREBF1-213ENST00000485080 NPHP4O75161 1426 aaPredicted RBP26.4■■□□□ 1.82
SREBF1-213ENST00000485080 TXNDC2Q86VQ3 553 aa26.4■■□□□ 1.82
SREBF1-213ENST00000485080 ZFYVE9O95405 1425 aa26.38■■□□□ 1.81
SREBF1-213ENST00000485080 HDGFP51858 240 aaKnown RBP26.36■■□□□ 1.81
SREBF1-213ENST00000485080 MYO5BQ9ULV0 1848 aa26.35■■□□□ 1.81
SREBF1-213ENST00000485080 CLTCL1P53675 1640 aa26.35■■□□□ 1.81
SREBF1-213ENST00000485080 IQGAP1P46940 1657 aa26.34■■□□□ 1.81
SREBF1-213ENST00000485080 RIMS2Q9UQ26 1411 aa26.32■■□□□ 1.8
SREBF1-213ENST00000485080 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.32■■□□□ 1.8
SREBF1-213ENST00000485080 CHGAP10645 457 aaKnown RBP26.31■■□□□ 1.8
SREBF1-213ENST00000485080 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms