RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
USP16-206ENST00000485067 SHANK2Q9UPX8 1470 aa12.67□□□□□ -0.38
USP16-206ENST00000485067 DEKP35659 375 aaKnown RBP12.67□□□□□ -0.38
USP16-206ENST00000485067 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
USP16-206ENST00000485067 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
USP16-206ENST00000485067 ANKRD30AQ9BXX3 1397 aa12.66□□□□□ -0.38
USP16-206ENST00000485067 CLASP1Q7Z460 1538 aa12.65□□□□□ -0.38
USP16-206ENST00000485067 EIF4G2P78344 907 aaKnown RBP eCLIP12.64□□□□□ -0.39
USP16-206ENST00000485067 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
USP16-206ENST00000485067 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
USP16-206ENST00000485067 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
USP16-206ENST00000485067 PZPP20742 1482 aa12.64□□□□□ -0.39
USP16-206ENST00000485067 TEX14Q8IWB6 1497 aa12.64□□□□□ -0.39
USP16-206ENST00000485067 L3MBTL2Q969R5 705 aa12.63□□□□□ -0.39
USP16-206ENST00000485067 POLR1AO95602 1720 aaPredicted RBP12.62□□□□□ -0.39
USP16-206ENST00000485067 ARHGEF5Q12774 1597 aa12.62□□□□□ -0.39
USP16-206ENST00000485067 SAMD9LQ8IVG5 1584 aa12.62□□□□□ -0.39
USP16-206ENST00000485067 HSPA5P11021 654 aaKnown RBP12.62□□□□□ -0.39
USP16-206ENST00000485067 HSP90B1P14625 803 aaKnown RBP12.62□□□□□ -0.39
USP16-206ENST00000485067 C9orf84Q5VXU9 1444 aa12.61□□□□□ -0.39
USP16-206ENST00000485067 NAP1L5Q96NT1 182 aaPredicted RBP12.61□□□□□ -0.39
USP16-206ENST00000485067 ABCC2Q92887 1545 aa12.61□□□□□ -0.39
USP16-206ENST00000485067 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
USP16-206ENST00000485067 MBD5Q9P267 1494 aa12.61□□□□□ -0.39
USP16-206ENST00000485067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP16-206ENST00000485067 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
USP16-206ENST00000485067 SUPT16HQ9Y5B9 1047 aaKnown RBP12.6□□□□□ -0.39
USP16-206ENST00000485067 ANKRD50Q9ULJ7 1429 aa12.6□□□□□ -0.39
USP16-206ENST00000485067 PREX2Q70Z35 1606 aa12.59□□□□□ -0.39
USP16-206ENST00000485067 KDM5DQ9BY66 1539 aa12.59□□□□□ -0.39
USP16-206ENST00000485067 MSH5O43196 834 aa12.59□□□□□ -0.39
USP16-206ENST00000485067 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
USP16-206ENST00000485067 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
USP16-206ENST00000485067 ZCCHC11Q5TAX3 1644 aaKnown RBP12.57□□□□□ -0.4
USP16-206ENST00000485067 PKD2Q13563 968 aa12.57□□□□□ -0.4
USP16-206ENST00000485067 SYCP2Q9BX26 1530 aa12.57□□□□□ -0.4
USP16-206ENST00000485067 CNTLNQ9NXG0 1405 aa12.57□□□□□ -0.4
USP16-206ENST00000485067 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
USP16-206ENST00000485067 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
USP16-206ENST00000485067 BCCIPQ9P287 314 aaKnown RBP eCLIP12.57□□□□□ -0.4
USP16-206ENST00000485067 ARHGAP5Q13017 1502 aa12.56□□□□□ -0.4
USP16-206ENST00000485067 KIF15Q9NS87 1388 aa12.55□□□□□ -0.4
USP16-206ENST00000485067 SPATA31E1Q6ZUB1 1445 aa12.55□□□□□ -0.4
USP16-206ENST00000485067 NUP155O75694 1391 aa12.54□□□□□ -0.4
USP16-206ENST00000485067 CCDC7Q96M83 1385 aa12.54□□□□□ -0.4
USP16-206ENST00000485067 ARHGEF12Q9NZN5 1544 aa12.54□□□□□ -0.4
USP16-206ENST00000485067 CCDC141Q6ZP82 1450 aa12.54□□□□□ -0.4
USP16-206ENST00000485067 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
USP16-206ENST00000485067 MAST1Q9Y2H9 1570 aa12.53□□□□□ -0.4
USP16-206ENST00000485067 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
USP16-206ENST00000485067 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
USP16-206ENST00000485067 MYO5CQ9NQX4 1742 aa12.52□□□□□ -0.41
USP16-206ENST00000485067 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP16-206ENST00000485067 UHRF1BP1Q6BDS2 1440 aa12.51□□□□□ -0.41
USP16-206ENST00000485067 PLEKHH2Q8IVE3 1493 aa12.5□□□□□ -0.41
USP16-206ENST00000485067 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
USP16-206ENST00000485067 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
USP16-206ENST00000485067 UHRF1BP1LA0JNW5 1464 aa12.48□□□□□ -0.41
USP16-206ENST00000485067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP16-206ENST00000485067 PLXNC1O60486 1568 aa12.47□□□□□ -0.41
USP16-206ENST00000485067 TRAPPC8Q9Y2L5 1435 aa12.47□□□□□ -0.41
USP16-206ENST00000485067 RALGAPBQ86X10 1494 aa12.46□□□□□ -0.41
USP16-206ENST00000485067 UNC13BO14795 1591 aa12.46□□□□□ -0.41
USP16-206ENST00000485067 KDM5CP41229 1560 aa12.46□□□□□ -0.41
USP16-206ENST00000485067 PLCH2O75038 1416 aa12.46□□□□□ -0.41
USP16-206ENST00000485067 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.42
USP16-206ENST00000485067 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
USP16-206ENST00000485067 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
USP16-206ENST00000485067 AFAP1Q8N556 730 aa12.44□□□□□ -0.42
USP16-206ENST00000485067 USP47Q96K76 1375 aa12.44□□□□□ -0.42
USP16-206ENST00000485067 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP16-206ENST00000485067 ABCC1P33527 1531 aa12.42□□□□□ -0.42
USP16-206ENST00000485067 EFCAB2Q5VUJ9 269 aa12.42□□□□□ -0.42
USP16-206ENST00000485067 BCORL1Q5H9F3 1711 aa12.42□□□□□ -0.42
USP16-206ENST00000485067 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
USP16-206ENST00000485067 IQGAP3Q86VI3 1631 aa12.41□□□□□ -0.42
USP16-206ENST00000485067 DUOX2Q9NRD8 1548 aa12.41□□□□□ -0.42
USP16-206ENST00000485067 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP16-206ENST00000485067 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
USP16-206ENST00000485067 NAP1L2Q9ULW6 460 aaPredicted RBP12.4□□□□□ -0.42
USP16-206ENST00000485067 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
USP16-206ENST00000485067 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.42
USP16-206ENST00000485067 IRX6P78412 446 aaPredicted RBP12.4□□□□□ -0.42
USP16-206ENST00000485067 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
USP16-206ENST00000485067 ERBINQ96RT1 1412 aa12.39□□□□□ -0.43
USP16-206ENST00000485067 ARAP3Q8WWN8 1544 aa12.38□□□□□ -0.43
USP16-206ENST00000485067 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
USP16-206ENST00000485067 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
USP16-206ENST00000485067 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
USP16-206ENST00000485067 MAGI2Q86UL8 1455 aa12.38□□□□□ -0.43
USP16-206ENST00000485067 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
USP16-206ENST00000485067 RGL3Q3MIN7 710 aa12.37□□□□□ -0.43
USP16-206ENST00000485067 CARD11Q9BXL7 1154 aa12.37□□□□□ -0.43
USP16-206ENST00000485067 IGSF3O75054 1194 aa12.36□□□□□ -0.43
USP16-206ENST00000485067 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
USP16-206ENST00000485067 MRS2Q9HD23 443 aa12.36□□□□□ -0.43
USP16-206ENST00000485067 DHX29Q7Z478 1369 aaKnown RBP12.36□□□□□ -0.43
USP16-206ENST00000485067 ATP10AO60312 1499 aa12.36□□□□□ -0.43
USP16-206ENST00000485067 LAMC1P11047 1609 aa12.36□□□□□ -0.43
USP16-206ENST00000485067 TRPM1Q7Z4N2 1603 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms