RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 AGLP35573 1532 aa12.03□□□□□ -0.48
MACF1-220ENST00000485063 A2MP01023 1474 aa12.02□□□□□ -0.48
MACF1-220ENST00000485063 TCOF1Q13428 1488 aaKnown RBP12.02□□□□□ -0.49
MACF1-220ENST00000485063 MAST1Q9Y2H9 1570 aa12.01□□□□□ -0.49
MACF1-220ENST00000485063 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
MACF1-220ENST00000485063 FAM50AQ14320 339 aaKnown RBP12.01□□□□□ -0.49
MACF1-220ENST00000485063 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
MACF1-220ENST00000485063 PPARGC1BQ86YN6 1023 aaKnown RBP12□□□□□ -0.49
MACF1-220ENST00000485063 PTPRMP28827 1452 aa12□□□□□ -0.49
MACF1-220ENST00000485063 DNMT1P26358 1616 aaKnown RBP12□□□□□ -0.49
MACF1-220ENST00000485063 PLXNC1O60486 1568 aa11.99□□□□□ -0.49
MACF1-220ENST00000485063 DAPK1P53355 1430 aa11.98□□□□□ -0.49
MACF1-220ENST00000485063 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
MACF1-220ENST00000485063 SHANK2Q9UPX8 1470 aa11.97□□□□□ -0.49
MACF1-220ENST00000485063 ABCC5O15440 1437 aa11.96□□□□□ -0.49
MACF1-220ENST00000485063 GGT6Q6P531 493 aa11.96□□□□□ -0.49
MACF1-220ENST00000485063 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
MACF1-220ENST00000485063 CNTLNQ9NXG0 1405 aa11.95□□□□□ -0.5
MACF1-220ENST00000485063 KIF3BO15066 747 aa11.95□□□□□ -0.5
MACF1-220ENST00000485063 ANKRD30AQ9BXX3 1397 aa11.94□□□□□ -0.5
MACF1-220ENST00000485063 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
MACF1-220ENST00000485063 MROH2AA6NES4 1674 aa11.94□□□□□ -0.5
MACF1-220ENST00000485063 EIF2AK4Q9P2K8 1649 aaKnown RBP11.93□□□□□ -0.5
MACF1-220ENST00000485063 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
MACF1-220ENST00000485063 CLTCQ00610 1675 aaKnown RBP11.93□□□□□ -0.5
MACF1-220ENST00000485063 C3P01024 1663 aa11.92□□□□□ -0.5
MACF1-220ENST00000485063 RRP7BPQ9NSQ0 103 aa11.92□□□□□ -0.5
MACF1-220ENST00000485063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.92□□□□□ -0.5
MACF1-220ENST00000485063 KIF15Q9NS87 1388 aa11.92□□□□□ -0.5
MACF1-220ENST00000485063 ERBINQ96RT1 1412 aa11.9□□□□□ -0.5
MACF1-220ENST00000485063 FAM135AQ9P2D6 1515 aa11.9□□□□□ -0.5
MACF1-220ENST00000485063 SETD1BQ9UPS6 1966 aaKnown RBP11.89□□□□□ -0.51
MACF1-220ENST00000485063 ITGAEP38570 1179 aa11.89□□□□□ -0.51
MACF1-220ENST00000485063 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
MACF1-220ENST00000485063 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
MACF1-220ENST00000485063 WASHC2CQ9Y4E1 1318 aa11.88□□□□□ -0.51
MACF1-220ENST00000485063 ZC3H13Q5T200 1668 aaKnown RBP11.88□□□□□ -0.51
MACF1-220ENST00000485063 PREX1Q8TCU6 1659 aa11.88□□□□□ -0.51
MACF1-220ENST00000485063 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
MACF1-220ENST00000485063 KDM5DQ9BY66 1539 aa11.88□□□□□ -0.51
MACF1-220ENST00000485063 RNF17Q9BXT8 1623 aaKnown RBP11.88□□□□□ -0.51
MACF1-220ENST00000485063 ZMYM3Q14202 1370 aa11.88□□□□□ -0.51
MACF1-220ENST00000485063 RRBP1Q9P2E9 1410 aaKnown RBP11.87□□□□□ -0.51
MACF1-220ENST00000485063 KANK1Q14678 1352 aa11.86□□□□□ -0.51
MACF1-220ENST00000485063 ROCK1Q13464 1354 aa11.85□□□□□ -0.51
MACF1-220ENST00000485063 UHRF1BP1Q6BDS2 1440 aa11.85□□□□□ -0.51
MACF1-220ENST00000485063 CEP152O94986 1710 aa11.84□□□□□ -0.51
MACF1-220ENST00000485063 ABCB7O75027 752 aa11.84□□□□□ -0.51
MACF1-220ENST00000485063 NPATQ14207 1427 aa11.84□□□□□ -0.51
MACF1-220ENST00000485063 DEPDC5O75140 1603 aa11.83□□□□□ -0.52
MACF1-220ENST00000485063 PRDM15P57071 1507 aaPredicted RBP11.83□□□□□ -0.52
MACF1-220ENST00000485063 PTPRKQ15262 1439 aa11.83□□□□□ -0.52
MACF1-220ENST00000485063 ANKRD50Q9ULJ7 1429 aa11.83□□□□□ -0.52
MACF1-220ENST00000485063 LMTK3Q96Q04 1460 aa11.83□□□□□ -0.52
MACF1-220ENST00000485063 MROH1Q8NDA8 1641 aa11.82□□□□□ -0.52
MACF1-220ENST00000485063 ABCC3O15438 1527 aa11.81□□□□□ -0.52
MACF1-220ENST00000485063 CAMSAP1Q5T5Y3 1602 aa11.81□□□□□ -0.52
MACF1-220ENST00000485063 PZPP20742 1482 aa11.81□□□□□ -0.52
MACF1-220ENST00000485063 CFAP65Q6ZU64 1925 aaKnown RBP11.79□□□□□ -0.52
MACF1-220ENST00000485063 MYO3AQ8NEV4 1616 aa11.78□□□□□ -0.52
MACF1-220ENST00000485063 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.53
MACF1-220ENST00000485063 HSPA2P54652 639 aa11.77□□□□□ -0.53
MACF1-220ENST00000485063 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.53
MACF1-220ENST00000485063 TNRQ92752 1358 aa11.77□□□□□ -0.53
MACF1-220ENST00000485063 UNC13BO14795 1591 aa11.76□□□□□ -0.53
MACF1-220ENST00000485063 ZNF142P52746 1687 aaPredicted RBP11.76□□□□□ -0.53
MACF1-220ENST00000485063 FBXO31Q5XUX0 539 aaPredicted RBP11.76□□□□□ -0.53
MACF1-220ENST00000485063 ARHGAP31Q2M1Z3 1444 aa11.76□□□□□ -0.53
MACF1-220ENST00000485063 LMTK2Q8IWU2 1503 aa11.76□□□□□ -0.53
MACF1-220ENST00000485063 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
MACF1-220ENST00000485063 CEP170BQ9Y4F5 1589 aaPredicted RBP11.75□□□□□ -0.53
MACF1-220ENST00000485063 SPATA31D1Q6ZQQ2 1576 aa11.74□□□□□ -0.53
MACF1-220ENST00000485063 TET3O43151 1660 aa11.74□□□□□ -0.53
MACF1-220ENST00000485063 A2ML1A8K2U0 1454 aa11.73□□□□□ -0.53
MACF1-220ENST00000485063 ERVK-7P63135 1459 aa11.73□□□□□ -0.53
MACF1-220ENST00000485063 EFCAB6Q5THR3 1501 aa11.73□□□□□ -0.53
MACF1-220ENST00000485063 NLRP1Q9C000 1473 aa11.73□□□□□ -0.53
MACF1-220ENST00000485063 IQGAP3Q86VI3 1631 aa11.72□□□□□ -0.53
MACF1-220ENST00000485063 HFM1A2PYH4 1435 aa11.72□□□□□ -0.53
MACF1-220ENST00000485063 NAIPQ13075 1403 aa11.72□□□□□ -0.53
MACF1-220ENST00000485063 NUP155O75694 1391 aa11.72□□□□□ -0.53
MACF1-220ENST00000485063 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.53
MACF1-220ENST00000485063 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
MACF1-220ENST00000485063 UGGT1Q9NYU2 1555 aa11.71□□□□□ -0.54
MACF1-220ENST00000485063 THEMISQ8N1K5 641 aaPredicted RBP11.7□□□□□ -0.54
MACF1-220ENST00000485063 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
MACF1-220ENST00000485063 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
MACF1-220ENST00000485063 TRIM52Q96A61 297 aa11.69□□□□□ -0.54
MACF1-220ENST00000485063 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
MACF1-220ENST00000485063 PLA2R1Q13018 1463 aa11.69□□□□□ -0.54
MACF1-220ENST00000485063 PKD2Q13563 968 aa11.68□□□□□ -0.54
MACF1-220ENST00000485063 E9PCH4 1651 aa11.68□□□□□ -0.54
MACF1-220ENST00000485063 POLR1AO95602 1720 aaPredicted RBP11.67□□□□□ -0.54
MACF1-220ENST00000485063 UBR1Q8IWV7 1749 aa11.66□□□□□ -0.54
MACF1-220ENST00000485063 SLC52A1Q9NWF4 448 aa11.66□□□□□ -0.54
MACF1-220ENST00000485063 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.54
MACF1-220ENST00000485063 PIK3C2BO00750 1634 aa11.65□□□□□ -0.54
MACF1-220ENST00000485063 ANKLE2Q86XL3 938 aa11.65□□□□□ -0.54
MACF1-220ENST00000485063 PTPRTO14522 1441 aa11.65□□□□□ -0.54
MACF1-220ENST00000485063 NOS1P29475 1434 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms