RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 DIP2BQ9P265 1576 aa23.83■■□□□ 1.4
CTSA-207ENST00000484855 HECW2Q9P2P5 1572 aa23.82■■□□□ 1.4
CTSA-207ENST00000484855 DHX29Q7Z478 1369 aaKnown RBP23.78■■□□□ 1.4
CTSA-207ENST00000484855 MLH3Q9UHC1 1453 aa23.77■■□□□ 1.39
CTSA-207ENST00000484855 RICTORQ6R327 1708 aa23.75■■□□□ 1.39
CTSA-207ENST00000484855 E9PCH4 1651 aa23.74■■□□□ 1.39
CTSA-207ENST00000484855 TET3O43151 1660 aa23.74■■□□□ 1.39
CTSA-207ENST00000484855 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
CTSA-207ENST00000484855 CCDC144AA2RUR9 1427 aa23.73■■□□□ 1.39
CTSA-207ENST00000484855 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
CTSA-207ENST00000484855 VWDEQ8N2E2 1590 aa23.73■■□□□ 1.39
CTSA-207ENST00000484855 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
CTSA-207ENST00000484855 A2MP01023 1474 aa23.72■■□□□ 1.39
CTSA-207ENST00000484855 MROH1Q8NDA8 1641 aa23.72■■□□□ 1.39
CTSA-207ENST00000484855 PLA2R1Q13018 1463 aa23.71■■□□□ 1.39
CTSA-207ENST00000484855 HIRIP3Q9BW71 556 aaPredicted RBP23.71■■□□□ 1.39
CTSA-207ENST00000484855 FAM69CQ0P6D2 419 aa23.71■■□□□ 1.39
CTSA-207ENST00000484855 NBPF8Q3BBV2 869 aa23.71■■□□□ 1.39
CTSA-207ENST00000484855 KIF3BO15066 747 aa23.7■■□□□ 1.38
CTSA-207ENST00000484855 KANK1Q14678 1352 aa23.7■■□□□ 1.38
CTSA-207ENST00000484855 ATP10AO60312 1499 aa23.7■■□□□ 1.38
CTSA-207ENST00000484855 RNF17Q9BXT8 1623 aaKnown RBP23.69■■□□□ 1.38
CTSA-207ENST00000484855 PPRC1Q5VV67 1664 aaKnown RBP23.69■■□□□ 1.38
CTSA-207ENST00000484855 MIER1Q8N108 512 aa23.69■■□□□ 1.38
CTSA-207ENST00000484855 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
CTSA-207ENST00000484855 SPHKAPQ2M3C7 1700 aa23.68■■□□□ 1.38
CTSA-207ENST00000484855 BCORL1Q5H9F3 1711 aa23.67■■□□□ 1.38
CTSA-207ENST00000484855 RAPGEF3O95398 923 aa23.66■■□□□ 1.38
CTSA-207ENST00000484855 KIF13AQ9H1H9 1805 aa23.65■■□□□ 1.38
CTSA-207ENST00000484855 DIP2CQ9Y2E4 1556 aa23.64■■□□□ 1.38
CTSA-207ENST00000484855 UHRF1BP1Q6BDS2 1440 aa23.63■■□□□ 1.37
CTSA-207ENST00000484855 CEP152O94986 1710 aa23.63■■□□□ 1.37
CTSA-207ENST00000484855 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.37
CTSA-207ENST00000484855 TRPM2O94759 1503 aa23.63■■□□□ 1.37
CTSA-207ENST00000484855 HSPA5P11021 654 aaKnown RBP23.62■■□□□ 1.37
CTSA-207ENST00000484855 ZNF326Q5BKZ1 582 aaKnown RBP23.6■■□□□ 1.37
CTSA-207ENST00000484855 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
CTSA-207ENST00000484855 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
CTSA-207ENST00000484855 ZMYM4Q5VZL5 1548 aa23.58■■□□□ 1.37
CTSA-207ENST00000484855 LMTK2Q8IWU2 1503 aa23.58■■□□□ 1.37
CTSA-207ENST00000484855 PTPRTO14522 1441 aa23.57■■□□□ 1.36
CTSA-207ENST00000484855 DDX10Q13206 875 aaKnown RBP23.57■■□□□ 1.36
CTSA-207ENST00000484855 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
CTSA-207ENST00000484855 CLTCL1P53675 1640 aa23.56■■□□□ 1.36
CTSA-207ENST00000484855 KDM2AQ9Y2K7 1162 aa23.54■■□□□ 1.36
CTSA-207ENST00000484855 POLR1AO95602 1720 aaPredicted RBP23.54■■□□□ 1.36
CTSA-207ENST00000484855 YEATS2Q9ULM3 1422 aa23.52■■□□□ 1.36
CTSA-207ENST00000484855 RGL3Q3MIN7 710 aa23.52■■□□□ 1.36
CTSA-207ENST00000484855 SPATA31E1Q6ZUB1 1445 aa23.52■■□□□ 1.36
CTSA-207ENST00000484855 TRPM1Q7Z4N2 1603 aa23.52■■□□□ 1.36
CTSA-207ENST00000484855 PRAG1Q86YV5 1406 aa23.5■■□□□ 1.35
CTSA-207ENST00000484855 GGT6Q6P531 493 aa23.48■■□□□ 1.35
CTSA-207ENST00000484855 ABCC3O15438 1527 aa23.48■■□□□ 1.35
CTSA-207ENST00000484855 USP47Q96K76 1375 aa23.47■■□□□ 1.35
CTSA-207ENST00000484855 CAMSAP1Q5T5Y3 1602 aa23.47■■□□□ 1.35
CTSA-207ENST00000484855 KIF1BO60333 1816 aa23.47■■□□□ 1.35
CTSA-207ENST00000484855 ZC3H13Q5T200 1668 aaKnown RBP23.47■■□□□ 1.35
CTSA-207ENST00000484855 WASHC2AQ641Q2 1341 aa23.45■■□□□ 1.35
CTSA-207ENST00000484855 CFAP65Q6ZU64 1925 aaKnown RBP23.45■■□□□ 1.34
CTSA-207ENST00000484855 NEURL4Q96JN8 1562 aa23.44■■□□□ 1.34
CTSA-207ENST00000484855 UGGT1Q9NYU2 1555 aa23.43■■□□□ 1.34
CTSA-207ENST00000484855 CARD11Q9BXL7 1154 aa23.42■■□□□ 1.34
CTSA-207ENST00000484855 ROCK2O75116 1388 aaKnown RBP23.42■■□□□ 1.34
CTSA-207ENST00000484855 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
CTSA-207ENST00000484855 NPATQ14207 1427 aa23.41■■□□□ 1.34
CTSA-207ENST00000484855 REREQ9P2R6 1566 aa23.41■■□□□ 1.34
CTSA-207ENST00000484855 LAMC1P11047 1609 aa23.41■■□□□ 1.34
CTSA-207ENST00000484855 MADDQ8WXG6 1647 aa23.4■■□□□ 1.34
CTSA-207ENST00000484855 CCDC7Q96M83 1385 aa23.4■■□□□ 1.34
CTSA-207ENST00000484855 MROH2AA6NES4 1674 aa23.38■■□□□ 1.33
CTSA-207ENST00000484855 SIGLEC1Q9BZZ2 1709 aa23.37■■□□□ 1.33
CTSA-207ENST00000484855 C11orf95C9JLR9 678 aaPredicted RBP23.37■■□□□ 1.33
CTSA-207ENST00000484855 CNTLNQ9NXG0 1405 aa23.35■■□□□ 1.33
CTSA-207ENST00000484855 IFT172Q9UG01 1749 aa23.35■■□□□ 1.33
CTSA-207ENST00000484855 ARHGEF40Q8TER5 1519 aa23.35■■□□□ 1.33
CTSA-207ENST00000484855 GPRASP1Q5JY77 1395 aa23.35■■□□□ 1.33
CTSA-207ENST00000484855 COL17A1Q9UMD9 1497 aaPredicted RBP23.34■■□□□ 1.33
CTSA-207ENST00000484855 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
CTSA-207ENST00000484855 KIF7Q2M1P5 1343 aa23.33■■□□□ 1.33
CTSA-207ENST00000484855 AGLP35573 1532 aa23.33■■□□□ 1.33
CTSA-207ENST00000484855 ADGRB3O60242 1522 aa23.32■■□□□ 1.32
CTSA-207ENST00000484855 ANP32CO43423 234 aa23.32■■□□□ 1.32
CTSA-207ENST00000484855 STAC3Q96MF2 364 aa23.32■■□□□ 1.32
CTSA-207ENST00000484855 ARHGAP31Q2M1Z3 1444 aa23.31■■□□□ 1.32
CTSA-207ENST00000484855 CENPBP07199 599 aaPredicted RBP23.3■■□□□ 1.32
CTSA-207ENST00000484855 NBPF1Q3BBV0 1214 aa23.3■■□□□ 1.32
CTSA-207ENST00000484855 NOS1P29475 1434 aa23.29■■□□□ 1.32
CTSA-207ENST00000484855 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
CTSA-207ENST00000484855 SYNMO15061 1565 aa23.29■■□□□ 1.32
CTSA-207ENST00000484855 KIAA1210Q9ULL0 1709 aa23.28■■□□□ 1.32
CTSA-207ENST00000484855 MYOM2P54296 1465 aa23.28■■□□□ 1.32
CTSA-207ENST00000484855 PREX1Q8TCU6 1659 aa23.27■■□□□ 1.32
CTSA-207ENST00000484855 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
CTSA-207ENST00000484855 PPLO60437 1756 aa23.25■■□□□ 1.31
CTSA-207ENST00000484855 ARID4BQ4LE39 1312 aaPredicted RBP23.25■■□□□ 1.31
CTSA-207ENST00000484855 IQGAP1P46940 1657 aa23.24■■□□□ 1.31
CTSA-207ENST00000484855 CLTCQ00610 1675 aaKnown RBP23.23■■□□□ 1.31
CTSA-207ENST00000484855 CHGAP10645 457 aaKnown RBP23.21■■□□□ 1.31
CTSA-207ENST00000484855 CCER2I3L3R5 266 aa23.19■■□□□ 1.3
CTSA-207ENST00000484855 POLR3GLQ9BT43 218 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms