RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 EIF2AK4Q9P2K8 1649 aaKnown RBP19.3■□□□□ 0.68
RXRB-205ENST00000483821 KIF3BO15066 747 aa19.3■□□□□ 0.68
RXRB-205ENST00000483821 FOXD1Q16676 465 aa19.29■□□□□ 0.68
RXRB-205ENST00000483821 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.68
RXRB-205ENST00000483821 KIF13AQ9H1H9 1805 aa19.27■□□□□ 0.68
RXRB-205ENST00000483821 RICTORQ6R327 1708 aa19.26■□□□□ 0.67
RXRB-205ENST00000483821 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
RXRB-205ENST00000483821 PPRC1Q5VV67 1664 aaKnown RBP19.26■□□□□ 0.67
RXRB-205ENST00000483821 TSPOAP1O95153 1857 aa19.25■□□□□ 0.67
RXRB-205ENST00000483821 RPRD2Q5VT52 1461 aaKnown RBP19.25■□□□□ 0.67
RXRB-205ENST00000483821 ZMYM4Q5VZL5 1548 aa19.25■□□□□ 0.67
RXRB-205ENST00000483821 DEPDC5O75140 1603 aa19.22■□□□□ 0.67
RXRB-205ENST00000483821 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
RXRB-205ENST00000483821 FRMPD1Q5SYB0 1578 aa19.19■□□□□ 0.66
RXRB-205ENST00000483821 DIP2CQ9Y2E4 1556 aa19.19■□□□□ 0.66
RXRB-205ENST00000483821 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
RXRB-205ENST00000483821 ATP10AO60312 1499 aa19.18■□□□□ 0.66
RXRB-205ENST00000483821 TRHP20396 242 aaPredicted RBP19.18■□□□□ 0.66
RXRB-205ENST00000483821 PRDM15P57071 1507 aaPredicted RBP19.18■□□□□ 0.66
RXRB-205ENST00000483821 VWDEQ8N2E2 1590 aa19.17■□□□□ 0.66
RXRB-205ENST00000483821 BCORL1Q5H9F3 1711 aa19.17■□□□□ 0.66
RXRB-205ENST00000483821 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
RXRB-205ENST00000483821 RNF17Q9BXT8 1623 aaKnown RBP19.16■□□□□ 0.66
RXRB-205ENST00000483821 L3MBTL2Q969R5 705 aa19.16■□□□□ 0.66
RXRB-205ENST00000483821 YEATS2Q9ULM3 1422 aa19.15■□□□□ 0.66
RXRB-205ENST00000483821 GGT6Q6P531 493 aa19.14■□□□□ 0.65
RXRB-205ENST00000483821 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
RXRB-205ENST00000483821 LMTK2Q8IWU2 1503 aa19.14■□□□□ 0.65
RXRB-205ENST00000483821 TET3O43151 1660 aa19.14■□□□□ 0.65
RXRB-205ENST00000483821 REREQ9P2R6 1566 aa19.12■□□□□ 0.65
RXRB-205ENST00000483821 WASHC2CQ9Y4E1 1318 aa19.12■□□□□ 0.65
RXRB-205ENST00000483821 MROH1Q8NDA8 1641 aa19.11■□□□□ 0.65
RXRB-205ENST00000483821 COL17A1Q9UMD9 1497 aaPredicted RBP19.09■□□□□ 0.65
RXRB-205ENST00000483821 AGLP35573 1532 aa19.09■□□□□ 0.65
RXRB-205ENST00000483821 PLA2R1Q13018 1463 aa19.09■□□□□ 0.65
RXRB-205ENST00000483821 PTPRTO14522 1441 aa19.08■□□□□ 0.65
RXRB-205ENST00000483821 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
RXRB-205ENST00000483821 E9PCH4 1651 aa19.05■□□□□ 0.64
RXRB-205ENST00000483821 STAC3Q96MF2 364 aa19.05■□□□□ 0.64
RXRB-205ENST00000483821 TRPM2O94759 1503 aa19.05■□□□□ 0.64
RXRB-205ENST00000483821 ARHGEF40Q8TER5 1519 aa19.05■□□□□ 0.64
RXRB-205ENST00000483821 ABCC3O15438 1527 aa19.03■□□□□ 0.64
RXRB-205ENST00000483821 ZC3H13Q5T200 1668 aaKnown RBP19.01■□□□□ 0.63
RXRB-205ENST00000483821 ARHGAP31Q2M1Z3 1444 aa19.01■□□□□ 0.63
RXRB-205ENST00000483821 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
RXRB-205ENST00000483821 UHRF1BP1Q6BDS2 1440 aa19■□□□□ 0.63
RXRB-205ENST00000483821 DCAF11Q8TEB1 546 aa18.99■□□□□ 0.63
RXRB-205ENST00000483821 CNTLNQ9NXG0 1405 aa18.99■□□□□ 0.63
RXRB-205ENST00000483821 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
RXRB-205ENST00000483821 CEP152O94986 1710 aa18.97■□□□□ 0.63
RXRB-205ENST00000483821 RGL3Q3MIN7 710 aa18.97■□□□□ 0.63
RXRB-205ENST00000483821 NPATQ14207 1427 aa18.97■□□□□ 0.63
RXRB-205ENST00000483821 NBPF8Q3BBV2 869 aa18.96■□□□□ 0.63
RXRB-205ENST00000483821 NEURL4Q96JN8 1562 aa18.95■□□□□ 0.62
RXRB-205ENST00000483821 EIF4G2P78344 907 aaKnown RBP eCLIP18.95■□□□□ 0.62
RXRB-205ENST00000483821 DIEXFQ68CQ4 756 aaKnown RBP18.95■□□□□ 0.62
RXRB-205ENST00000483821 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
RXRB-205ENST00000483821 CAMSAP1Q5T5Y3 1602 aa18.95■□□□□ 0.62
RXRB-205ENST00000483821 SPATA31E1Q6ZUB1 1445 aa18.94■□□□□ 0.62
RXRB-205ENST00000483821 ARID4BQ4LE39 1312 aaPredicted RBP18.94■□□□□ 0.62
RXRB-205ENST00000483821 ZNF326Q5BKZ1 582 aaKnown RBP18.93■□□□□ 0.62
RXRB-205ENST00000483821 SLC52A1Q9NWF4 448 aa18.92■□□□□ 0.62
RXRB-205ENST00000483821 NOS1P29475 1434 aa18.91■□□□□ 0.62
RXRB-205ENST00000483821 CLTCL1P53675 1640 aa18.91■□□□□ 0.62
RXRB-205ENST00000483821 MLECQ14165 292 aa18.89■□□□□ 0.61
RXRB-205ENST00000483821 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
RXRB-205ENST00000483821 PRAG1Q86YV5 1406 aa18.88■□□□□ 0.61
RXRB-205ENST00000483821 RALGAPBQ86X10 1494 aa18.88■□□□□ 0.61
RXRB-205ENST00000483821 HSPA5P11021 654 aaKnown RBP18.86■□□□□ 0.61
RXRB-205ENST00000483821 KIF1BO60333 1816 aa18.84■□□□□ 0.61
RXRB-205ENST00000483821 CHGAP10645 457 aaKnown RBP18.84■□□□□ 0.61
RXRB-205ENST00000483821 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
RXRB-205ENST00000483821 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
RXRB-205ENST00000483821 ZMYM3Q14202 1370 aa18.81■□□□□ 0.6
RXRB-205ENST00000483821 ERVK-7P63135 1459 aa18.81■□□□□ 0.6
RXRB-205ENST00000483821 UGGT1Q9NYU2 1555 aa18.81■□□□□ 0.6
RXRB-205ENST00000483821 CLTCQ00610 1675 aaKnown RBP18.8■□□□□ 0.6
RXRB-205ENST00000483821 IDI1Q13907 227 aa18.8■□□□□ 0.6
RXRB-205ENST00000483821 SIGLEC1Q9BZZ2 1709 aa18.8■□□□□ 0.6
RXRB-205ENST00000483821 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
RXRB-205ENST00000483821 MYOM2P54296 1465 aa18.79■□□□□ 0.6
RXRB-205ENST00000483821 SYNMO15061 1565 aa18.79■□□□□ 0.6
RXRB-205ENST00000483821 GPRASP1Q5JY77 1395 aa18.79■□□□□ 0.6
RXRB-205ENST00000483821 USP47Q96K76 1375 aa18.79■□□□□ 0.6
RXRB-205ENST00000483821 PREX1Q8TCU6 1659 aa18.79■□□□□ 0.6
RXRB-205ENST00000483821 PIK3C2BO00750 1634 aa18.78■□□□□ 0.6
RXRB-205ENST00000483821 VGFO15240 615 aaPredicted RBP18.78■□□□□ 0.6
RXRB-205ENST00000483821 FBXO31Q5XUX0 539 aaPredicted RBP18.78■□□□□ 0.6
RXRB-205ENST00000483821 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
RXRB-205ENST00000483821 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
RXRB-205ENST00000483821 STAG3Q9UJ98 1225 aa18.76■□□□□ 0.59
RXRB-205ENST00000483821 SPATA31D1Q6ZQQ2 1576 aa18.76■□□□□ 0.59
RXRB-205ENST00000483821 TRPM1Q7Z4N2 1603 aa18.75■□□□□ 0.59
RXRB-205ENST00000483821 LAMC1P11047 1609 aa18.73■□□□□ 0.59
RXRB-205ENST00000483821 MADDQ8WXG6 1647 aa18.73■□□□□ 0.59
RXRB-205ENST00000483821 MROH2AA6NES4 1674 aa18.73■□□□□ 0.59
RXRB-205ENST00000483821 NBPF1Q3BBV0 1214 aa18.71■□□□□ 0.59
RXRB-205ENST00000483821 ZFYVE9O95405 1425 aa18.71■□□□□ 0.59
RXRB-205ENST00000483821 NRXN1Q9ULB1 1477 aa18.71■□□□□ 0.59
RXRB-205ENST00000483821 TNRQ92752 1358 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms