RNA–Protein interactions for RNA: ENST00000483553.5

SKIV2L-209, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 1,307 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-209ENST00000483553 RTEL1-TNFRSF6BF6WH68 1400 aa24.98■■□□□ 1.59
SKIV2L-209ENST00000483553 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
SKIV2L-209ENST00000483553 DHX29Q7Z478 1369 aaKnown RBP24.96■■□□□ 1.59
SKIV2L-209ENST00000483553 ZNF644Q9H582 1327 aaPredicted RBP24.95■■□□□ 1.59
SKIV2L-209ENST00000483553 MBD5Q9P267 1494 aa24.95■■□□□ 1.59
SKIV2L-209ENST00000483553 TOM1O60784 492 aa24.93■■□□□ 1.58
SKIV2L-209ENST00000483553 CPS1P31327 1500 aa24.92■■□□□ 1.58
SKIV2L-209ENST00000483553 POLR1AO95602 1720 aaPredicted RBP24.92■■□□□ 1.58
SKIV2L-209ENST00000483553 TNRQ92752 1358 aa24.92■■□□□ 1.58
SKIV2L-209ENST00000483553 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
SKIV2L-209ENST00000483553 HSPA1LP34931 641 aa24.9■■□□□ 1.58
SKIV2L-209ENST00000483553 KIF3BO15066 747 aa24.89■■□□□ 1.58
SKIV2L-209ENST00000483553 PIP4K2BP78356 416 aa24.89■■□□□ 1.58
SKIV2L-209ENST00000483553 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.57
SKIV2L-209ENST00000483553 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
SKIV2L-209ENST00000483553 FAM135AQ9P2D6 1515 aa24.88■■□□□ 1.57
SKIV2L-209ENST00000483553 NCOA2Q15596 1464 aa24.88■■□□□ 1.57
SKIV2L-209ENST00000483553 ANKLE2Q86XL3 938 aa24.87■■□□□ 1.57
SKIV2L-209ENST00000483553 NEURL4Q96JN8 1562 aa24.87■■□□□ 1.57
SKIV2L-209ENST00000483553 PZPP20742 1482 aa24.87■■□□□ 1.57
SKIV2L-209ENST00000483553 KDM5DQ9BY66 1539 aa24.86■■□□□ 1.57
SKIV2L-209ENST00000483553 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
SKIV2L-209ENST00000483553 THEMISQ8N1K5 641 aaPredicted RBP24.86■■□□□ 1.57
SKIV2L-209ENST00000483553 WASHC2CQ9Y4E1 1318 aa24.85■■□□□ 1.57
SKIV2L-209ENST00000483553 MED1Q15648 1581 aaPredicted RBP24.84■■□□□ 1.57
SKIV2L-209ENST00000483553 CCDC141Q6ZP82 1450 aa24.82■■□□□ 1.56
SKIV2L-209ENST00000483553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.81■■□□□ 1.56
SKIV2L-209ENST00000483553 MIA2Q96PC5 1412 aa24.81■■□□□ 1.56
SKIV2L-209ENST00000483553 NLRP1Q9C000 1473 aa24.8■■□□□ 1.56
SKIV2L-209ENST00000483553 VWDEQ8N2E2 1590 aa24.78■■□□□ 1.56
SKIV2L-209ENST00000483553 UGGT1Q9NYU2 1555 aa24.78■■□□□ 1.56
SKIV2L-209ENST00000483553 MED14O60244 1454 aa24.78■■□□□ 1.56
SKIV2L-209ENST00000483553 DEPDC5O75140 1603 aa24.77■■□□□ 1.56
SKIV2L-209ENST00000483553 NPHP4O75161 1426 aaPredicted RBP24.77■■□□□ 1.56
SKIV2L-209ENST00000483553 PPARGC1BQ86YN6 1023 aaKnown RBP24.76■■□□□ 1.55
SKIV2L-209ENST00000483553 CAMSAP2Q08AD1 1489 aa24.75■■□□□ 1.55
SKIV2L-209ENST00000483553 TSPY4P0CV99 314 aa24.74■■□□□ 1.55
SKIV2L-209ENST00000483553 TSPY10P0CW01 314 aa24.74■■□□□ 1.55
SKIV2L-209ENST00000483553 PHF23Q9BUL5 403 aaPredicted RBP24.72■■□□□ 1.55
SKIV2L-209ENST00000483553 MYOM3Q5VTT5 1437 aa24.71■■□□□ 1.55
SKIV2L-209ENST00000483553 IQGAP1P46940 1657 aa24.7■■□□□ 1.54
SKIV2L-209ENST00000483553 ARHGEF5Q12774 1597 aa24.69■■□□□ 1.54
SKIV2L-209ENST00000483553 ALKQ9UM73 1620 aa24.69■■□□□ 1.54
SKIV2L-209ENST00000483553 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
SKIV2L-209ENST00000483553 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.54
SKIV2L-209ENST00000483553 ZC3H13Q5T200 1668 aaKnown RBP24.64■■□□□ 1.54
SKIV2L-209ENST00000483553 PTPN23Q9H3S7 1636 aa24.63■■□□□ 1.53
SKIV2L-209ENST00000483553 ABCC3O15438 1527 aa24.63■■□□□ 1.53
SKIV2L-209ENST00000483553 STRCP1A6NGW2 1772 aa24.62■■□□□ 1.53
SKIV2L-209ENST00000483553 SYNMO15061 1565 aa24.62■■□□□ 1.53
SKIV2L-209ENST00000483553 FGD6Q6ZV73 1430 aa24.61■■□□□ 1.53
SKIV2L-209ENST00000483553 ERVK-7P63135 1459 aa24.6■■□□□ 1.53
SKIV2L-209ENST00000483553 MAST1Q9Y2H9 1570 aa24.58■■□□□ 1.52
SKIV2L-209ENST00000483553 EIF2AK4Q9P2K8 1649 aaKnown RBP24.58■■□□□ 1.52
SKIV2L-209ENST00000483553 SENP3Q9H4L4 574 aaPredicted RBP24.56■■□□□ 1.52
SKIV2L-209ENST00000483553 UBR1Q8IWV7 1749 aa24.54■■□□□ 1.52
SKIV2L-209ENST00000483553 CFAP65Q6ZU64 1925 aaKnown RBP24.54■■□□□ 1.52
SKIV2L-209ENST00000483553 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
SKIV2L-209ENST00000483553 MROH1Q8NDA8 1641 aa24.51■■□□□ 1.51
SKIV2L-209ENST00000483553 CEP152O94986 1710 aa24.5■■□□□ 1.51
SKIV2L-209ENST00000483553 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
SKIV2L-209ENST00000483553 LTKP29376 864 aa24.49■■□□□ 1.51
SKIV2L-209ENST00000483553 CROCC2H7BZ55 1655 aa24.49■■□□□ 1.51
SKIV2L-209ENST00000483553 SLIT1O75093 1534 aa24.48■■□□□ 1.51
SKIV2L-209ENST00000483553 ARHGAP23Q9P227 1491 aa24.48■■□□□ 1.51
SKIV2L-209ENST00000483553 DUOX2Q9NRD8 1548 aa24.47■■□□□ 1.51
SKIV2L-209ENST00000483553 EID1Q9Y6B2 187 aa24.47■■□□□ 1.51
SKIV2L-209ENST00000483553 ARHGAP31Q2M1Z3 1444 aa24.46■■□□□ 1.51
SKIV2L-209ENST00000483553 RRBP1Q9P2E9 1410 aaKnown RBP24.46■■□□□ 1.51
SKIV2L-209ENST00000483553 FAM50AQ14320 339 aaKnown RBP24.43■■□□□ 1.5
SKIV2L-209ENST00000483553 RGS17Q9UGC6 210 aaPredicted RBP24.43■■□□□ 1.5
SKIV2L-209ENST00000483553 XIRP1Q702N8 1843 aaKnown RBP24.43■■□□□ 1.5
SKIV2L-209ENST00000483553 FAM135BQ49AJ0 1406 aa24.4■■□□□ 1.5
SKIV2L-209ENST00000483553 PRDM15P57071 1507 aaPredicted RBP24.39■■□□□ 1.5
SKIV2L-209ENST00000483553 DAPK1P53355 1430 aa24.38■■□□□ 1.49
SKIV2L-209ENST00000483553 KIF15Q9NS87 1388 aa24.38■■□□□ 1.49
SKIV2L-209ENST00000483553 TMEM2Q9UHN6 1383 aa24.38■■□□□ 1.49
SKIV2L-209ENST00000483553 ABCC5O15440 1437 aa24.37■■□□□ 1.49
SKIV2L-209ENST00000483553 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
SKIV2L-209ENST00000483553 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
SKIV2L-209ENST00000483553 PIK3C2BO00750 1634 aa24.36■■□□□ 1.49
SKIV2L-209ENST00000483553 RRP7BPQ9NSQ0 103 aa24.35■■□□□ 1.49
SKIV2L-209ENST00000483553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.34■■□□□ 1.491e-7■■■■□ 20.4
SKIV2L-209ENST00000483553 TMEM94Q12767 1356 aa24.33■■□□□ 1.49
SKIV2L-209ENST00000483553 KANK1Q14678 1352 aa24.33■■□□□ 1.49
SKIV2L-209ENST00000483553 KCNA6P17658 529 aa24.33■■□□□ 1.48
SKIV2L-209ENST00000483553 KDM5AP29375 1690 aaKnown RBP24.33■■□□□ 1.48
SKIV2L-209ENST00000483553 EFCAB6Q5THR3 1501 aa24.3■■□□□ 1.48
SKIV2L-209ENST00000483553 IDI1Q13907 227 aa24.3■■□□□ 1.48
SKIV2L-209ENST00000483553 PROSER2Q86WR7 435 aaPredicted RBP24.3■■□□□ 1.48
SKIV2L-209ENST00000483553 POTEAQ6S8J7 498 aa24.28■■□□□ 1.48
SKIV2L-209ENST00000483553 TET3O43151 1660 aa24.27■■□□□ 1.48
SKIV2L-209ENST00000483553 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
SKIV2L-209ENST00000483553 SLC26A8Q96RN1 970 aa24.26■■□□□ 1.47
SKIV2L-209ENST00000483553 LMTK2Q8IWU2 1503 aa24.25■■□□□ 1.47
SKIV2L-209ENST00000483553 ITGAEP38570 1179 aa24.24■■□□□ 1.47
SKIV2L-209ENST00000483553 ADGRL2O95490 1459 aa24.23■■□□□ 1.47
SKIV2L-209ENST00000483553 NKTRP30414 1462 aaKnown RBP24.22■■□□□ 1.47
SKIV2L-209ENST00000483553 CHIC2Q9UKJ5 165 aa24.22■■□□□ 1.47
SKIV2L-209ENST00000483553 RBM33Q96EV2 1170 aaKnown RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms