RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SPATA31E1Q6ZUB1 1445 aa18.69■□□□□ 0.58
CPNE1-225ENST00000483495 DHX29Q7Z478 1369 aaKnown RBP18.69■□□□□ 0.58
CPNE1-225ENST00000483495 CCDC144AA2RUR9 1427 aa18.68■□□□□ 0.58
CPNE1-225ENST00000483495 NEO1Q92859 1461 aa18.68■□□□□ 0.58
CPNE1-225ENST00000483495 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
CPNE1-225ENST00000483495 POGZQ7Z3K3 1410 aa18.68■□□□□ 0.58
CPNE1-225ENST00000483495 KDM5CP41229 1560 aa18.68■□□□□ 0.58
CPNE1-225ENST00000483495 CENPBP07199 599 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-225ENST00000483495 KIDINS220Q9ULH0 1771 aa18.66■□□□□ 0.58
CPNE1-225ENST00000483495 VWDEQ8N2E2 1590 aa18.66■□□□□ 0.58
CPNE1-225ENST00000483495 CYB5RLQ6IPT4 315 aa18.65■□□□□ 0.58
CPNE1-225ENST00000483495 MLH3Q9UHC1 1453 aa18.64■□□□□ 0.58
CPNE1-225ENST00000483495 GLI2P10070 1586 aa18.64■□□□□ 0.57
CPNE1-225ENST00000483495 RALGAPBQ86X10 1494 aa18.64■□□□□ 0.57
CPNE1-225ENST00000483495 PRDM15P57071 1507 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-225ENST00000483495 MAP3K4Q9Y6R4 1608 aa18.62■□□□□ 0.57
CPNE1-225ENST00000483495 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
CPNE1-225ENST00000483495 MROH1Q8NDA8 1641 aa18.6■□□□□ 0.57
CPNE1-225ENST00000483495 KANK1Q14678 1352 aa18.6■□□□□ 0.57
CPNE1-225ENST00000483495 PTPRTO14522 1441 aa18.6■□□□□ 0.57
CPNE1-225ENST00000483495 E9PCH4 1651 aa18.6■□□□□ 0.57
CPNE1-225ENST00000483495 TET3O43151 1660 aa18.6■□□□□ 0.57
CPNE1-225ENST00000483495 HECW2Q9P2P5 1572 aa18.59■□□□□ 0.57
CPNE1-225ENST00000483495 A2MP01023 1474 aa18.59■□□□□ 0.57
CPNE1-225ENST00000483495 KIF3BO15066 747 aa18.58■□□□□ 0.57
CPNE1-225ENST00000483495 MYT1LQ9UL68 1186 aa18.58■□□□□ 0.57
CPNE1-225ENST00000483495 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.56
CPNE1-225ENST00000483495 TRPM2O94759 1503 aa18.57■□□□□ 0.56
CPNE1-225ENST00000483495 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
CPNE1-225ENST00000483495 CCDC7Q96M83 1385 aa18.56■□□□□ 0.56
CPNE1-225ENST00000483495 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
CPNE1-225ENST00000483495 USP47Q96K76 1375 aa18.56■□□□□ 0.56
CPNE1-225ENST00000483495 PRAG1Q86YV5 1406 aa18.56■□□□□ 0.56
CPNE1-225ENST00000483495 RNF17Q9BXT8 1623 aaKnown RBP18.56■□□□□ 0.56
CPNE1-225ENST00000483495 FRMPD1Q5SYB0 1578 aa18.55■□□□□ 0.56
CPNE1-225ENST00000483495 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
CPNE1-225ENST00000483495 C11orf95C9JLR9 678 aaPredicted RBP18.54■□□□□ 0.56
CPNE1-225ENST00000483495 BCORL1Q5H9F3 1711 aa18.54■□□□□ 0.56
CPNE1-225ENST00000483495 ANP32CO43423 234 aa18.53■□□□□ 0.56
CPNE1-225ENST00000483495 KDM2AQ9Y2K7 1162 aa18.53■□□□□ 0.56
CPNE1-225ENST00000483495 POLR1AO95602 1720 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-225ENST00000483495 SPHKAPQ2M3C7 1700 aa18.53■□□□□ 0.56
CPNE1-225ENST00000483495 DIP2BQ9P265 1576 aa18.52■□□□□ 0.55
CPNE1-225ENST00000483495 CCER2I3L3R5 266 aa18.52■□□□□ 0.55
CPNE1-225ENST00000483495 ABCA6Q8N139 1617 aa18.51■□□□□ 0.55
CPNE1-225ENST00000483495 CNTLNQ9NXG0 1405 aa18.51■□□□□ 0.55
CPNE1-225ENST00000483495 EFCAB6Q5THR3 1501 aa18.51■□□□□ 0.55
CPNE1-225ENST00000483495 TRPM1Q7Z4N2 1603 aa18.5■□□□□ 0.55
CPNE1-225ENST00000483495 RICTORQ6R327 1708 aa18.5■□□□□ 0.55
CPNE1-225ENST00000483495 KIF7Q2M1P5 1343 aa18.5■□□□□ 0.55
CPNE1-225ENST00000483495 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
CPNE1-225ENST00000483495 NEURL4Q96JN8 1562 aa18.5■□□□□ 0.55
CPNE1-225ENST00000483495 CARD11Q9BXL7 1154 aa18.5■□□□□ 0.55
CPNE1-225ENST00000483495 GPRASP1Q5JY77 1395 aa18.49■□□□□ 0.55
CPNE1-225ENST00000483495 RAPGEF3O95398 923 aa18.49■□□□□ 0.55
CPNE1-225ENST00000483495 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-225ENST00000483495 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
CPNE1-225ENST00000483495 CEP152O94986 1710 aa18.47■□□□□ 0.55
CPNE1-225ENST00000483495 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
CPNE1-225ENST00000483495 DIP2CQ9Y2E4 1556 aa18.47■□□□□ 0.55
CPNE1-225ENST00000483495 LAMC1P11047 1609 aa18.47■□□□□ 0.55
CPNE1-225ENST00000483495 FAM69CQ0P6D2 419 aa18.46■□□□□ 0.55
CPNE1-225ENST00000483495 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
CPNE1-225ENST00000483495 PPRC1Q5VV67 1664 aaKnown RBP18.46■□□□□ 0.55
CPNE1-225ENST00000483495 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
CPNE1-225ENST00000483495 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
CPNE1-225ENST00000483495 ABCC3O15438 1527 aa18.4■□□□□ 0.54
CPNE1-225ENST00000483495 ST20-MTHFSA0A0A6YYL1 179 aa18.39■□□□□ 0.54
CPNE1-225ENST00000483495 NBPF1Q3BBV0 1214 aa18.39■□□□□ 0.54
CPNE1-225ENST00000483495 MADDQ8WXG6 1647 aa18.39■□□□□ 0.53
CPNE1-225ENST00000483495 NPATQ14207 1427 aa18.39■□□□□ 0.53
CPNE1-225ENST00000483495 YEATS2Q9ULM3 1422 aa18.39■□□□□ 0.53
CPNE1-225ENST00000483495 GGT6Q6P531 493 aa18.37■□□□□ 0.53
CPNE1-225ENST00000483495 UGGT1Q9NYU2 1555 aa18.36■□□□□ 0.53
CPNE1-225ENST00000483495 WASHC2CQ9Y4E1 1318 aa18.35■□□□□ 0.53
CPNE1-225ENST00000483495 MYOM2P54296 1465 aa18.34■□□□□ 0.53
CPNE1-225ENST00000483495 ARHGAP31Q2M1Z3 1444 aa18.34■□□□□ 0.53
CPNE1-225ENST00000483495 ZC3H13Q5T200 1668 aaKnown RBP18.33■□□□□ 0.52
CPNE1-225ENST00000483495 CAMSAP1Q5T5Y3 1602 aa18.33■□□□□ 0.52
CPNE1-225ENST00000483495 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-225ENST00000483495 ADGRB3O60242 1522 aa18.32■□□□□ 0.52
CPNE1-225ENST00000483495 KIF1BO60333 1816 aa18.32■□□□□ 0.52
CPNE1-225ENST00000483495 REREQ9P2R6 1566 aa18.32■□□□□ 0.52
CPNE1-225ENST00000483495 NOS1P29475 1434 aa18.32■□□□□ 0.52
CPNE1-225ENST00000483495 KIAA1210Q9ULL0 1709 aa18.31■□□□□ 0.52
CPNE1-225ENST00000483495 TSPOAP1O95153 1857 aa18.3■□□□□ 0.52
CPNE1-225ENST00000483495 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
CPNE1-225ENST00000483495 NRXN1Q9ULB1 1477 aa18.29■□□□□ 0.52
CPNE1-225ENST00000483495 TESK2Q96S53 571 aa18.29■□□□□ 0.52
CPNE1-225ENST00000483495 KIF13AQ9H1H9 1805 aa18.29■□□□□ 0.52
CPNE1-225ENST00000483495 IFT172Q9UG01 1749 aa18.29■□□□□ 0.52
CPNE1-225ENST00000483495 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
CPNE1-225ENST00000483495 COL17A1Q9UMD9 1497 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-225ENST00000483495 AGLP35573 1532 aa18.28■□□□□ 0.52
CPNE1-225ENST00000483495 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
CPNE1-225ENST00000483495 PIK3C2BO00750 1634 aa18.26■□□□□ 0.51
CPNE1-225ENST00000483495 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
CPNE1-225ENST00000483495 SIGLEC1Q9BZZ2 1709 aa18.25■□□□□ 0.51
CPNE1-225ENST00000483495 SYNMO15061 1565 aa18.24■□□□□ 0.51
CPNE1-225ENST00000483495 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms