RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 WASHC2CQ9Y4E1 1318 aa23.83■■□□□ 1.4
EXOSC3-205ENST00000482614 CROCC2H7BZ55 1655 aa23.83■■□□□ 1.4
EXOSC3-205ENST00000482614 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
EXOSC3-205ENST00000482614 STRCQ7RTU9 1775 aa23.81■■□□□ 1.4
EXOSC3-205ENST00000482614 DAPK1P53355 1430 aa23.81■■□□□ 1.4
EXOSC3-205ENST00000482614 DNMT1P26358 1616 aaKnown RBP23.81■■□□□ 1.4
EXOSC3-205ENST00000482614 DUOX2Q9NRD8 1548 aa23.8■■□□□ 1.4
EXOSC3-205ENST00000482614 RNF17Q9BXT8 1623 aaKnown RBP23.79■■□□□ 1.4
EXOSC3-205ENST00000482614 MYO3AQ8NEV4 1616 aa23.77■■□□□ 1.4
EXOSC3-205ENST00000482614 KIF15Q9NS87 1388 aa23.76■■□□□ 1.39
EXOSC3-205ENST00000482614 PZPP20742 1482 aa23.75■■□□□ 1.39
EXOSC3-205ENST00000482614 RRP7BPQ9NSQ0 103 aa23.75■■□□□ 1.39
EXOSC3-205ENST00000482614 ZNF142P52746 1687 aaPredicted RBP23.75■■□□□ 1.39
EXOSC3-205ENST00000482614 NCOA1Q15788 1441 aa23.73■■□□□ 1.39
EXOSC3-205ENST00000482614 CEP170BQ9Y4F5 1589 aaPredicted RBP23.73■■□□□ 1.39
EXOSC3-205ENST00000482614 CAMSAP1Q5T5Y3 1602 aa23.73■■□□□ 1.39
EXOSC3-205ENST00000482614 ZC3H13Q5T200 1668 aaKnown RBP23.73■■□□□ 1.39
EXOSC3-205ENST00000482614 FAM50AQ14320 339 aaKnown RBP23.72■■□□□ 1.39
EXOSC3-205ENST00000482614 FBXO31Q5XUX0 539 aaPredicted RBP23.72■■□□□ 1.39
EXOSC3-205ENST00000482614 PTPRTO14522 1441 aa23.72■■□□□ 1.39
EXOSC3-205ENST00000482614 ERBINQ96RT1 1412 aa23.72■■□□□ 1.39
EXOSC3-205ENST00000482614 TNRQ92752 1358 aa23.71■■□□□ 1.39
EXOSC3-205ENST00000482614 ANKRD30AQ9BXX3 1397 aa23.71■■□□□ 1.39
EXOSC3-205ENST00000482614 CHIC2Q9UKJ5 165 aa23.71■■□□□ 1.39
EXOSC3-205ENST00000482614 ABCC3O15438 1527 aa23.7■■□□□ 1.38
EXOSC3-205ENST00000482614 FBXO41Q8TF61 875 aa23.7■■□□□ 1.38
EXOSC3-205ENST00000482614 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.38
EXOSC3-205ENST00000482614 A2ML1A8K2U0 1454 aa23.68■■□□□ 1.38
EXOSC3-205ENST00000482614 PLA2R1Q13018 1463 aa23.66■■□□□ 1.38
EXOSC3-205ENST00000482614 CEP152O94986 1710 aa23.64■■□□□ 1.38
EXOSC3-205ENST00000482614 ADGRL2O95490 1459 aa23.64■■□□□ 1.38
EXOSC3-205ENST00000482614 PKD2Q13563 968 aa23.64■■□□□ 1.37
EXOSC3-205ENST00000482614 CERKQ8TCT0 537 aa23.64■■□□□ 1.37
EXOSC3-205ENST00000482614 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.37
EXOSC3-205ENST00000482614 NCKAP5LQ9HCH0 1330 aa23.63■■□□□ 1.37
EXOSC3-205ENST00000482614 NLRP1Q9C000 1473 aa23.62■■□□□ 1.37
EXOSC3-205ENST00000482614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.61■■□□□ 1.37
EXOSC3-205ENST00000482614 DEPDC5O75140 1603 aa23.61■■□□□ 1.37
EXOSC3-205ENST00000482614 KANK1Q14678 1352 aa23.61■■□□□ 1.37
EXOSC3-205ENST00000482614 SPATA31D1Q6ZQQ2 1576 aa23.6■■□□□ 1.37
EXOSC3-205ENST00000482614 ERVK-7P63135 1459 aa23.58■■□□□ 1.37
EXOSC3-205ENST00000482614 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
EXOSC3-205ENST00000482614 CFAP65Q6ZU64 1925 aaKnown RBP23.57■■□□□ 1.36
EXOSC3-205ENST00000482614 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
EXOSC3-205ENST00000482614 ARHGAP31Q2M1Z3 1444 aa23.57■■□□□ 1.36
EXOSC3-205ENST00000482614 UGGT1Q9NYU2 1555 aa23.55■■□□□ 1.36
EXOSC3-205ENST00000482614 ANKRD50Q9ULJ7 1429 aa23.53■■□□□ 1.36
EXOSC3-205ENST00000482614 LMTK2Q8IWU2 1503 aa23.52■■□□□ 1.36
EXOSC3-205ENST00000482614 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
EXOSC3-205ENST00000482614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
EXOSC3-205ENST00000482614 POLR1AO95602 1720 aaPredicted RBP23.51■■□□□ 1.35
EXOSC3-205ENST00000482614 ANKLE2Q86XL3 938 aa23.51■■□□□ 1.35
EXOSC3-205ENST00000482614 LTBP4Q8N2S1 1624 aa23.5■■□□□ 1.35
EXOSC3-205ENST00000482614 ROCK1Q13464 1354 aa23.5■■□□□ 1.35
EXOSC3-205ENST00000482614 NEURL4Q96JN8 1562 aa23.45■■□□□ 1.34
EXOSC3-205ENST00000482614 ITGAEP38570 1179 aa23.45■■□□□ 1.34
EXOSC3-205ENST00000482614 ZNF335Q9H4Z2 1342 aaPredicted RBP23.44■■□□□ 1.34
EXOSC3-205ENST00000482614 UBR1Q8IWV7 1749 aa23.43■■□□□ 1.34
EXOSC3-205ENST00000482614 EFCAB6Q5THR3 1501 aa23.42■■□□□ 1.34
EXOSC3-205ENST00000482614 IQSEC2Q5JU85 1478 aa23.42■■□□□ 1.34
EXOSC3-205ENST00000482614 MED14O60244 1454 aa23.41■■□□□ 1.34
EXOSC3-205ENST00000482614 NPHP4O75161 1426 aaPredicted RBP23.4■■□□□ 1.34
EXOSC3-205ENST00000482614 RRBP1Q9P2E9 1410 aaKnown RBP23.4■■□□□ 1.34
EXOSC3-205ENST00000482614 UNC13BO14795 1591 aa23.39■■□□□ 1.33
EXOSC3-205ENST00000482614 RPRD2Q5VT52 1461 aaKnown RBP23.37■■□□□ 1.33
EXOSC3-205ENST00000482614 NOS1P29475 1434 aa23.37■■□□□ 1.33
EXOSC3-205ENST00000482614 TET3O43151 1660 aa23.37■■□□□ 1.33
EXOSC3-205ENST00000482614 PIK3C2BO00750 1634 aa23.37■■□□□ 1.33
EXOSC3-205ENST00000482614 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
EXOSC3-205ENST00000482614 IDI1Q13907 227 aa23.35■■□□□ 1.33
EXOSC3-205ENST00000482614 SYNMO15061 1565 aa23.35■■□□□ 1.33
EXOSC3-205ENST00000482614 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
EXOSC3-205ENST00000482614 SLIT1O75093 1534 aa23.34■■□□□ 1.33
EXOSC3-205ENST00000482614 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
EXOSC3-205ENST00000482614 KDM5AP29375 1690 aaKnown RBP23.34■■□□□ 1.33
EXOSC3-205ENST00000482614 GCC2Q8IWJ2 1684 aa23.34■■□□□ 1.33
EXOSC3-205ENST00000482614 SLC52A1Q9NWF4 448 aa23.33■■□□□ 1.33
EXOSC3-205ENST00000482614 SCAF11Q99590 1463 aaKnown RBP23.32■■□□□ 1.32
EXOSC3-205ENST00000482614 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
EXOSC3-205ENST00000482614 EID1Q9Y6B2 187 aa23.32■■□□□ 1.32
EXOSC3-205ENST00000482614 IQGAP3Q86VI3 1631 aa23.3■■□□□ 1.32
EXOSC3-205ENST00000482614 CPS1P31327 1500 aa23.3■■□□□ 1.32
EXOSC3-205ENST00000482614 LTKP29376 864 aa23.3■■□□□ 1.32
EXOSC3-205ENST00000482614 NUP155O75694 1391 aa23.29■■□□□ 1.32
EXOSC3-205ENST00000482614 TMEM2Q9UHN6 1383 aa23.29■■□□□ 1.32
EXOSC3-205ENST00000482614 ADGRB3O60242 1522 aa23.26■■□□□ 1.31
EXOSC3-205ENST00000482614 E9PCH4 1651 aa23.25■■□□□ 1.31
EXOSC3-205ENST00000482614 UBAP1LF5GYI3 381 aa23.22■■□□□ 1.31
EXOSC3-205ENST00000482614 NAIPQ13075 1403 aa23.2■■□□□ 1.3
EXOSC3-205ENST00000482614 STRCP1A6NGW2 1772 aa23.17■■□□□ 1.3
EXOSC3-205ENST00000482614 HDGFP51858 240 aaKnown RBP23.17■■□□□ 1.3
EXOSC3-205ENST00000482614 MYO5BQ9ULV0 1848 aa23.17■■□□□ 1.3
EXOSC3-205ENST00000482614 TMEM131LA2VDJ0 1609 aa23.16■■□□□ 1.3
EXOSC3-205ENST00000482614 CHGAP10645 457 aaKnown RBP23.15■■□□□ 1.3
EXOSC3-205ENST00000482614 HFM1A2PYH4 1435 aa23.15■■□□□ 1.3
EXOSC3-205ENST00000482614 TOM1O60784 492 aa23.14■■□□□ 1.29
EXOSC3-205ENST00000482614 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
EXOSC3-205ENST00000482614 ZFYVE9O95405 1425 aa23.12■■□□□ 1.29
EXOSC3-205ENST00000482614 RIMS2Q9UQ26 1411 aa23.12■■□□□ 1.29
EXOSC3-205ENST00000482614 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms