RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CAMSAP1Q5T5Y3 1602 aa21.11■□□□□ 0.97
CTDSP1-208ENST00000482272 RNF17Q9BXT8 1623 aaKnown RBP21.11■□□□□ 0.97
CTDSP1-208ENST00000482272 NCOA1Q15788 1441 aa21.11■□□□□ 0.97
CTDSP1-208ENST00000482272 MROH1Q8NDA8 1641 aa21.11■□□□□ 0.97
CTDSP1-208ENST00000482272 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
CTDSP1-208ENST00000482272 KDM5DQ9BY66 1539 aa21.1■□□□□ 0.97
CTDSP1-208ENST00000482272 PTPRTO14522 1441 aa21.1■□□□□ 0.97
CTDSP1-208ENST00000482272 WASHC2CQ9Y4E1 1318 aa21.07■□□□□ 0.96
CTDSP1-208ENST00000482272 EIF2AK4Q9P2K8 1649 aaKnown RBP21.07■□□□□ 0.96
CTDSP1-208ENST00000482272 ABCC5O15440 1437 aa21.06■□□□□ 0.96
CTDSP1-208ENST00000482272 FAM135AQ9P2D6 1515 aa21.05■□□□□ 0.96
CTDSP1-208ENST00000482272 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
CTDSP1-208ENST00000482272 TCOF1Q13428 1488 aaKnown RBP21.05■□□□□ 0.96
CTDSP1-208ENST00000482272 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
CTDSP1-208ENST00000482272 FBXO31Q5XUX0 539 aaPredicted RBP21.04■□□□□ 0.96
CTDSP1-208ENST00000482272 PZPP20742 1482 aa21.04■□□□□ 0.96
CTDSP1-208ENST00000482272 CEP152O94986 1710 aa21.03■□□□□ 0.96
CTDSP1-208ENST00000482272 ABCC3O15438 1527 aa21.03■□□□□ 0.96
CTDSP1-208ENST00000482272 SHANK2Q9UPX8 1470 aa21.01■□□□□ 0.95
CTDSP1-208ENST00000482272 LTBP4Q8N2S1 1624 aa21.01■□□□□ 0.95
CTDSP1-208ENST00000482272 PKD2Q13563 968 aa21.01■□□□□ 0.95
CTDSP1-208ENST00000482272 ZC3H13Q5T200 1668 aaKnown RBP21.01■□□□□ 0.95
CTDSP1-208ENST00000482272 DAPK1P53355 1430 aa21.01■□□□□ 0.95
CTDSP1-208ENST00000482272 NCKAP5LQ9HCH0 1330 aa21.01■□□□□ 0.95
CTDSP1-208ENST00000482272 DUOX2Q9NRD8 1548 aa21■□□□□ 0.95
CTDSP1-208ENST00000482272 A2ML1A8K2U0 1454 aa21■□□□□ 0.95
CTDSP1-208ENST00000482272 PLA2R1Q13018 1463 aa20.98■□□□□ 0.95
CTDSP1-208ENST00000482272 TNRQ92752 1358 aa20.97■□□□□ 0.95
CTDSP1-208ENST00000482272 KIF15Q9NS87 1388 aa20.96■□□□□ 0.95
CTDSP1-208ENST00000482272 PRDM15P57071 1507 aaPredicted RBP20.95■□□□□ 0.94
CTDSP1-208ENST00000482272 NEURL4Q96JN8 1562 aa20.95■□□□□ 0.94
CTDSP1-208ENST00000482272 DEPDC5O75140 1603 aa20.95■□□□□ 0.94
CTDSP1-208ENST00000482272 SPATA31D1Q6ZQQ2 1576 aa20.94■□□□□ 0.94
CTDSP1-208ENST00000482272 POLR1AO95602 1720 aaPredicted RBP20.94■□□□□ 0.94
CTDSP1-208ENST00000482272 RRP7BPQ9NSQ0 103 aa20.92■□□□□ 0.94
CTDSP1-208ENST00000482272 ERBINQ96RT1 1412 aa20.91■□□□□ 0.94
CTDSP1-208ENST00000482272 ERVK-7P63135 1459 aa20.9■□□□□ 0.94
CTDSP1-208ENST00000482272 THEMISQ8N1K5 641 aaPredicted RBP20.9■□□□□ 0.94
CTDSP1-208ENST00000482272 CFAP65Q6ZU64 1925 aaKnown RBP20.9■□□□□ 0.94
CTDSP1-208ENST00000482272 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
CTDSP1-208ENST00000482272 NLRP1Q9C000 1473 aa20.88■□□□□ 0.93
CTDSP1-208ENST00000482272 ZNF335Q9H4Z2 1342 aaPredicted RBP20.87■□□□□ 0.93
CTDSP1-208ENST00000482272 ANKLE2Q86XL3 938 aa20.87■□□□□ 0.93
CTDSP1-208ENST00000482272 VWDEQ8N2E2 1590 aa20.86■□□□□ 0.93
CTDSP1-208ENST00000482272 UGGT1Q9NYU2 1555 aa20.86■□□□□ 0.93
CTDSP1-208ENST00000482272 ADGRL2O95490 1459 aa20.86■□□□□ 0.93
CTDSP1-208ENST00000482272 IQSEC2Q5JU85 1478 aa20.86■□□□□ 0.93
CTDSP1-208ENST00000482272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.85■□□□□ 0.937e-9■■■■■ 63.9
CTDSP1-208ENST00000482272 UBR1Q8IWV7 1749 aa20.84■□□□□ 0.93
CTDSP1-208ENST00000482272 ANKRD30AQ9BXX3 1397 aa20.84■□□□□ 0.93
CTDSP1-208ENST00000482272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.934e-17■□□□□ 10.2
CTDSP1-208ENST00000482272 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
CTDSP1-208ENST00000482272 ARHGAP31Q2M1Z3 1444 aa20.8■□□□□ 0.92
CTDSP1-208ENST00000482272 KANK1Q14678 1352 aa20.8■□□□□ 0.92
CTDSP1-208ENST00000482272 LMTK2Q8IWU2 1503 aa20.79■□□□□ 0.92
CTDSP1-208ENST00000482272 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
CTDSP1-208ENST00000482272 MED14O60244 1454 aa20.77■□□□□ 0.92
CTDSP1-208ENST00000482272 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
CTDSP1-208ENST00000482272 IQGAP1P46940 1657 aa20.77■□□□□ 0.91
CTDSP1-208ENST00000482272 SYNMO15061 1565 aa20.76■□□□□ 0.91
CTDSP1-208ENST00000482272 STRCP1A6NGW2 1772 aa20.75■□□□□ 0.91
CTDSP1-208ENST00000482272 EFCAB6Q5THR3 1501 aa20.75■□□□□ 0.91
CTDSP1-208ENST00000482272 UBAP1LF5GYI3 381 aa20.74■□□□□ 0.91
CTDSP1-208ENST00000482272 NPHP4O75161 1426 aaPredicted RBP20.73■□□□□ 0.91
CTDSP1-208ENST00000482272 ANKRD50Q9ULJ7 1429 aa20.71■□□□□ 0.91
CTDSP1-208ENST00000482272 ARHGAP23Q9P227 1491 aa20.71■□□□□ 0.91
CTDSP1-208ENST00000482272 UNC13BO14795 1591 aa20.71■□□□□ 0.91
CTDSP1-208ENST00000482272 SLIT1O75093 1534 aa20.7■□□□□ 0.9
CTDSP1-208ENST00000482272 CPS1P31327 1500 aa20.69■□□□□ 0.9
CTDSP1-208ENST00000482272 STAG3Q9UJ98 1225 aa20.69■□□□□ 0.9
CTDSP1-208ENST00000482272 NOS1P29475 1434 aa20.68■□□□□ 0.9
CTDSP1-208ENST00000482272 TET3O43151 1660 aa20.67■□□□□ 0.9
CTDSP1-208ENST00000482272 TXNDC2Q86VQ3 553 aa20.67■□□□□ 0.9
CTDSP1-208ENST00000482272 KDM5AP29375 1690 aaKnown RBP20.67■□□□□ 0.9
CTDSP1-208ENST00000482272 LTKP29376 864 aa20.66■□□□□ 0.9
CTDSP1-208ENST00000482272 EID1Q9Y6B2 187 aa20.66■□□□□ 0.9
CTDSP1-208ENST00000482272 ALKQ9UM73 1620 aa20.66■□□□□ 0.9
CTDSP1-208ENST00000482272 GCC2Q8IWJ2 1684 aa20.65■□□□□ 0.9
CTDSP1-208ENST00000482272 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
CTDSP1-208ENST00000482272 TOM1O60784 492 aa20.65■□□□□ 0.9
CTDSP1-208ENST00000482272 ILDR2Q71H61 639 aa20.64■□□□□ 0.89
CTDSP1-208ENST00000482272 MYO5BQ9ULV0 1848 aa20.64■□□□□ 0.89
CTDSP1-208ENST00000482272 E9PCH4 1651 aa20.64■□□□□ 0.89
CTDSP1-208ENST00000482272 ROCK1Q13464 1354 aa20.63■□□□□ 0.89
CTDSP1-208ENST00000482272 SOCS7O14512 581 aa20.63■□□□□ 0.89
CTDSP1-208ENST00000482272 IDI1Q13907 227 aa20.63■□□□□ 0.89
CTDSP1-208ENST00000482272 IQGAP3Q86VI3 1631 aa20.62■□□□□ 0.89
CTDSP1-208ENST00000482272 ADGRB3O60242 1522 aa20.62■□□□□ 0.89
CTDSP1-208ENST00000482272 SLC52A1Q9NWF4 448 aa20.6■□□□□ 0.89
CTDSP1-208ENST00000482272 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
CTDSP1-208ENST00000482272 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
CTDSP1-208ENST00000482272 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-208ENST00000482272 RPRD2Q5VT52 1461 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-208ENST00000482272 ITGAEP38570 1179 aa20.59■□□□□ 0.89
CTDSP1-208ENST00000482272 XIRP1Q702N8 1843 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-208ENST00000482272 PIP4K2BP78356 416 aa20.58■□□□□ 0.89
CTDSP1-208ENST00000482272 LRRC7Q96NW7 1537 aa20.58■□□□□ 0.88
CTDSP1-208ENST00000482272 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
CTDSP1-208ENST00000482272 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
CTDSP1-208ENST00000482272 HDGFP51858 240 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms