RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 PCGF6Q9BYE7 350 aa30.98■■■□□ 2.55
VPS16-207ENST00000481812 PPP6R1Q9UPN7 881 aa30.98■■■□□ 2.55
VPS16-207ENST00000481812 UNC13BO14795 1591 aa30.97■■■□□ 2.55
VPS16-207ENST00000481812 MROH1Q8NDA8 1641 aa30.95■■■□□ 2.55
VPS16-207ENST00000481812 RAB3GAP2Q9H2M9 1393 aa30.95■■■□□ 2.55
VPS16-207ENST00000481812 FAM135AQ9P2D6 1515 aa30.95■■■□□ 2.55
VPS16-207ENST00000481812 PRDM15P57071 1507 aaPredicted RBP30.94■■■□□ 2.54
VPS16-207ENST00000481812 GGT6Q6P531 493 aa30.92■■■□□ 2.54
VPS16-207ENST00000481812 KDM5DQ9BY66 1539 aa30.89■■■□□ 2.54
VPS16-207ENST00000481812 VWDEQ8N2E2 1590 aa30.89■■■□□ 2.54
VPS16-207ENST00000481812 KANK1Q14678 1352 aa30.88■■■□□ 2.53
VPS16-207ENST00000481812 ADAMTSL3P82987 1691 aa30.87■■■□□ 2.53
VPS16-207ENST00000481812 MLECQ14165 292 aa30.86■■■□□ 2.53
VPS16-207ENST00000481812 ZC3H13Q5T200 1668 aaKnown RBP30.86■■■□□ 2.53
VPS16-207ENST00000481812 IQGAP3Q86VI3 1631 aa30.84■■■□□ 2.53
VPS16-207ENST00000481812 NUP155O75694 1391 aa30.82■■■□□ 2.52
VPS16-207ENST00000481812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.82■■■□□ 2.52
VPS16-207ENST00000481812 LMTK2Q8IWU2 1503 aa30.82■■■□□ 2.52
VPS16-207ENST00000481812 FER1L4A9Z1Z3 1794 aa30.82■■■□□ 2.52
VPS16-207ENST00000481812 CNTLNQ9NXG0 1405 aa30.81■■■□□ 2.52
VPS16-207ENST00000481812 ABCC3O15438 1527 aa30.8■■■□□ 2.52
VPS16-207ENST00000481812 WASHC2CQ9Y4E1 1318 aa30.79■■■□□ 2.52
VPS16-207ENST00000481812 CEP152O94986 1710 aa30.78■■■□□ 2.52
VPS16-207ENST00000481812 TRIM52Q96A61 297 aa30.78■■■□□ 2.52
VPS16-207ENST00000481812 MROH2AA6NES4 1674 aa30.78■■■□□ 2.52
VPS16-207ENST00000481812 ESF1Q9H501 851 aaKnown RBP30.77■■■□□ 2.52
VPS16-207ENST00000481812 CLTCQ00610 1675 aaKnown RBP30.77■■■□□ 2.52
VPS16-207ENST00000481812 MADDQ8WXG6 1647 aa30.76■■■□□ 2.52
VPS16-207ENST00000481812 TET3O43151 1660 aa30.75■■■□□ 2.51
VPS16-207ENST00000481812 PZPP20742 1482 aa30.73■■■□□ 2.51
VPS16-207ENST00000481812 CAMSAP1Q5T5Y3 1602 aa30.72■■■□□ 2.51
VPS16-207ENST00000481812 ARHGAP31Q2M1Z3 1444 aa30.71■■■□□ 2.51
VPS16-207ENST00000481812 RIMS1Q86UR5 1692 aaKnown RBP30.69■■■□□ 2.5
VPS16-207ENST00000481812 EFCAB6Q5THR3 1501 aa30.68■■■□□ 2.5
VPS16-207ENST00000481812 ZMYM3Q14202 1370 aa30.66■■■□□ 2.5
VPS16-207ENST00000481812 MPHOSPH9Q99550 1183 aa30.66■■■□□ 2.5
VPS16-207ENST00000481812 SLC4A1APQ9BWU0 796 aaKnown RBP30.66■■■□□ 2.5
VPS16-207ENST00000481812 RPRD2Q5VT52 1461 aaKnown RBP30.65■■■□□ 2.5
VPS16-207ENST00000481812 KDM4FA0A1W2PPD8 638 aa30.64■■■□□ 2.5
VPS16-207ENST00000481812 E9PCH4 1651 aa30.63■■■□□ 2.49
VPS16-207ENST00000481812 C3P01024 1663 aa30.62■■■□□ 2.49
VPS16-207ENST00000481812 NPATQ14207 1427 aa30.6■■■□□ 2.49
VPS16-207ENST00000481812 PTPRMP28827 1452 aa30.58■■■□□ 2.49
VPS16-207ENST00000481812 PKD2Q13563 968 aa30.58■■■□□ 2.49
VPS16-207ENST00000481812 CFAP65Q6ZU64 1925 aaKnown RBP30.55■■■□□ 2.48
VPS16-207ENST00000481812 PREX1Q8TCU6 1659 aa30.54■■■□□ 2.48
VPS16-207ENST00000481812 SPATA31D1Q6ZQQ2 1576 aa30.52■■■□□ 2.48
VPS16-207ENST00000481812 DHX57Q6P158 1386 aaKnown RBP30.52■■■□□ 2.48
VPS16-207ENST00000481812 NOS1P29475 1434 aa30.51■■■□□ 2.47
VPS16-207ENST00000481812 ERVK-7P63135 1459 aa30.5■■■□□ 2.47
VPS16-207ENST00000481812 SETD1BQ9UPS6 1966 aaKnown RBP30.5■■■□□ 2.47
VPS16-207ENST00000481812 PTPRTO14522 1441 aa30.5■■■□□ 2.47
VPS16-207ENST00000481812 SPHKAPQ2M3C7 1700 aa30.5■■■□□ 2.47
VPS16-207ENST00000481812 CEBPAP49715 358 aaPredicted RBP30.49■■■□□ 2.47
VPS16-207ENST00000481812 FBXO31Q5XUX0 539 aaPredicted RBP30.46■■■□□ 2.47
VPS16-207ENST00000481812 TRPM2O94759 1503 aa30.42■■■□□ 2.46
VPS16-207ENST00000481812 FOXD1Q16676 465 aa30.42■■■□□ 2.46
VPS16-207ENST00000481812 PLA2R1Q13018 1463 aa30.42■■■□□ 2.46
VPS16-207ENST00000481812 TNRQ92752 1358 aa30.41■■■□□ 2.46
VPS16-207ENST00000481812 SYNMO15061 1565 aa30.41■■■□□ 2.46
VPS16-207ENST00000481812 ANKRD30BQ9BXX2 1392 aa30.41■■■□□ 2.46
VPS16-207ENST00000481812 SLC52A1Q9NWF4 448 aa30.38■■■□□ 2.45
VPS16-207ENST00000481812 PIK3C2BO00750 1634 aa30.37■■■□□ 2.45
VPS16-207ENST00000481812 PLPPR3Q6T4P5 718 aa30.35■■■□□ 2.45
VPS16-207ENST00000481812 NLRP1Q9C000 1473 aa30.35■■■□□ 2.45
VPS16-207ENST00000481812 CLSPNQ9HAW4 1339 aa30.33■■■□□ 2.45
VPS16-207ENST00000481812 MYO3AQ8NEV4 1616 aa30.31■■■□□ 2.44
VPS16-207ENST00000481812 CCDC144AA2RUR9 1427 aa30.3■■■□□ 2.44
VPS16-207ENST00000481812 CLTCL1P53675 1640 aa30.3■■■□□ 2.44
VPS16-207ENST00000481812 IDI1Q13907 227 aa30.29■■■□□ 2.44
VPS16-207ENST00000481812 KDM5AP29375 1690 aaKnown RBP30.29■■■□□ 2.44
VPS16-207ENST00000481812 ZNF142P52746 1687 aaPredicted RBP30.27■■■□□ 2.44
VPS16-207ENST00000481812 UGGT1Q9NYU2 1555 aa30.27■■■□□ 2.44
VPS16-207ENST00000481812 KIF1BO60333 1816 aa30.26■■■□□ 2.44
VPS16-207ENST00000481812 A2ML1A8K2U0 1454 aa30.25■■■□□ 2.43
VPS16-207ENST00000481812 UHRF1BP1Q6BDS2 1440 aa30.25■■■□□ 2.43
VPS16-207ENST00000481812 CCER1Q8TC90 406 aaPredicted RBP30.24■■■□□ 2.43
VPS16-207ENST00000481812 NEURL4Q96JN8 1562 aa30.23■■■□□ 2.43
VPS16-207ENST00000481812 CEP170BQ9Y4F5 1589 aaPredicted RBP30.23■■■□□ 2.43
VPS16-207ENST00000481812 UBR1Q8IWV7 1749 aa30.2■■■□□ 2.43
VPS16-207ENST00000481812 TMEM131LA2VDJ0 1609 aa30.2■■■□□ 2.43
VPS16-207ENST00000481812 ADGRB3O60242 1522 aa30.2■■■□□ 2.42
VPS16-207ENST00000481812 MYO5BQ9ULV0 1848 aa30.15■■■□□ 2.42
VPS16-207ENST00000481812 SPATA31E1Q6ZUB1 1445 aa30.14■■■□□ 2.42
VPS16-207ENST00000481812 THEMISQ8N1K5 641 aaPredicted RBP30.13■■■□□ 2.41
VPS16-207ENST00000481812 STAG3Q9UJ98 1225 aa30.13■■■□□ 2.41
VPS16-207ENST00000481812 SIN3AQ96ST3 1273 aa30.12■■■□□ 2.41
VPS16-207ENST00000481812 CHGAP10645 457 aaKnown RBP30.1■■■□□ 2.41
VPS16-207ENST00000481812 LMTK3Q96Q04 1460 aa30.1■■■□□ 2.41
VPS16-207ENST00000481812 SLIT1O75093 1534 aa30.06■■■□□ 2.4
VPS16-207ENST00000481812 RPGRIP1LQ68CZ1 1315 aa30.06■■■□□ 2.4
VPS16-207ENST00000481812 NEUROD1Q13562 356 aa30.05■■■□□ 2.4
VPS16-207ENST00000481812 ARHGAP23Q9P227 1491 aa30.05■■■□□ 2.4
VPS16-207ENST00000481812 AEBP2Q6ZN18 517 aaPredicted RBP30.04■■■□□ 2.4
VPS16-207ENST00000481812 TMEM2Q9UHN6 1383 aa30.03■■■□□ 2.4
VPS16-207ENST00000481812 HDGFP51858 240 aaKnown RBP30.01■■■□□ 2.39
VPS16-207ENST00000481812 ZNF326Q5BKZ1 582 aaKnown RBP30.01■■■□□ 2.39
VPS16-207ENST00000481812 STAC3Q96MF2 364 aa30.01■■■□□ 2.39
VPS16-207ENST00000481812 IFT172Q9UG01 1749 aa30.01■■■□□ 2.39
VPS16-207ENST00000481812 ZFYVE9O95405 1425 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms