RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 TBC1D12O60347 775 aa11.06□□□□□ -0.64
UPF3A-207ENST00000481131 AK7Q96M32 723 aa11.05□□□□□ -0.64
UPF3A-207ENST00000481131 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
UPF3A-207ENST00000481131 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
UPF3A-207ENST00000481131 AXIN2Q9Y2T1 843 aa11.04□□□□□ -0.64
UPF3A-207ENST00000481131 KRI1Q8N9T8 703 aaKnown RBP11.03□□□□□ -0.64
UPF3A-207ENST00000481131 TRIM66O15016 1216 aa11□□□□□ -0.65
UPF3A-207ENST00000481131 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
UPF3A-207ENST00000481131 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
UPF3A-207ENST00000481131 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
UPF3A-207ENST00000481131 MYT1LQ9UL68 1186 aa10.98□□□□□ -0.65
UPF3A-207ENST00000481131 GTF3C3Q9Y5Q9 886 aa10.98□□□□□ -0.65
UPF3A-207ENST00000481131 FECHP22830 423 aa10.97□□□□□ -0.65
UPF3A-207ENST00000481131 PBX2P40425 430 aa10.97□□□□□ -0.65
UPF3A-207ENST00000481131 FCHSD2O94868 740 aa10.96□□□□□ -0.65
UPF3A-207ENST00000481131 PSEN2P49810 448 aa10.96□□□□□ -0.65
UPF3A-207ENST00000481131 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
UPF3A-207ENST00000481131 GNPATO15228 680 aa10.95□□□□□ -0.66
UPF3A-207ENST00000481131 MAP2K5Q13163 448 aa10.95□□□□□ -0.66
UPF3A-207ENST00000481131 PTGDRQ13258 359 aa10.95□□□□□ -0.66
UPF3A-207ENST00000481131 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
UPF3A-207ENST00000481131 MINK1Q8N4C8 1332 aaPredicted RBP10.94□□□□□ -0.66
UPF3A-207ENST00000481131 PHF14O94880 888 aa10.94□□□□□ -0.66
UPF3A-207ENST00000481131 FOSBP53539 338 aa10.94□□□□□ -0.66
UPF3A-207ENST00000481131 PDE4DQ08499 809 aa10.94□□□□□ -0.66
UPF3A-207ENST00000481131 HIC1Q14526 733 aa10.94□□□□□ -0.66
UPF3A-207ENST00000481131 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
UPF3A-207ENST00000481131 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
UPF3A-207ENST00000481131 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
UPF3A-207ENST00000481131 IRF6O14896 467 aa10.93□□□□□ -0.66
UPF3A-207ENST00000481131 EN1Q05925 392 aaPredicted RBP10.93□□□□□ -0.66
UPF3A-207ENST00000481131 CCDC102AQ96A19 550 aa10.93□□□□□ -0.66
UPF3A-207ENST00000481131 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
UPF3A-207ENST00000481131 EPAS1Q99814 870 aa10.92□□□□□ -0.66
UPF3A-207ENST00000481131 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
UPF3A-207ENST00000481131 PSDA5PKW4 1024 aaPredicted RBP10.91□□□□□ -0.66
UPF3A-207ENST00000481131 KDM4CQ9H3R0 1056 aa10.91□□□□□ -0.66
UPF3A-207ENST00000481131 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
UPF3A-207ENST00000481131 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
UPF3A-207ENST00000481131 JPH4Q96JJ6 628 aa10.89□□□□□ -0.67
UPF3A-207ENST00000481131 ADAM33Q9BZ11 813 aa10.89□□□□□ -0.67
UPF3A-207ENST00000481131 MAP3K7O43318 606 aa10.88□□□□□ -0.67
UPF3A-207ENST00000481131 TSR1Q2NL82 804 aaKnown RBP10.88□□□□□ -0.67
UPF3A-207ENST00000481131 TYW1BQ6NUM6 668 aa10.88□□□□□ -0.67
UPF3A-207ENST00000481131 KCNK17Q96T54 332 aa10.88□□□□□ -0.67
UPF3A-207ENST00000481131 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
UPF3A-207ENST00000481131 AMHR2Q16671 573 aa10.85□□□□□ -0.67
UPF3A-207ENST00000481131 BCL2L12Q9HB09 334 aa10.85□□□□□ -0.67
UPF3A-207ENST00000481131 FBXW7Q969H0 707 aa10.84□□□□□ -0.67
UPF3A-207ENST00000481131 ADGRD1Q6QNK2 874 aa10.83□□□□□ -0.68
UPF3A-207ENST00000481131 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
UPF3A-207ENST00000481131 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
UPF3A-207ENST00000481131 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
UPF3A-207ENST00000481131 HRO43593 1189 aa10.82□□□□□ -0.68
UPF3A-207ENST00000481131 TK2O00142 265 aa10.81□□□□□ -0.68
UPF3A-207ENST00000481131 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
UPF3A-207ENST00000481131 COL9A1P20849 921 aa10.79□□□□□ -0.68
UPF3A-207ENST00000481131 C6orf132Q5T0Z8 1188 aa10.79□□□□□ -0.68
UPF3A-207ENST00000481131 PLEKHG3A1L390 1219 aa10.77□□□□□ -0.69
UPF3A-207ENST00000481131 PTPREP23469 700 aa10.77□□□□□ -0.69
UPF3A-207ENST00000481131 PHOX2BQ99453 314 aa10.76□□□□□ -0.69
UPF3A-207ENST00000481131 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
UPF3A-207ENST00000481131 REPIN1Q9BWE0 567 aaKnown RBP10.76□□□□□ -0.69
UPF3A-207ENST00000481131 VPS9D1Q9Y2B5 631 aa10.76□□□□□ -0.69
UPF3A-207ENST00000481131 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
UPF3A-207ENST00000481131 TTLL12Q14166 644 aaPredicted RBP10.74□□□□□ -0.69
UPF3A-207ENST00000481131 PADI6Q6TGC4 694 aa10.74□□□□□ -0.69
UPF3A-207ENST00000481131 PROX2Q3B8N5 592 aa10.73□□□□□ -0.69
UPF3A-207ENST00000481131 TTC13Q8NBP0 860 aa10.73□□□□□ -0.69
UPF3A-207ENST00000481131 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
UPF3A-207ENST00000481131 GIGYF2Q6Y7W6 1299 aaKnown RBP10.72□□□□□ -0.69
UPF3A-207ENST00000481131 MS4A1P11836 297 aa10.71□□□□□ -0.69
UPF3A-207ENST00000481131 CERKQ8TCT0 537 aa10.71□□□□□ -0.69
UPF3A-207ENST00000481131 DAXXQ9UER7 740 aaPredicted RBP10.71□□□□□ -0.69
UPF3A-207ENST00000481131 SLC4A5Q9BY07 1137 aa10.7□□□□□ -0.7
UPF3A-207ENST00000481131 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
UPF3A-207ENST00000481131 PPP1R3GB7ZBB8 358 aa10.69□□□□□ -0.7
UPF3A-207ENST00000481131 BHMG1C9JSJ3 638 aaPredicted RBP10.69□□□□□ -0.7
UPF3A-207ENST00000481131 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
UPF3A-207ENST00000481131 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
UPF3A-207ENST00000481131 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
UPF3A-207ENST00000481131 RBM27Q9P2N5 1060 aaKnown RBP10.69□□□□□ -0.7
UPF3A-207ENST00000481131 MDM2Q00987 491 aaPredicted RBP10.68□□□□□ -0.7
UPF3A-207ENST00000481131 KCNH8Q96L42 1107 aa10.68□□□□□ -0.7
UPF3A-207ENST00000481131 HCSTQ9UBK5 93 aa10.68□□□□□ -0.7
UPF3A-207ENST00000481131 PRSS12P56730 875 aa10.67□□□□□ -0.7
UPF3A-207ENST00000481131 C14orf37Q86TY3 774 aa10.67□□□□□ -0.7
UPF3A-207ENST00000481131 FAM198AQ9UFP1 575 aa10.67□□□□□ -0.7
UPF3A-207ENST00000481131 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
UPF3A-207ENST00000481131 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
UPF3A-207ENST00000481131 OATP04181 439 aa10.65□□□□□ -0.7
UPF3A-207ENST00000481131 CLCN1P35523 988 aa10.65□□□□□ -0.7
UPF3A-207ENST00000481131 ERICH6Q7L0X2 663 aa10.65□□□□□ -0.7
UPF3A-207ENST00000481131 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
UPF3A-207ENST00000481131 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
UPF3A-207ENST00000481131 KCTD12Q96CX2 325 aaKnown RBP10.62□□□□□ -0.71
UPF3A-207ENST00000481131 SSTR3P32745 418 aaPredicted RBP10.61□□□□□ -0.71
UPF3A-207ENST00000481131 FAM217BQ9NTX9 383 aaPredicted RBP10.61□□□□□ -0.71
UPF3A-207ENST00000481131 TSKSQ9UJT2 592 aa10.61□□□□□ -0.71
UPF3A-207ENST00000481131 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms