RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 DEPDC5O75140 1603 aa17.49■□□□□ 0.39
TM9SF4-206ENST00000479591 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
TM9SF4-206ENST00000479591 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
TM9SF4-206ENST00000479591 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
TM9SF4-206ENST00000479591 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
TM9SF4-206ENST00000479591 FAM135AQ9P2D6 1515 aa17.46■□□□□ 0.39
TM9SF4-206ENST00000479591 COL17A1Q9UMD9 1497 aaPredicted RBP17.44■□□□□ 0.38
TM9SF4-206ENST00000479591 RNF17Q9BXT8 1623 aaKnown RBP17.43■□□□□ 0.38
TM9SF4-206ENST00000479591 YEATS2Q9ULM3 1422 aa17.43■□□□□ 0.38
TM9SF4-206ENST00000479591 REREQ9P2R6 1566 aa17.43■□□□□ 0.38
TM9SF4-206ENST00000479591 PRDM15P57071 1507 aaPredicted RBP17.42■□□□□ 0.38
TM9SF4-206ENST00000479591 KANK1Q14678 1352 aa17.41■□□□□ 0.38
TM9SF4-206ENST00000479591 KIF3BO15066 747 aa17.41■□□□□ 0.38
TM9SF4-206ENST00000479591 ATP10AO60312 1499 aa17.41■□□□□ 0.38
TM9SF4-206ENST00000479591 VWDEQ8N2E2 1590 aa17.4■□□□□ 0.38
TM9SF4-206ENST00000479591 MROH1Q8NDA8 1641 aa17.4■□□□□ 0.38
TM9SF4-206ENST00000479591 PKD2Q13563 968 aa17.4■□□□□ 0.38
TM9SF4-206ENST00000479591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
TM9SF4-206ENST00000479591 TIMELESSQ9UNS1 1208 aa17.4■□□□□ 0.38
TM9SF4-206ENST00000479591 ARHGEF40Q8TER5 1519 aa17.4■□□□□ 0.38
TM9SF4-206ENST00000479591 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
TM9SF4-206ENST00000479591 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
TM9SF4-206ENST00000479591 TET3O43151 1660 aa17.36■□□□□ 0.37
TM9SF4-206ENST00000479591 AGLP35573 1532 aa17.36■□□□□ 0.37
TM9SF4-206ENST00000479591 LMTK2Q8IWU2 1503 aa17.36■□□□□ 0.37
TM9SF4-206ENST00000479591 FOXD1Q16676 465 aa17.35■□□□□ 0.37
TM9SF4-206ENST00000479591 NEUROD1Q13562 356 aa17.34■□□□□ 0.37
TM9SF4-206ENST00000479591 RPRD2Q5VT52 1461 aaKnown RBP17.33■□□□□ 0.37
TM9SF4-206ENST00000479591 ZC3H13Q5T200 1668 aaKnown RBP17.32■□□□□ 0.36
TM9SF4-206ENST00000479591 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
TM9SF4-206ENST00000479591 E9PCH4 1651 aa17.31■□□□□ 0.36
TM9SF4-206ENST00000479591 CEP152O94986 1710 aa17.3■□□□□ 0.36
TM9SF4-206ENST00000479591 EFCAB6Q5THR3 1501 aa17.3■□□□□ 0.36
TM9SF4-206ENST00000479591 GGT6Q6P531 493 aa17.29■□□□□ 0.36
TM9SF4-206ENST00000479591 ABCC3O15438 1527 aa17.28■□□□□ 0.36
TM9SF4-206ENST00000479591 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
TM9SF4-206ENST00000479591 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
TM9SF4-206ENST00000479591 WASHC2CQ9Y4E1 1318 aa17.25■□□□□ 0.35
TM9SF4-206ENST00000479591 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
TM9SF4-206ENST00000479591 TRPM2O94759 1503 aa17.25■□□□□ 0.35
TM9SF4-206ENST00000479591 CAMSAP1Q5T5Y3 1602 aa17.25■□□□□ 0.35
TM9SF4-206ENST00000479591 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
TM9SF4-206ENST00000479591 SIGLEC1Q9BZZ2 1709 aa17.24■□□□□ 0.35
TM9SF4-206ENST00000479591 PTPRTO14522 1441 aa17.24■□□□□ 0.35
TM9SF4-206ENST00000479591 ARHGAP31Q2M1Z3 1444 aa17.22■□□□□ 0.35
TM9SF4-206ENST00000479591 PPP1R15AO75807 674 aaPredicted RBP17.2■□□□□ 0.34
TM9SF4-206ENST00000479591 NPATQ14207 1427 aa17.2■□□□□ 0.34
TM9SF4-206ENST00000479591 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
TM9SF4-206ENST00000479591 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
TM9SF4-206ENST00000479591 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
TM9SF4-206ENST00000479591 NEURL4Q96JN8 1562 aa17.15■□□□□ 0.34
TM9SF4-206ENST00000479591 CLTCL1P53675 1640 aa17.15■□□□□ 0.34
TM9SF4-206ENST00000479591 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
TM9SF4-206ENST00000479591 NOS1P29475 1434 aa17.13■□□□□ 0.33
TM9SF4-206ENST00000479591 MLECQ14165 292 aa17.12■□□□□ 0.33
TM9SF4-206ENST00000479591 ESF1Q9H501 851 aaKnown RBP17.12■□□□□ 0.33
TM9SF4-206ENST00000479591 PREX1Q8TCU6 1659 aa17.12■□□□□ 0.33
TM9SF4-206ENST00000479591 KIF1BO60333 1816 aa17.12■□□□□ 0.33
TM9SF4-206ENST00000479591 SPATA31E1Q6ZUB1 1445 aa17.11■□□□□ 0.33
TM9SF4-206ENST00000479591 MROH2AA6NES4 1674 aa17.1■□□□□ 0.33
TM9SF4-206ENST00000479591 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
TM9SF4-206ENST00000479591 SYNMO15061 1565 aa17.09■□□□□ 0.33
TM9SF4-206ENST00000479591 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
TM9SF4-206ENST00000479591 UHRF1BP1Q6BDS2 1440 aa17.08■□□□□ 0.32
TM9SF4-206ENST00000479591 UGGT1Q9NYU2 1555 aa17.07■□□□□ 0.32
TM9SF4-206ENST00000479591 ERVK-7P63135 1459 aa17.07■□□□□ 0.32
TM9SF4-206ENST00000479591 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
TM9SF4-206ENST00000479591 STAC3Q96MF2 364 aa17.06■□□□□ 0.32
TM9SF4-206ENST00000479591 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
TM9SF4-206ENST00000479591 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
TM9SF4-206ENST00000479591 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
TM9SF4-206ENST00000479591 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
TM9SF4-206ENST00000479591 RGL3Q3MIN7 710 aa17.04■□□□□ 0.32
TM9SF4-206ENST00000479591 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
TM9SF4-206ENST00000479591 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
TM9SF4-206ENST00000479591 NBPF8Q3BBV2 869 aa17.01■□□□□ 0.31
TM9SF4-206ENST00000479591 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
TM9SF4-206ENST00000479591 PRAG1Q86YV5 1406 aa17■□□□□ 0.31
TM9SF4-206ENST00000479591 IFT172Q9UG01 1749 aa17■□□□□ 0.31
TM9SF4-206ENST00000479591 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
TM9SF4-206ENST00000479591 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
TM9SF4-206ENST00000479591 MYOM2P54296 1465 aa16.99■□□□□ 0.31
TM9SF4-206ENST00000479591 RPGRIP1LQ68CZ1 1315 aa16.98■□□□□ 0.31
TM9SF4-206ENST00000479591 IDI1Q13907 227 aa16.98■□□□□ 0.31
TM9SF4-206ENST00000479591 C3P01024 1663 aa16.97■□□□□ 0.31
TM9SF4-206ENST00000479591 TMEM131LA2VDJ0 1609 aa16.97■□□□□ 0.31
TM9SF4-206ENST00000479591 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
TM9SF4-206ENST00000479591 TRPM1Q7Z4N2 1603 aa16.96■□□□□ 0.31
TM9SF4-206ENST00000479591 MADDQ8WXG6 1647 aa16.96■□□□□ 0.31
TM9SF4-206ENST00000479591 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
TM9SF4-206ENST00000479591 ADAMTSL3P82987 1691 aa16.96■□□□□ 0.31
TM9SF4-206ENST00000479591 PPLO60437 1756 aa16.95■□□□□ 0.3
TM9SF4-206ENST00000479591 TNRQ92752 1358 aa16.94■□□□□ 0.3
TM9SF4-206ENST00000479591 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
TM9SF4-206ENST00000479591 KIAA1210Q9ULL0 1709 aa16.93■□□□□ 0.3
TM9SF4-206ENST00000479591 LAMC1P11047 1609 aa16.92■□□□□ 0.3
TM9SF4-206ENST00000479591 RIMS1Q86UR5 1692 aaKnown RBP16.92■□□□□ 0.3
TM9SF4-206ENST00000479591 MYO5BQ9ULV0 1848 aa16.92■□□□□ 0.3
TM9SF4-206ENST00000479591 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
TM9SF4-206ENST00000479591 NRXN1Q9ULB1 1477 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms