RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 PCDHGA10Q9Y5H3 936 aa8.85□□□□□ -0.99
NF1-209ENST00000479536 Q6ZNB5 142 aa8.83□□□□□ -1
NF1-209ENST00000479536 SOWAHBA6NEL2 793 aa8.82□□□□□ -1
NF1-209ENST00000479536 EMILIN3Q9NT22 766 aa8.82□□□□□ -1
NF1-209ENST00000479536 TYW1BQ6NUM6 668 aa8.81□□□□□ -1
NF1-209ENST00000479536 LAPTM4BQ86VI4 370 aa8.81□□□□□ -1
NF1-209ENST00000479536 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
NF1-209ENST00000479536 MFSD10Q14728 455 aa8.8□□□□□ -1
NF1-209ENST00000479536 FBXW7Q969H0 707 aa8.8□□□□□ -1
NF1-209ENST00000479536 ZFRQ96KR1 1074 aaKnown RBP8.8□□□□□ -1
NF1-209ENST00000479536 WBP1LQ9NX94 342 aa8.8□□□□□ -1
NF1-209ENST00000479536 GTPBP6O43824 516 aaPredicted RBP8.79□□□□□ -1
NF1-209ENST00000479536 PHF14O94880 888 aa8.78□□□□□ -1
NF1-209ENST00000479536 KCNC4Q03721 635 aa8.78□□□□□ -1
NF1-209ENST00000479536 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
NF1-209ENST00000479536 SEPT9Q9UHD8 586 aaPredicted RBP8.78□□□□□ -1
NF1-209ENST00000479536 ONECUT3O60422 494 aaPredicted RBP8.74□□□□□ -1.01
NF1-209ENST00000479536 C6orf132Q5T0Z8 1188 aa8.74□□□□□ -1.01
NF1-209ENST00000479536 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
NF1-209ENST00000479536 TRIM6-TRIM34B2RNG4 842 aa8.72□□□□□ -1.01
NF1-209ENST00000479536 FAM98CQ17RN3 349 aaKnown RBP8.72□□□□□ -1.01
NF1-209ENST00000479536 LRCH3Q96II8 777 aa8.72□□□□□ -1.01
NF1-209ENST00000479536 EPAS1Q99814 870 aa8.72□□□□□ -1.01
NF1-209ENST00000479536 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.72□□□□□ -1.01
NF1-209ENST00000479536 TSR3Q9UJK0 312 aaKnown RBP8.72□□□□□ -1.01
NF1-209ENST00000479536 RBM33Q96EV2 1170 aaKnown RBP8.71□□□□□ -1.02
NF1-209ENST00000479536 CADPS2Q86UW7 1296 aa8.7□□□□□ -1.02
NF1-209ENST00000479536 LAPTM4AQ15012 233 aa8.69□□□□□ -1.02
NF1-209ENST00000479536 DPYSL4O14531 572 aa8.68□□□□□ -1.02
NF1-209ENST00000479536 GFRA3O60609 400 aa8.68□□□□□ -1.02
NF1-209ENST00000479536 DDX12PQ92771 950 aa8.66□□□□□ -1.02
NF1-209ENST00000479536 DCAF8L2P0C7V8 631 aa8.65□□□□□ -1.02
NF1-209ENST00000479536 TRAF7Q6Q0C0 670 aa8.65□□□□□ -1.02
NF1-209ENST00000479536 LCE2BO14633 110 aa8.64□□□□□ -1.03
NF1-209ENST00000479536 PPP4CP60510 307 aa8.64□□□□□ -1.03
NF1-209ENST00000479536 PACS2Q86VP3 889 aa8.64□□□□□ -1.03
NF1-209ENST00000479536 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
NF1-209ENST00000479536 PRKD2Q9BZL6 878 aa8.63□□□□□ -1.03
NF1-209ENST00000479536 TSKSQ9UJT2 592 aa8.63□□□□□ -1.03
NF1-209ENST00000479536 MAP3K7O43318 606 aa8.61□□□□□ -1.03
NF1-209ENST00000479536 NBR1Q14596 966 aa8.61□□□□□ -1.03
NF1-209ENST00000479536 TSR1Q2NL82 804 aaKnown RBP8.61□□□□□ -1.03
NF1-209ENST00000479536 EN1Q05925 392 aaPredicted RBP8.6□□□□□ -1.03
NF1-209ENST00000479536 TJAP1Q5JTD0 557 aa8.6□□□□□ -1.03
NF1-209ENST00000479536 SMAPO00193 183 aa8.59□□□□□ -1.03
NF1-209ENST00000479536 SAMD7Q7Z3H4 446 aa8.59□□□□□ -1.03
NF1-209ENST00000479536 NRG2O14511 850 aaPredicted RBP8.57□□□□□ -1.04
NF1-209ENST00000479536 PPP1R18Q6NYC8 613 aa8.57□□□□□ -1.04
NF1-209ENST00000479536 MTRQ99707 1265 aa8.57□□□□□ -1.04
NF1-209ENST00000479536 IL21Q9HBE4 155 aa8.57□□□□□ -1.04
NF1-209ENST00000479536 CDCA7LQ96GN5 454 aa8.56□□□□□ -1.04
NF1-209ENST00000479536 RNF40O75150 1001 aa8.54□□□□□ -1.04
NF1-209ENST00000479536 PRSS12P56730 875 aa8.54□□□□□ -1.04
NF1-209ENST00000479536 V9GY48 417 aaPredicted RBP8.54□□□□□ -1.04
NF1-209ENST00000479536 ZNF516Q92618 1163 aa8.53□□□□□ -1.04
NF1-209ENST00000479536 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.53□□□□□ -1.04
NF1-209ENST00000479536 FAM198AQ9UFP1 575 aa8.53□□□□□ -1.04
NF1-209ENST00000479536 PDIA6Q15084 440 aa8.52□□□□□ -1.05
NF1-209ENST00000479536 TATDN2Q93075 761 aa8.52□□□□□ -1.05
NF1-209ENST00000479536 PNMA3Q9UL41 463 aa8.52□□□□□ -1.05
NF1-209ENST00000479536 NBPF26B4DH59 902 aa8.51□□□□□ -1.05
NF1-209ENST00000479536 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
NF1-209ENST00000479536 ZNF787Q6DD87 383 aa8.5□□□□□ -1.05
NF1-209ENST00000479536 CERKQ8TCT0 537 aa8.5□□□□□ -1.05
NF1-209ENST00000479536 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
NF1-209ENST00000479536 SPDYE16A6NNV3 312 aaPredicted RBP8.49□□□□□ -1.05
NF1-209ENST00000479536 APLP1P51693 650 aa8.49□□□□□ -1.05
NF1-209ENST00000479536 HDGFP51858 240 aaKnown RBP8.49□□□□□ -1.05
NF1-209ENST00000479536 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
NF1-209ENST00000479536 GRXCR2A6NFK2 248 aa8.48□□□□□ -1.05
NF1-209ENST00000479536 PRIM1P49642 420 aaKnown RBP8.48□□□□□ -1.05
NF1-209ENST00000479536 NUDT18Q6ZVK8 323 aa8.47□□□□□ -1.05
NF1-209ENST00000479536 GGCXP38435 758 aa8.46□□□□□ -1.06
NF1-209ENST00000479536 COPS2P61201 443 aa8.46□□□□□ -1.06
NF1-209ENST00000479536 PLCB2Q00722 1185 aa8.45□□□□□ -1.06
NF1-209ENST00000479536 CDHR5Q9HBB8 845 aa8.44□□□□□ -1.06
NF1-209ENST00000479536 ZNF775Q96BV0 537 aaPredicted RBP8.42□□□□□ -1.06
NF1-209ENST00000479536 SWT1Q5T5J6 900 aaKnown RBP8.41□□□□□ -1.06
NF1-209ENST00000479536 NECTIN2Q92692 538 aa8.41□□□□□ -1.06
NF1-209ENST00000479536 E2F4Q16254 413 aa8.4□□□□□ -1.06
NF1-209ENST00000479536 SLF2Q8IX21 1173 aa8.4□□□□□ -1.06
NF1-209ENST00000479536 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
NF1-209ENST00000479536 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
NF1-209ENST00000479536 ZPR1O75312 459 aa8.38□□□□□ -1.07
NF1-209ENST00000479536 OSBPP22059 807 aa8.38□□□□□ -1.07
NF1-209ENST00000479536 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
NF1-209ENST00000479536 PADI6Q6TGC4 694 aa8.37□□□□□ -1.07
NF1-209ENST00000479536 SLC19A1P41440 591 aa8.36□□□□□ -1.07
NF1-209ENST00000479536 TRIM67Q6ZTA4 783 aa8.35□□□□□ -1.07
NF1-209ENST00000479536 BBXQ8WY36 941 aaPredicted RBP8.35□□□□□ -1.07
NF1-209ENST00000479536 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
NF1-209ENST00000479536 RNF223E7ERA6 249 aa8.34□□□□□ -1.07
NF1-209ENST00000479536 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
NF1-209ENST00000479536 TTC13Q8NBP0 860 aa8.34□□□□□ -1.07
NF1-209ENST00000479536 WDR70Q9NW82 654 aa8.34□□□□□ -1.07
NF1-209ENST00000479536 ARIH1Q9Y4X5 557 aaPredicted RBP8.34□□□□□ -1.07
NF1-209ENST00000479536 HAP1P54257 671 aaPredicted RBP8.33□□□□□ -1.08
NF1-209ENST00000479536 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
NF1-209ENST00000479536 MYT1Q01538 1121 aa8.32□□□□□ -1.08
NF1-209ENST00000479536 BLOC1S3Q6QNY0 202 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms