RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 HSPA1LP34931 641 aa10.83□□□□□ -0.68
VCP-205ENST00000479300 TIAM1Q13009 1591 aa10.82□□□□□ -0.68
VCP-205ENST00000479300 CFDP1Q9UEE9 299 aaPredicted RBP10.82□□□□□ -0.68
VCP-205ENST00000479300 POLR1AO95602 1720 aaPredicted RBP10.81□□□□□ -0.68
VCP-205ENST00000479300 FBXO31Q5XUX0 539 aaPredicted RBP10.81□□□□□ -0.68
VCP-205ENST00000479300 VWDEQ8N2E2 1590 aa10.81□□□□□ -0.68
VCP-205ENST00000479300 CCNB3Q8WWL7 1395 aa10.8□□□□□ -0.68
VCP-205ENST00000479300 SHANK2Q9UPX8 1470 aa10.8□□□□□ -0.68
VCP-205ENST00000479300 CPS1P31327 1500 aa10.79□□□□□ -0.68
VCP-205ENST00000479300 DHX29Q7Z478 1369 aaKnown RBP10.78□□□□□ -0.68
VCP-205ENST00000479300 TNRQ92752 1358 aa10.78□□□□□ -0.68
VCP-205ENST00000479300 PIP4K2BP78356 416 aa10.78□□□□□ -0.68
VCP-205ENST00000479300 PZPP20742 1482 aa10.78□□□□□ -0.68
VCP-205ENST00000479300 RTEL1-TNFRSF6BF6WH68 1400 aa10.77□□□□□ -0.68
VCP-205ENST00000479300 PPP4R3CPQ6ZMV5 832 aa10.77□□□□□ -0.69
VCP-205ENST00000479300 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.69
VCP-205ENST00000479300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.69
VCP-205ENST00000479300 KDM5DQ9BY66 1539 aa10.76□□□□□ -0.69
VCP-205ENST00000479300 SCAF1Q9H7N4 1312 aaKnown RBP10.76□□□□□ -0.69
VCP-205ENST00000479300 MTUS2Q5JR59 1369 aa10.76□□□□□ -0.69
VCP-205ENST00000479300 MED14O60244 1454 aa10.74□□□□□ -0.69
VCP-205ENST00000479300 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
VCP-205ENST00000479300 DEPDC5O75140 1603 aa10.74□□□□□ -0.69
VCP-205ENST00000479300 KIF3BO15066 747 aa10.74□□□□□ -0.69
VCP-205ENST00000479300 CEP162Q5TB80 1403 aa10.74□□□□□ -0.69
VCP-205ENST00000479300 MIA2Q96PC5 1412 aa10.74□□□□□ -0.69
VCP-205ENST00000479300 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
VCP-205ENST00000479300 TOM1O60784 492 aa10.73□□□□□ -0.69
VCP-205ENST00000479300 NPHP4O75161 1426 aaPredicted RBP10.73□□□□□ -0.69
VCP-205ENST00000479300 CAMSAP2Q08AD1 1489 aa10.73□□□□□ -0.69
VCP-205ENST00000479300 CCDC141Q6ZP82 1450 aa10.73□□□□□ -0.69
VCP-205ENST00000479300 NLRP1Q9C000 1473 aa10.72□□□□□ -0.69
VCP-205ENST00000479300 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
VCP-205ENST00000479300 UGGT1Q9NYU2 1555 aa10.72□□□□□ -0.69
VCP-205ENST00000479300 IQGAP1P46940 1657 aa10.72□□□□□ -0.69
VCP-205ENST00000479300 ANKLE2Q86XL3 938 aa10.71□□□□□ -0.69
VCP-205ENST00000479300 ZC3H13Q5T200 1668 aaKnown RBP10.7□□□□□ -0.7
VCP-205ENST00000479300 NCOA2Q15596 1464 aa10.7□□□□□ -0.7
VCP-205ENST00000479300 WASHC2CQ9Y4E1 1318 aa10.7□□□□□ -0.7
VCP-205ENST00000479300 MROH1Q8NDA8 1641 aa10.69□□□□□ -0.7
VCP-205ENST00000479300 RNF17Q9BXT8 1623 aaKnown RBP10.69□□□□□ -0.7
VCP-205ENST00000479300 ABCC3O15438 1527 aa10.69□□□□□ -0.7
VCP-205ENST00000479300 THEMISQ8N1K5 641 aaPredicted RBP10.69□□□□□ -0.7
VCP-205ENST00000479300 ARHGEF5Q12774 1597 aa10.69□□□□□ -0.7
VCP-205ENST00000479300 RGS17Q9UGC6 210 aaPredicted RBP10.68□□□□□ -0.7
VCP-205ENST00000479300 ERVK-7P63135 1459 aa10.68□□□□□ -0.7
VCP-205ENST00000479300 SYNMO15061 1565 aa10.67□□□□□ -0.7
VCP-205ENST00000479300 XIRP1Q702N8 1843 aaKnown RBP10.67□□□□□ -0.7
VCP-205ENST00000479300 UBR1Q8IWV7 1749 aa10.66□□□□□ -0.7
VCP-205ENST00000479300 MAST1Q9Y2H9 1570 aa10.65□□□□□ -0.71
VCP-205ENST00000479300 CEP152O94986 1710 aa10.64□□□□□ -0.71
VCP-205ENST00000479300 ARHGAP23Q9P227 1491 aa10.64□□□□□ -0.71
VCP-205ENST00000479300 LTKP29376 864 aa10.64□□□□□ -0.71
VCP-205ENST00000479300 EIF2AK4Q9P2K8 1649 aaKnown RBP10.62□□□□□ -0.71
VCP-205ENST00000479300 SCAF11Q99590 1463 aaKnown RBP10.62□□□□□ -0.71
VCP-205ENST00000479300 RSPH4AQ5TD94 716 aa10.62□□□□□ -0.71
VCP-205ENST00000479300 SLIT1O75093 1534 aa10.62□□□□□ -0.71
VCP-205ENST00000479300 CFAP65Q6ZU64 1925 aaKnown RBP10.6□□□□□ -0.71
VCP-205ENST00000479300 TSPY4P0CV99 314 aa10.59□□□□□ -0.71
VCP-205ENST00000479300 TSPY10P0CW01 314 aa10.59□□□□□ -0.71
VCP-205ENST00000479300 LRRC9Q6ZRR7 1453 aa10.59□□□□□ -0.71
VCP-205ENST00000479300 PIK3C2BO00750 1634 aa10.58□□□□□ -0.72
VCP-205ENST00000479300 POTEAQ6S8J7 498 aa10.58□□□□□ -0.72
VCP-205ENST00000479300 PRDM15P57071 1507 aaPredicted RBP10.58□□□□□ -0.72
VCP-205ENST00000479300 MAP3K1Q13233 1512 aa10.58□□□□□ -0.72
VCP-205ENST00000479300 TXNDC2Q86VQ3 553 aa10.57□□□□□ -0.72
VCP-205ENST00000479300 ARHGAP31Q2M1Z3 1444 aa10.57□□□□□ -0.72
VCP-205ENST00000479300 FAM135BQ49AJ0 1406 aa10.57□□□□□ -0.72
VCP-205ENST00000479300 KANK4Q5T7N3 995 aaPredicted RBP10.56□□□□□ -0.72
VCP-205ENST00000479300 DUOX2Q9NRD8 1548 aa10.56□□□□□ -0.72
VCP-205ENST00000479300 TMEM2Q9UHN6 1383 aa10.55□□□□□ -0.72
VCP-205ENST00000479300 TET3O43151 1660 aa10.55□□□□□ -0.72
VCP-205ENST00000479300 ROBO1Q9Y6N7 1651 aa10.55□□□□□ -0.72
VCP-205ENST00000479300 TMEM94Q12767 1356 aa10.54□□□□□ -0.72
VCP-205ENST00000479300 SETD1AO15047 1707 aaKnown RBP10.54□□□□□ -0.72
VCP-205ENST00000479300 MYOM3Q5VTT5 1437 aa10.54□□□□□ -0.72
VCP-205ENST00000479300 RBM33Q96EV2 1170 aaKnown RBP10.54□□□□□ -0.72
VCP-205ENST00000479300 CROCC2H7BZ55 1655 aa10.53□□□□□ -0.72
VCP-205ENST00000479300 KIF15Q9NS87 1388 aa10.53□□□□□ -0.72
VCP-205ENST00000479300 ABCC5O15440 1437 aa10.53□□□□□ -0.72
VCP-205ENST00000479300 VPS8Q8N3P4 1428 aa10.52□□□□□ -0.73
VCP-205ENST00000479300 KDM5AP29375 1690 aaKnown RBP10.52□□□□□ -0.73
VCP-205ENST00000479300 EFCAB6Q5THR3 1501 aa10.52□□□□□ -0.73
VCP-205ENST00000479300 NWD1Q149M9 1564 aa10.52□□□□□ -0.73
VCP-205ENST00000479300 ERBINQ96RT1 1412 aa10.51□□□□□ -0.73
VCP-205ENST00000479300 IDI1Q13907 227 aa10.51□□□□□ -0.73
VCP-205ENST00000479300 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
VCP-205ENST00000479300 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
VCP-205ENST00000479300 KCNA6P17658 529 aa10.5□□□□□ -0.73
VCP-205ENST00000479300 SLC4A1APQ9BWU0 796 aaKnown RBP10.5□□□□□ -0.73
VCP-205ENST00000479300 RRP7BPQ9NSQ0 103 aa10.5□□□□□ -0.73
VCP-205ENST00000479300 EID1Q9Y6B2 187 aa10.5□□□□□ -0.73
VCP-205ENST00000479300 NPM3O75607 178 aaKnown RBP10.49□□□□□ -0.73
VCP-205ENST00000479300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.733e-6■■■■□ 20.2
VCP-205ENST00000479300 NOS1P29475 1434 aa10.49□□□□□ -0.73
VCP-205ENST00000479300 ADGRB3O60242 1522 aa10.48□□□□□ -0.73
VCP-205ENST00000479300 PROSER2Q86WR7 435 aaPredicted RBP10.48□□□□□ -0.73
VCP-205ENST00000479300 NKTRP30414 1462 aaKnown RBP10.48□□□□□ -0.73
VCP-205ENST00000479300 LRP6O75581 1613 aa10.47□□□□□ -0.73
VCP-205ENST00000479300 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms