RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 A2ML1A8K2U0 1454 aa20.69■□□□□ 0.9
ABCF3-212ENST00000478288 MAST1Q9Y2H9 1570 aa20.68■□□□□ 0.9
ABCF3-212ENST00000478288 PZPP20742 1482 aa20.68■□□□□ 0.9
ABCF3-212ENST00000478288 DNMT1P26358 1616 aaKnown RBP20.67■□□□□ 0.9
ABCF3-212ENST00000478288 RNF17Q9BXT8 1623 aaKnown RBP20.64■□□□□ 0.9
ABCF3-212ENST00000478288 KIF3BO15066 747 aa20.64■□□□□ 0.89
ABCF3-212ENST00000478288 MIA2Q96PC5 1412 aa20.63■□□□□ 0.89
ABCF3-212ENST00000478288 NCKAP5LQ9HCH0 1330 aa20.63■□□□□ 0.89
ABCF3-212ENST00000478288 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
ABCF3-212ENST00000478288 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
ABCF3-212ENST00000478288 POLR1AO95602 1720 aaPredicted RBP20.62■□□□□ 0.89
ABCF3-212ENST00000478288 ZC3H13Q5T200 1668 aaKnown RBP20.62■□□□□ 0.89
ABCF3-212ENST00000478288 EIF2AK4Q9P2K8 1649 aaKnown RBP20.62■□□□□ 0.89
ABCF3-212ENST00000478288 TNRQ92752 1358 aa20.61■□□□□ 0.89
ABCF3-212ENST00000478288 MYOM3Q5VTT5 1437 aa20.61■□□□□ 0.89
ABCF3-212ENST00000478288 WASHC2CQ9Y4E1 1318 aa20.59■□□□□ 0.89
ABCF3-212ENST00000478288 NLRP1Q9C000 1473 aa20.59■□□□□ 0.89
ABCF3-212ENST00000478288 LOC105371045A0A1W2PR82 267 aa20.57■□□□□ 0.88
ABCF3-212ENST00000478288 ZNF335Q9H4Z2 1342 aaPredicted RBP20.56■□□□□ 0.88
ABCF3-212ENST00000478288 NEURL4Q96JN8 1562 aa20.56■□□□□ 0.88
ABCF3-212ENST00000478288 ABCC3O15438 1527 aa20.55■□□□□ 0.88
ABCF3-212ENST00000478288 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
ABCF3-212ENST00000478288 FBXO31Q5XUX0 539 aaPredicted RBP20.55■□□□□ 0.88
ABCF3-212ENST00000478288 MROH1Q8NDA8 1641 aa20.53■□□□□ 0.88
ABCF3-212ENST00000478288 SHANK2Q9UPX8 1470 aa20.53■□□□□ 0.88
ABCF3-212ENST00000478288 SPATA31D1Q6ZQQ2 1576 aa20.53■□□□□ 0.88
ABCF3-212ENST00000478288 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
ABCF3-212ENST00000478288 DUOX2Q9NRD8 1548 aa20.53■□□□□ 0.88
ABCF3-212ENST00000478288 CROCC2H7BZ55 1655 aa20.52■□□□□ 0.88
ABCF3-212ENST00000478288 UGGT1Q9NYU2 1555 aa20.51■□□□□ 0.87
ABCF3-212ENST00000478288 CPS1P31327 1500 aa20.5■□□□□ 0.87
ABCF3-212ENST00000478288 MED14O60244 1454 aa20.5■□□□□ 0.87
ABCF3-212ENST00000478288 THEMISQ8N1K5 641 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-212ENST00000478288 PRDM15P57071 1507 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-212ENST00000478288 PTPN23Q9H3S7 1636 aa20.47■□□□□ 0.87
ABCF3-212ENST00000478288 ERVK-7P63135 1459 aa20.47■□□□□ 0.87
ABCF3-212ENST00000478288 CEP152O94986 1710 aa20.47■□□□□ 0.87
ABCF3-212ENST00000478288 ERBINQ96RT1 1412 aa20.46■□□□□ 0.87
ABCF3-212ENST00000478288 ANKLE2Q86XL3 938 aa20.46■□□□□ 0.87
ABCF3-212ENST00000478288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.46■□□□□ 0.87
ABCF3-212ENST00000478288 DISP3Q9P2K9 1392 aa20.45■□□□□ 0.86
ABCF3-212ENST00000478288 VWDEQ8N2E2 1590 aa20.44■□□□□ 0.86
ABCF3-212ENST00000478288 IQGAP1P46940 1657 aa20.44■□□□□ 0.86
ABCF3-212ENST00000478288 KIF15Q9NS87 1388 aa20.44■□□□□ 0.86
ABCF3-212ENST00000478288 ABCC5O15440 1437 aa20.44■□□□□ 0.86
ABCF3-212ENST00000478288 ARHGAP31Q2M1Z3 1444 aa20.44■□□□□ 0.86
ABCF3-212ENST00000478288 UBAP1LF5GYI3 381 aa20.43■□□□□ 0.86
ABCF3-212ENST00000478288 CFAP65Q6ZU64 1925 aaKnown RBP20.42■□□□□ 0.86
ABCF3-212ENST00000478288 NPHP4O75161 1426 aaPredicted RBP20.42■□□□□ 0.86
ABCF3-212ENST00000478288 APLP2Q06481 763 aa20.41■□□□□ 0.86
ABCF3-212ENST00000478288 FGD6Q6ZV73 1430 aa20.41■□□□□ 0.86
ABCF3-212ENST00000478288 UBR1Q8IWV7 1749 aa20.41■□□□□ 0.86
ABCF3-212ENST00000478288 DAPK1P53355 1430 aa20.4■□□□□ 0.86
ABCF3-212ENST00000478288 SYNMO15061 1565 aa20.35■□□□□ 0.85
ABCF3-212ENST00000478288 SLIT1O75093 1534 aa20.35■□□□□ 0.85
ABCF3-212ENST00000478288 LMTK2Q8IWU2 1503 aa20.35■□□□□ 0.85
ABCF3-212ENST00000478288 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
ABCF3-212ENST00000478288 KDM5AP29375 1690 aaKnown RBP20.34■□□□□ 0.85
ABCF3-212ENST00000478288 ANKRD30AQ9BXX3 1397 aa20.33■□□□□ 0.84
ABCF3-212ENST00000478288 SCAF11Q99590 1463 aaKnown RBP20.32■□□□□ 0.84
ABCF3-212ENST00000478288 TOM1O60784 492 aa20.32■□□□□ 0.84
ABCF3-212ENST00000478288 ILDR2Q71H61 639 aa20.32■□□□□ 0.84
ABCF3-212ENST00000478288 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
ABCF3-212ENST00000478288 STRCP1A6NGW2 1772 aa20.31■□□□□ 0.84
ABCF3-212ENST00000478288 KANK1Q14678 1352 aa20.31■□□□□ 0.84
ABCF3-212ENST00000478288 ADGRL2O95490 1459 aa20.3■□□□□ 0.84
ABCF3-212ENST00000478288 ALKQ9UM73 1620 aa20.28■□□□□ 0.84
ABCF3-212ENST00000478288 PIK3C2BO00750 1634 aa20.27■□□□□ 0.84
ABCF3-212ENST00000478288 SOCS7O14512 581 aa20.27■□□□□ 0.84
ABCF3-212ENST00000478288 LRRC7Q96NW7 1537 aa20.27■□□□□ 0.83
ABCF3-212ENST00000478288 EFCAB6Q5THR3 1501 aa20.26■□□□□ 0.83
ABCF3-212ENST00000478288 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
ABCF3-212ENST00000478288 NOS1P29475 1434 aa20.22■□□□□ 0.83
ABCF3-212ENST00000478288 LTKP29376 864 aa20.22■□□□□ 0.83
ABCF3-212ENST00000478288 HSPA1LP34931 641 aa20.22■□□□□ 0.83
ABCF3-212ENST00000478288 PIP4K2BP78356 416 aa20.22■□□□□ 0.83
ABCF3-212ENST00000478288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.83
ABCF3-212ENST00000478288 TXNDC2Q86VQ3 553 aa20.21■□□□□ 0.83
ABCF3-212ENST00000478288 EID1Q9Y6B2 187 aa20.21■□□□□ 0.83
ABCF3-212ENST00000478288 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
ABCF3-212ENST00000478288 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
ABCF3-212ENST00000478288 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
ABCF3-212ENST00000478288 MED1Q15648 1581 aaPredicted RBP20.19■□□□□ 0.82
ABCF3-212ENST00000478288 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
ABCF3-212ENST00000478288 ADGRB3O60242 1522 aa20.18■□□□□ 0.82
ABCF3-212ENST00000478288 ANKRD50Q9ULJ7 1429 aa20.18■□□□□ 0.82
ABCF3-212ENST00000478288 TET3O43151 1660 aa20.16■□□□□ 0.82
ABCF3-212ENST00000478288 IDI1Q13907 227 aa20.16■□□□□ 0.82
ABCF3-212ENST00000478288 SLC52A1Q9NWF4 448 aa20.15■□□□□ 0.82
ABCF3-212ENST00000478288 STAG3Q9UJ98 1225 aa20.15■□□□□ 0.82
ABCF3-212ENST00000478288 GCC2Q8IWJ2 1684 aa20.13■□□□□ 0.81
ABCF3-212ENST00000478288 UNC13BO14795 1591 aa20.13■□□□□ 0.81
ABCF3-212ENST00000478288 FAM50AQ14320 339 aaKnown RBP20.12■□□□□ 0.81
ABCF3-212ENST00000478288 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
ABCF3-212ENST00000478288 NWD1Q149M9 1564 aa20.1■□□□□ 0.81
ABCF3-212ENST00000478288 NKTRP30414 1462 aaKnown RBP20.08■□□□□ 0.81
ABCF3-212ENST00000478288 MYO5BQ9ULV0 1848 aa20.08■□□□□ 0.8
ABCF3-212ENST00000478288 TMEM131LA2VDJ0 1609 aa20.06■□□□□ 0.8
ABCF3-212ENST00000478288 ZFYVE9O95405 1425 aa20.06■□□□□ 0.8
ABCF3-212ENST00000478288 KCNA6P17658 529 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms