RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 FAM135AQ9P2D6 1515 aa15.51■□□□□ 0.07
CCM2-210ENST00000478169 UBAP1LF5GYI3 381 aa15.5■□□□□ 0.07
CCM2-210ENST00000478169 CCDC141Q6ZP82 1450 aa15.49■□□□□ 0.07
CCM2-210ENST00000478169 POLR1AO95602 1720 aaPredicted RBP15.48■□□□□ 0.07
CCM2-210ENST00000478169 KIF3BO15066 747 aa15.48■□□□□ 0.07
CCM2-210ENST00000478169 KDM5DQ9BY66 1539 aa15.47■□□□□ 0.07
CCM2-210ENST00000478169 TNRQ92752 1358 aa15.47■□□□□ 0.07
CCM2-210ENST00000478169 PZPP20742 1482 aa15.46■□□□□ 0.07
CCM2-210ENST00000478169 CAMSAP2Q08AD1 1489 aa15.46■□□□□ 0.07
CCM2-210ENST00000478169 NCOA2Q15596 1464 aa15.46■□□□□ 0.07
CCM2-210ENST00000478169 WASHC2CQ9Y4E1 1318 aa15.45■□□□□ 0.06
CCM2-210ENST00000478169 FBXO31Q5XUX0 539 aaPredicted RBP15.45■□□□□ 0.06
CCM2-210ENST00000478169 ARHGEF5Q12774 1597 aa15.44■□□□□ 0.06
CCM2-210ENST00000478169 TSPY4P0CV99 314 aa15.43■□□□□ 0.06
CCM2-210ENST00000478169 TSPY10P0CW01 314 aa15.43■□□□□ 0.06
CCM2-210ENST00000478169 NEURL4Q96JN8 1562 aa15.43■□□□□ 0.06
CCM2-210ENST00000478169 CPS1P31327 1500 aa15.43■□□□□ 0.06
CCM2-210ENST00000478169 THEMISQ8N1K5 641 aaPredicted RBP15.42■□□□□ 0.06
CCM2-210ENST00000478169 MIA2Q96PC5 1412 aa15.42■□□□□ 0.06
CCM2-210ENST00000478169 NLRP1Q9C000 1473 aa15.41■□□□□ 0.06
CCM2-210ENST00000478169 ANKLE2Q86XL3 938 aa15.41■□□□□ 0.06
CCM2-210ENST00000478169 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
CCM2-210ENST00000478169 DEPDC5O75140 1603 aa15.39■□□□□ 0.05
CCM2-210ENST00000478169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCM2-210ENST00000478169 TOM1O60784 492 aa15.39■□□□□ 0.05
CCM2-210ENST00000478169 UGGT1Q9NYU2 1555 aa15.39■□□□□ 0.05
CCM2-210ENST00000478169 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
CCM2-210ENST00000478169 MED14O60244 1454 aa15.38■□□□□ 0.05
CCM2-210ENST00000478169 ZC3H13Q5T200 1668 aaKnown RBP15.38■□□□□ 0.05
CCM2-210ENST00000478169 MAST1Q9Y2H9 1570 aa15.37■□□□□ 0.05
CCM2-210ENST00000478169 CFAP65Q6ZU64 1925 aaKnown RBP15.36■□□□□ 0.05
CCM2-210ENST00000478169 VWDEQ8N2E2 1590 aa15.36■□□□□ 0.05
CCM2-210ENST00000478169 EIF2AK4Q9P2K8 1649 aaKnown RBP15.35■□□□□ 0.05
CCM2-210ENST00000478169 NPHP4O75161 1426 aaPredicted RBP15.35■□□□□ 0.05
CCM2-210ENST00000478169 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
CCM2-210ENST00000478169 HSPA1LP34931 641 aa15.34■□□□□ 0.05
CCM2-210ENST00000478169 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
CCM2-210ENST00000478169 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
CCM2-210ENST00000478169 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
CCM2-210ENST00000478169 IQGAP1P46940 1657 aa15.34■□□□□ 0.05
CCM2-210ENST00000478169 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
CCM2-210ENST00000478169 ABCC3O15438 1527 aa15.33■□□□□ 0.05
CCM2-210ENST00000478169 MAP3K1Q13233 1512 aa15.32■□□□□ 0.04
CCM2-210ENST00000478169 CEP152O94986 1710 aa15.3■□□□□ 0.04
CCM2-210ENST00000478169 ERVK-7P63135 1459 aa15.3■□□□□ 0.04
CCM2-210ENST00000478169 STRCP1A6NGW2 1772 aa15.29■□□□□ 0.04
CCM2-210ENST00000478169 MROH1Q8NDA8 1641 aa15.29■□□□□ 0.04
CCM2-210ENST00000478169 MED1Q15648 1581 aaPredicted RBP15.29■□□□□ 0.04
CCM2-210ENST00000478169 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
CCM2-210ENST00000478169 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
CCM2-210ENST00000478169 UBR1Q8IWV7 1749 aa15.28■□□□□ 0.04
CCM2-210ENST00000478169 ALKQ9UM73 1620 aa15.28■□□□□ 0.04
CCM2-210ENST00000478169 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.04
CCM2-210ENST00000478169 SYNMO15061 1565 aa15.27■□□□□ 0.03
CCM2-210ENST00000478169 LRRC7Q96NW7 1537 aa15.26■□□□□ 0.03
CCM2-210ENST00000478169 ARHGAP31Q2M1Z3 1444 aa15.25■□□□□ 0.03
CCM2-210ENST00000478169 PRDM15P57071 1507 aaPredicted RBP15.23■□□□□ 0.03
CCM2-210ENST00000478169 SCAF11Q99590 1463 aaKnown RBP15.23■□□□□ 0.03
CCM2-210ENST00000478169 LOC105371045A0A1W2PR82 267 aa15.23■□□□□ 0.03
CCM2-210ENST00000478169 SLIT1O75093 1534 aa15.22■□□□□ 0.03
CCM2-210ENST00000478169 CROCC2H7BZ55 1655 aa15.22■□□□□ 0.03
CCM2-210ENST00000478169 ARHGAP23Q9P227 1491 aa15.22■□□□□ 0.03
CCM2-210ENST00000478169 ERBINQ96RT1 1412 aa15.22■□□□□ 0.03
CCM2-210ENST00000478169 KIF15Q9NS87 1388 aa15.22■□□□□ 0.03
CCM2-210ENST00000478169 TXNDC2Q86VQ3 553 aa15.21■□□□□ 0.03
CCM2-210ENST00000478169 LTKP29376 864 aa15.2■□□□□ 0.02
CCM2-210ENST00000478169 ABCC5O15440 1437 aa15.19■□□□□ 0.02
CCM2-210ENST00000478169 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
CCM2-210ENST00000478169 EID1Q9Y6B2 187 aa15.19■□□□□ 0.02
CCM2-210ENST00000478169 XIRP1Q702N8 1843 aaKnown RBP15.18■□□□□ 0.02
CCM2-210ENST00000478169 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
CCM2-210ENST00000478169 KDM5AP29375 1690 aaKnown RBP15.18■□□□□ 0.02
CCM2-210ENST00000478169 KANK1Q14678 1352 aa15.17■□□□□ 0.02
CCM2-210ENST00000478169 PIK3C2BO00750 1634 aa15.17■□□□□ 0.02
CCM2-210ENST00000478169 APLP2Q06481 763 aa15.16■□□□□ 0.02
CCM2-210ENST00000478169 DAPK1P53355 1430 aa15.16■□□□□ 0.02
CCM2-210ENST00000478169 TMEM2Q9UHN6 1383 aa15.15■□□□□ 0.02
CCM2-210ENST00000478169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCM2-210ENST00000478169 LMTK2Q8IWU2 1503 aa15.14■□□□□ 0.01
CCM2-210ENST00000478169 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
CCM2-210ENST00000478169 ANKRD30AQ9BXX3 1397 aa15.13■□□□□ 0.01
CCM2-210ENST00000478169 EFCAB6Q5THR3 1501 aa15.12■□□□□ 0.01
CCM2-210ENST00000478169 FGD6Q6ZV73 1430 aa15.12■□□□□ 0.01
CCM2-210ENST00000478169 IDI1Q13907 227 aa15.12■□□□□ 0.01
CCM2-210ENST00000478169 FAM135BQ49AJ0 1406 aa15.1■□□□□ 0.01
CCM2-210ENST00000478169 TET3O43151 1660 aa15.09■□□□□ 0.01
CCM2-210ENST00000478169 KCNA6P17658 529 aa15.09■□□□□ 0.01
CCM2-210ENST00000478169 NOS1P29475 1434 aa15.09■□□□□ 0.01
CCM2-210ENST00000478169 SLC52A1Q9NWF4 448 aa15.08■□□□□ 0
CCM2-210ENST00000478169 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
CCM2-210ENST00000478169 TMEM94Q12767 1356 aa15.08■□□□□ 0
CCM2-210ENST00000478169 ADGRB3O60242 1522 aa15.06■□□□□ 0
CCM2-210ENST00000478169 PROSER2Q86WR7 435 aaPredicted RBP15.05■□□□□ -0
CCM2-210ENST00000478169 SLC26A8Q96RN1 970 aa15.05■□□□□ -0
CCM2-210ENST00000478169 RGS17Q9UGC6 210 aaPredicted RBP15.05■□□□□ -0
CCM2-210ENST00000478169 ADGRL2O95490 1459 aa15.05■□□□□ -0
CCM2-210ENST00000478169 ROBO1Q9Y6N7 1651 aa15.04■□□□□ -0
CCM2-210ENST00000478169 NKTRP30414 1462 aaKnown RBP15.04■□□□□ -0
CCM2-210ENST00000478169 RPRD2Q5VT52 1461 aaKnown RBP15.04■□□□□ -0
CCM2-210ENST00000478169 MYO5BQ9ULV0 1848 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms