RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 ADGRL2O95490 1459 aa34.39■■■■□ 3.1
SF1-214ENST00000477596 ZMYM3Q14202 1370 aa34.39■■■■□ 3.1
SF1-214ENST00000477596 ANKRD30AQ9BXX3 1397 aa34.38■■■■□ 3.09
SF1-214ENST00000477596 PREX1Q8TCU6 1659 aa34.38■■■■□ 3.09
SF1-214ENST00000477596 MROH1Q8NDA8 1641 aa34.38■■■■□ 3.09
SF1-214ENST00000477596 KDM5DQ9BY66 1539 aa34.38■■■■□ 3.09
SF1-214ENST00000477596 NCOA1Q15788 1441 aa34.38■■■■□ 3.09
SF1-214ENST00000477596 ERBINQ96RT1 1412 aa34.36■■■■□ 3.09
SF1-214ENST00000477596 PPP6R1Q9UPN7 881 aa34.35■■■■□ 3.09
SF1-214ENST00000477596 FAM135AQ9P2D6 1515 aa34.32■■■■□ 3.08
SF1-214ENST00000477596 HSPA2P54652 639 aa34.3■■■■□ 3.08
SF1-214ENST00000477596 RRBP1Q9P2E9 1410 aaKnown RBP34.3■■■■□ 3.08
SF1-214ENST00000477596 ABCC3O15438 1527 aa34.29■■■■□ 3.08
SF1-214ENST00000477596 WASHC2CQ9Y4E1 1318 aa34.28■■■■□ 3.08
SF1-214ENST00000477596 SETD1BQ9UPS6 1966 aaKnown RBP34.27■■■■□ 3.08
SF1-214ENST00000477596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.27■■■■□ 3.08
SF1-214ENST00000477596 ITGAEP38570 1179 aa34.27■■■■□ 3.08
SF1-214ENST00000477596 NPATQ14207 1427 aa34.27■■■■□ 3.08
SF1-214ENST00000477596 UHRF1BP1Q6BDS2 1440 aa34.27■■■■□ 3.08
SF1-214ENST00000477596 CEP152O94986 1710 aa34.26■■■■□ 3.07
SF1-214ENST00000477596 PRDM15P57071 1507 aaPredicted RBP34.25■■■■□ 3.07
SF1-214ENST00000477596 DEPDC5O75140 1603 aa34.25■■■■□ 3.07
SF1-214ENST00000477596 ZC3H13Q5T200 1668 aaKnown RBP34.25■■■■□ 3.07
SF1-214ENST00000477596 PZPP20742 1482 aa34.2■■■■□ 3.07
SF1-214ENST00000477596 MYO3AQ8NEV4 1616 aa34.2■■■■□ 3.07
SF1-214ENST00000477596 ANKRD50Q9ULJ7 1429 aa34.18■■■■□ 3.06
SF1-214ENST00000477596 ROCK1Q13464 1354 aa34.17■■■■□ 3.06
SF1-214ENST00000477596 CAMSAP1Q5T5Y3 1602 aa34.17■■■■□ 3.06
SF1-214ENST00000477596 FBXO31Q5XUX0 539 aaPredicted RBP34.16■■■■□ 3.06
SF1-214ENST00000477596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.16■■■■□ 3.06
SF1-214ENST00000477596 ZNF142P52746 1687 aaPredicted RBP34.11■■■■□ 3.05
SF1-214ENST00000477596 VWDEQ8N2E2 1590 aa34.11■■■■□ 3.05
SF1-214ENST00000477596 TNRQ92752 1358 aa34.09■■■■□ 3.05
SF1-214ENST00000477596 CEP170BQ9Y4F5 1589 aaPredicted RBP34.08■■■■□ 3.05
SF1-214ENST00000477596 KANK1Q14678 1352 aa34.06■■■■□ 3.04
SF1-214ENST00000477596 ERVK-7P63135 1459 aa34.04■■■■□ 3.04
SF1-214ENST00000477596 UNC13BO14795 1591 aa34.03■■■■□ 3.04
SF1-214ENST00000477596 SPATA31D1Q6ZQQ2 1576 aa34.03■■■■□ 3.04
SF1-214ENST00000477596 LMTK2Q8IWU2 1503 aa34.03■■■■□ 3.04
SF1-214ENST00000477596 STRCQ7RTU9 1775 aa34.03■■■■□ 3.04
SF1-214ENST00000477596 CFAP65Q6ZU64 1925 aaKnown RBP34.02■■■■□ 3.04
SF1-214ENST00000477596 A2ML1A8K2U0 1454 aa34■■■■□ 3.03
SF1-214ENST00000477596 ARHGAP31Q2M1Z3 1444 aa33.99■■■■□ 3.03
SF1-214ENST00000477596 EFCAB6Q5THR3 1501 aa33.97■■■■□ 3.03
SF1-214ENST00000477596 GCC2Q8IWJ2 1684 aa33.93■■■■□ 3.02
SF1-214ENST00000477596 NLRP1Q9C000 1473 aa33.92■■■■□ 3.02
SF1-214ENST00000477596 NAIPQ13075 1403 aa33.91■■■■□ 3.02
SF1-214ENST00000477596 TET3O43151 1660 aa33.9■■■■□ 3.02
SF1-214ENST00000477596 IQGAP3Q86VI3 1631 aa33.88■■■■□ 3.01
SF1-214ENST00000477596 PLA2R1Q13018 1463 aa33.86■■■■□ 3.01
SF1-214ENST00000477596 UGGT1Q9NYU2 1555 aa33.85■■■■□ 3.01
SF1-214ENST00000477596 HFM1A2PYH4 1435 aa33.84■■■■□ 3.01
SF1-214ENST00000477596 SYNMO15061 1565 aa33.84■■■■□ 3.01
SF1-214ENST00000477596 NUP155O75694 1391 aa33.82■■■■□ 3
SF1-214ENST00000477596 NCKAP5LQ9HCH0 1330 aa33.81■■■■□ 3
SF1-214ENST00000477596 E9PCH4 1651 aa33.8■■■■□ 3
SF1-214ENST00000477596 NOS1P29475 1434 aa33.79■■■■□ 3
SF1-214ENST00000477596 UBR1Q8IWV7 1749 aa33.78■■■■□ 3
SF1-214ENST00000477596 RPRD2Q5VT52 1461 aaKnown RBP33.77■■■■□ 3
SF1-214ENST00000477596 PIK3C2BO00750 1634 aa33.77■■■■□ 3
SF1-214ENST00000477596 PTPRTO14522 1441 aa33.75■■■□□ 2.99
SF1-214ENST00000477596 POLR1AO95602 1720 aaPredicted RBP33.74■■■□□ 2.99
SF1-214ENST00000477596 NEURL4Q96JN8 1562 aa33.72■■■□□ 2.99
SF1-214ENST00000477596 DMRT2Q9Y5R5 561 aa33.72■■■□□ 2.99
SF1-214ENST00000477596 THEMISQ8N1K5 641 aaPredicted RBP33.7■■■□□ 2.99
SF1-214ENST00000477596 PKD2Q13563 968 aa33.69■■■□□ 2.98
SF1-214ENST00000477596 IDI1Q13907 227 aa33.66■■■□□ 2.98
SF1-214ENST00000477596 ADGRB3O60242 1522 aa33.63■■■□□ 2.97
SF1-214ENST00000477596 ANKLE2Q86XL3 938 aa33.6■■■□□ 2.97
SF1-214ENST00000477596 KDM5AP29375 1690 aaKnown RBP33.6■■■□□ 2.97
SF1-214ENST00000477596 ARHGAP23Q9P227 1491 aa33.59■■■□□ 2.97
SF1-214ENST00000477596 TRIM52Q96A61 297 aa33.59■■■□□ 2.97
SF1-214ENST00000477596 SLIT1O75093 1534 aa33.58■■■□□ 2.97
SF1-214ENST00000477596 SLC52A1Q9NWF4 448 aa33.57■■■□□ 2.96
SF1-214ENST00000477596 SPHKAPQ2M3C7 1700 aa33.56■■■□□ 2.96
SF1-214ENST00000477596 STAG3Q9UJ98 1225 aa33.56■■■□□ 2.96
SF1-214ENST00000477596 MYO5BQ9ULV0 1848 aa33.56■■■□□ 2.96
SF1-214ENST00000477596 MED14O60244 1454 aa33.55■■■□□ 2.96
SF1-214ENST00000477596 NPHP4O75161 1426 aaPredicted RBP33.54■■■□□ 2.96
SF1-214ENST00000477596 SCAF11Q99590 1463 aaKnown RBP33.54■■■□□ 2.96
SF1-214ENST00000477596 IQGAP1P46940 1657 aa33.54■■■□□ 2.96
SF1-214ENST00000477596 TMEM2Q9UHN6 1383 aa33.52■■■□□ 2.96
SF1-214ENST00000477596 LTBP4Q8N2S1 1624 aa33.52■■■□□ 2.96
SF1-214ENST00000477596 TMEM131LA2VDJ0 1609 aa33.51■■■□□ 2.96
SF1-214ENST00000477596 LTKP29376 864 aa33.51■■■□□ 2.95
SF1-214ENST00000477596 ZNF335Q9H4Z2 1342 aaPredicted RBP33.51■■■□□ 2.95
SF1-214ENST00000477596 SETD5Q9C0A6 1442 aa33.49■■■□□ 2.95
SF1-214ENST00000477596 TXNDC2Q86VQ3 553 aa33.46■■■□□ 2.95
SF1-214ENST00000477596 CERKQ8TCT0 537 aa33.45■■■□□ 2.95
SF1-214ENST00000477596 SLC4A1APQ9BWU0 796 aaKnown RBP33.45■■■□□ 2.95
SF1-214ENST00000477596 TRPM2O94759 1503 aa33.43■■■□□ 2.94
SF1-214ENST00000477596 CLTCL1P53675 1640 aa33.43■■■□□ 2.94
SF1-214ENST00000477596 CHGAP10645 457 aaKnown RBP33.43■■■□□ 2.94
SF1-214ENST00000477596 RAB3GAP2Q9H2M9 1393 aa33.42■■■□□ 2.94
SF1-214ENST00000477596 EID1Q9Y6B2 187 aa33.41■■■□□ 2.94
SF1-214ENST00000477596 ZFYVE9O95405 1425 aa33.4■■■□□ 2.94
SF1-214ENST00000477596 ILDR1Q86SU0 546 aaPredicted RBP33.38■■■□□ 2.93
SF1-214ENST00000477596 RIMS2Q9UQ26 1411 aa33.37■■■□□ 2.93
SF1-214ENST00000477596 FOXD1Q16676 465 aa33.37■■■□□ 2.93
SF1-214ENST00000477596 MPHOSPH9Q99550 1183 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms