RNA–Protein interactions for RNA: ENST00000477149.5

RAB17-210, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB17, Length 3,211 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-210ENST00000477149 SKAP1Q86WV1 359 aa17.68■□□□□ 0.42
RAB17-210ENST00000477149 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
RAB17-210ENST00000477149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.68■□□□□ 0.421e-13■□□□□ 11.1
RAB17-210ENST00000477149 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
RAB17-210ENST00000477149 HSP90AA1P07900 732 aaKnown RBP17.66■□□□□ 0.42
RAB17-210ENST00000477149 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
RAB17-210ENST00000477149 ARID4BQ4LE39 1312 aaPredicted RBP17.65■□□□□ 0.42
RAB17-210ENST00000477149 ROCK1Q13464 1354 aa17.65■□□□□ 0.42
RAB17-210ENST00000477149 NUP155O75694 1391 aa17.65■□□□□ 0.42
RAB17-210ENST00000477149 ANKRD30BQ9BXX2 1392 aa17.65■□□□□ 0.42
RAB17-210ENST00000477149 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
RAB17-210ENST00000477149 ANKRD30AQ9BXX3 1397 aa17.64■□□□□ 0.41
RAB17-210ENST00000477149 ERCC6L2Q5T890 1561 aa17.63■□□□□ 0.41
RAB17-210ENST00000477149 CNTLNQ9NXG0 1405 aa17.63■□□□□ 0.41
RAB17-210ENST00000477149 DNMT1P26358 1616 aaKnown RBP17.63■□□□□ 0.41
RAB17-210ENST00000477149 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
RAB17-210ENST00000477149 MS4A1P11836 297 aa17.62■□□□□ 0.41
RAB17-210ENST00000477149 TMC1Q8TDI8 760 aa17.62■□□□□ 0.41
RAB17-210ENST00000477149 ANKRD50Q9ULJ7 1429 aa17.62■□□□□ 0.41
RAB17-210ENST00000477149 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
RAB17-210ENST00000477149 ABCA8O94911 1581 aa17.6■□□□□ 0.41
RAB17-210ENST00000477149 RRAGDQ9NQL2 400 aaPredicted RBP17.6■□□□□ 0.41
RAB17-210ENST00000477149 RRP1P56182 461 aaKnown RBP17.59■□□□□ 0.41
RAB17-210ENST00000477149 C9orf84Q5VXU9 1444 aa17.59■□□□□ 0.41
RAB17-210ENST00000477149 RGL3Q3MIN7 710 aa17.57■□□□□ 0.4
RAB17-210ENST00000477149 KIF15Q9NS87 1388 aa17.57■□□□□ 0.4
RAB17-210ENST00000477149 CHD1O14646 1710 aa17.57■□□□□ 0.4
RAB17-210ENST00000477149 A0A0U1RQG5 324 aaPredicted RBP17.56■□□□□ 0.4
RAB17-210ENST00000477149 PZPP20742 1482 aa17.56■□□□□ 0.4
RAB17-210ENST00000477149 ABCC10Q5T3U5 1492 aa17.56■□□□□ 0.4
RAB17-210ENST00000477149 RCAN3Q9UKA8 241 aa17.55■□□□□ 0.4
RAB17-210ENST00000477149 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
RAB17-210ENST00000477149 CCDC7Q96M83 1385 aa17.54■□□□□ 0.4
RAB17-210ENST00000477149 RPRD2Q5VT52 1461 aaKnown RBP17.53■□□□□ 0.4
RAB17-210ENST00000477149 POGKQ9P215 609 aa17.53■□□□□ 0.4
RAB17-210ENST00000477149 PLIN1O60240 522 aa17.52■□□□□ 0.4
RAB17-210ENST00000477149 RRP9O43818 475 aaKnown RBP17.51■□□□□ 0.39
RAB17-210ENST00000477149 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
RAB17-210ENST00000477149 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
RAB17-210ENST00000477149 KIAA1107Q9UPP5 1409 aa17.5■□□□□ 0.39
RAB17-210ENST00000477149 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
RAB17-210ENST00000477149 CDC42BPAQ5VT25 1732 aa17.48■□□□□ 0.39
RAB17-210ENST00000477149 RGS3P49796 1198 aa17.48■□□□□ 0.39
RAB17-210ENST00000477149 SLKQ9H2G2 1235 aaPredicted RBP17.47■□□□□ 0.39
RAB17-210ENST00000477149 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
RAB17-210ENST00000477149 AFAP1Q8N556 730 aa17.46■□□□□ 0.39
RAB17-210ENST00000477149 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.39
RAB17-210ENST00000477149 MBD5Q9P267 1494 aa17.45■□□□□ 0.38
RAB17-210ENST00000477149 GZF1Q9H116 711 aaPredicted RBP17.45■□□□□ 0.38
RAB17-210ENST00000477149 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
RAB17-210ENST00000477149 ADCY10Q96PN6 1610 aa17.44■□□□□ 0.38
RAB17-210ENST00000477149 SYCP2Q9BX26 1530 aa17.44■□□□□ 0.38
RAB17-210ENST00000477149 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
RAB17-210ENST00000477149 CRBNQ96SW2 442 aa17.43■□□□□ 0.38
RAB17-210ENST00000477149 TTC37Q6PGP7 1564 aa17.41■□□□□ 0.38
RAB17-210ENST00000477149 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
RAB17-210ENST00000477149 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
RAB17-210ENST00000477149 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
RAB17-210ENST00000477149 USP47Q96K76 1375 aa17.4■□□□□ 0.38
RAB17-210ENST00000477149 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
RAB17-210ENST00000477149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.39■□□□□ 0.37
RAB17-210ENST00000477149 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
RAB17-210ENST00000477149 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
RAB17-210ENST00000477149 GOLGA6L3A6NEY3 463 aa17.38■□□□□ 0.37
RAB17-210ENST00000477149 ABCC2Q92887 1545 aa17.38■□□□□ 0.37
RAB17-210ENST00000477149 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
RAB17-210ENST00000477149 RSPH4AQ5TD94 716 aa17.36■□□□□ 0.37
RAB17-210ENST00000477149 ADGBQ8N7X0 1667 aa17.36■□□□□ 0.37
RAB17-210ENST00000477149 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
RAB17-210ENST00000477149 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
RAB17-210ENST00000477149 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
RAB17-210ENST00000477149 ARHGEF12Q9NZN5 1544 aa17.34■□□□□ 0.37
RAB17-210ENST00000477149 CROCC2H7BZ55 1655 aa17.34■□□□□ 0.37
RAB17-210ENST00000477149 PANK2Q9BZ23 570 aa17.34■□□□□ 0.37
RAB17-210ENST00000477149 SHANK2Q9UPX8 1470 aa17.33■□□□□ 0.37
RAB17-210ENST00000477149 TRAPPC8Q9Y2L5 1435 aa17.33■□□□□ 0.37
RAB17-210ENST00000477149 SPATA31E1Q6ZUB1 1445 aa17.33■□□□□ 0.36
RAB17-210ENST00000477149 CLCN1P35523 988 aa17.33■□□□□ 0.36
RAB17-210ENST00000477149 SPRYD3Q8NCJ5 442 aa17.33■□□□□ 0.36
RAB17-210ENST00000477149 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
RAB17-210ENST00000477149 BECN1Q14457 450 aa17.32■□□□□ 0.36
RAB17-210ENST00000477149 RBM10P98175 930 aaKnown RBP17.32■□□□□ 0.36
RAB17-210ENST00000477149 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
RAB17-210ENST00000477149 TRIM44Q96DX7 344 aaPredicted RBP17.31■□□□□ 0.36
RAB17-210ENST00000477149 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
RAB17-210ENST00000477149 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
RAB17-210ENST00000477149 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
RAB17-210ENST00000477149 DHX29Q7Z478 1369 aaKnown RBP17.3■□□□□ 0.36
RAB17-210ENST00000477149 PREX2Q70Z35 1606 aa17.3■□□□□ 0.36
RAB17-210ENST00000477149 ARID3AQ99856 593 aa17.29■□□□□ 0.36
RAB17-210ENST00000477149 FAM135AQ9P2D6 1515 aa17.29■□□□□ 0.36
RAB17-210ENST00000477149 PLCH2O75038 1416 aa17.28■□□□□ 0.36
RAB17-210ENST00000477149 KIF3BO15066 747 aa17.27■□□□□ 0.36
RAB17-210ENST00000477149 C8orf34Q49A92 452 aa17.26■□□□□ 0.35
RAB17-210ENST00000477149 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
RAB17-210ENST00000477149 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
RAB17-210ENST00000477149 CENPQQ7L2Z9 268 aaPredicted RBP17.26■□□□□ 0.35
RAB17-210ENST00000477149 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
RAB17-210ENST00000477149 ARHGEF5Q12774 1597 aa17.26■□□□□ 0.35
RAB17-210ENST00000477149 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms