RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 ATP10AO60312 1499 aa16.11■□□□□ 0.17
NUP188-205ENST00000477069 TRPM1Q7Z4N2 1603 aa16.1■□□□□ 0.17
NUP188-205ENST00000477069 USP47Q96K76 1375 aa16.08■□□□□ 0.17
NUP188-205ENST00000477069 KIF7Q2M1P5 1343 aa16.08■□□□□ 0.16
NUP188-205ENST00000477069 FANCAO15360 1455 aa16.08■□□□□ 0.16
NUP188-205ENST00000477069 ASXL2Q76L83 1435 aa16.08■□□□□ 0.16
NUP188-205ENST00000477069 E9PCH4 1651 aa16.07■□□□□ 0.16
NUP188-205ENST00000477069 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
NUP188-205ENST00000477069 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
NUP188-205ENST00000477069 LAMC1P11047 1609 aa16.05■□□□□ 0.16
NUP188-205ENST00000477069 EIF2AK4Q9P2K8 1649 aaKnown RBP16.05■□□□□ 0.16
NUP188-205ENST00000477069 VWDEQ8N2E2 1590 aa16.04■□□□□ 0.16
NUP188-205ENST00000477069 A2MP01023 1474 aa16.04■□□□□ 0.16
NUP188-205ENST00000477069 PRAG1Q86YV5 1406 aa16.03■□□□□ 0.16
NUP188-205ENST00000477069 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
NUP188-205ENST00000477069 TET3O43151 1660 aa16.02■□□□□ 0.15
NUP188-205ENST00000477069 OSCARQ8IYS5 282 aa16.02■□□□□ 0.15
NUP188-205ENST00000477069 SPHKAPQ2M3C7 1700 aa16.02■□□□□ 0.15
NUP188-205ENST00000477069 ADGRL1O94910 1474 aa16.02■□□□□ 0.15
NUP188-205ENST00000477069 MROH1Q8NDA8 1641 aa16.01■□□□□ 0.15
NUP188-205ENST00000477069 CEP152O94986 1710 aa16.01■□□□□ 0.15
NUP188-205ENST00000477069 ARID4BQ4LE39 1312 aaPredicted RBP16.01■□□□□ 0.15
NUP188-205ENST00000477069 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
NUP188-205ENST00000477069 AFAP1Q8N556 730 aa16.01■□□□□ 0.15
NUP188-205ENST00000477069 KIDINS220Q9ULH0 1771 aa16■□□□□ 0.15
NUP188-205ENST00000477069 TRPM2O94759 1503 aa16■□□□□ 0.15
NUP188-205ENST00000477069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■■■□ 21.9
NUP188-205ENST00000477069 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
NUP188-205ENST00000477069 DCAF11Q8TEB1 546 aa15.99■□□□□ 0.15
NUP188-205ENST00000477069 PRDM15P57071 1507 aaPredicted RBP15.99■□□□□ 0.15
NUP188-205ENST00000477069 RNF17Q9BXT8 1623 aaKnown RBP15.99■□□□□ 0.15
NUP188-205ENST00000477069 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
NUP188-205ENST00000477069 PRKRIP1Q9H875 184 aaPredicted RBP15.98■□□□□ 0.15
NUP188-205ENST00000477069 SCAPERQ9BY12 1400 aa15.98■□□□□ 0.15
NUP188-205ENST00000477069 GPRASP1Q5JY77 1395 aa15.97■□□□□ 0.15
NUP188-205ENST00000477069 PTPRTO14522 1441 aa15.96■□□□□ 0.15
NUP188-205ENST00000477069 CARD11Q9BXL7 1154 aa15.96■□□□□ 0.15
NUP188-205ENST00000477069 CLTCL1P53675 1640 aa15.95■□□□□ 0.14
NUP188-205ENST00000477069 KDM2AQ9Y2K7 1162 aa15.95■□□□□ 0.14
NUP188-205ENST00000477069 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
NUP188-205ENST00000477069 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
NUP188-205ENST00000477069 SUPT16HQ9Y5B9 1047 aaKnown RBP15.94■□□□□ 0.14
NUP188-205ENST00000477069 NEURL4Q96JN8 1562 aa15.94■□□□□ 0.14
NUP188-205ENST00000477069 ZNF518AQ6AHZ1 1483 aa15.93■□□□□ 0.14
NUP188-205ENST00000477069 CCDC184Q52MB2 194 aa15.92■□□□□ 0.14
NUP188-205ENST00000477069 ST20-MTHFSA0A0A6YYL1 179 aa15.9■□□□□ 0.14
NUP188-205ENST00000477069 EFCAB6Q5THR3 1501 aa15.89■□□□□ 0.13
NUP188-205ENST00000477069 POGZQ7Z3K3 1410 aa15.89■□□□□ 0.13
NUP188-205ENST00000477069 IQGAP1P46940 1657 aa15.89■□□□□ 0.13
NUP188-205ENST00000477069 FRMPD1Q5SYB0 1578 aa15.89■□□□□ 0.13
NUP188-205ENST00000477069 LMTK2Q8IWU2 1503 aa15.89■□□□□ 0.13
NUP188-205ENST00000477069 PPRC1Q5VV67 1664 aaKnown RBP15.89■□□□□ 0.13
NUP188-205ENST00000477069 HECW2Q9P2P5 1572 aa15.89■□□□□ 0.13
NUP188-205ENST00000477069 CD109Q6YHK3 1445 aa15.89■□□□□ 0.13
NUP188-205ENST00000477069 RGL3Q3MIN7 710 aa15.88■□□□□ 0.13
NUP188-205ENST00000477069 MLH3Q9UHC1 1453 aa15.87■□□□□ 0.13
NUP188-205ENST00000477069 IFT172Q9UG01 1749 aa15.87■□□□□ 0.13
NUP188-205ENST00000477069 NBPF1Q3BBV0 1214 aa15.87■□□□□ 0.13
NUP188-205ENST00000477069 COL17A1Q9UMD9 1497 aaPredicted RBP15.86■□□□□ 0.13
NUP188-205ENST00000477069 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
NUP188-205ENST00000477069 KANK1Q14678 1352 aa15.86■□□□□ 0.13
NUP188-205ENST00000477069 ABCA6Q8N139 1617 aa15.86■□□□□ 0.13
NUP188-205ENST00000477069 KIAA1210Q9ULL0 1709 aa15.86■□□□□ 0.13
NUP188-205ENST00000477069 MAP3K4Q9Y6R4 1608 aa15.85■□□□□ 0.13
NUP188-205ENST00000477069 NEO1Q92859 1461 aa15.84■□□□□ 0.13
NUP188-205ENST00000477069 KIF1BO60333 1816 aa15.84■□□□□ 0.13
NUP188-205ENST00000477069 KIF3BO15066 747 aa15.83■□□□□ 0.12
NUP188-205ENST00000477069 MROH2AA6NES4 1674 aa15.83■□□□□ 0.12
NUP188-205ENST00000477069 HNRNPUQ00839 825 aaKnown RBP eCLIP15.82■□□□□ 0.12
NUP188-205ENST00000477069 MRS2Q9HD23 443 aa15.82■□□□□ 0.12
NUP188-205ENST00000477069 RICTORQ6R327 1708 aa15.82■□□□□ 0.12
NUP188-205ENST00000477069 UGGT1Q9NYU2 1555 aa15.81■□□□□ 0.12
NUP188-205ENST00000477069 TESK2Q96S53 571 aa15.81■□□□□ 0.12
NUP188-205ENST00000477069 MYOM2P54296 1465 aa15.79■□□□□ 0.12
NUP188-205ENST00000477069 STAC3Q96MF2 364 aa15.79■□□□□ 0.12
NUP188-205ENST00000477069 POLR3GLQ9BT43 218 aa15.79■□□□□ 0.12
NUP188-205ENST00000477069 GLI2P10070 1586 aa15.79■□□□□ 0.12
NUP188-205ENST00000477069 DISP3Q9P2K9 1392 aa15.78■□□□□ 0.12
NUP188-205ENST00000477069 KTN1Q86UP2 1357 aaKnown RBP15.78■□□□□ 0.12
NUP188-205ENST00000477069 DIP2CQ9Y2E4 1556 aa15.78■□□□□ 0.12
NUP188-205ENST00000477069 ADGRB3O60242 1522 aa15.77■□□□□ 0.11
NUP188-205ENST00000477069 RIMBP3CA6NJZ7 1639 aa15.76■□□□□ 0.11
NUP188-205ENST00000477069 RIMBP3BA6NNM3 1639 aa15.76■□□□□ 0.11
NUP188-205ENST00000477069 RIMBP3Q9UFD9 1639 aa15.76■□□□□ 0.11
NUP188-205ENST00000477069 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
NUP188-205ENST00000477069 CAMSAP1Q5T5Y3 1602 aa15.75■□□□□ 0.11
NUP188-205ENST00000477069 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
NUP188-205ENST00000477069 NRXN1Q9ULB1 1477 aa15.75■□□□□ 0.11
NUP188-205ENST00000477069 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
NUP188-205ENST00000477069 ABCC3O15438 1527 aa15.75■□□□□ 0.11
NUP188-205ENST00000477069 SCAF11Q99590 1463 aaKnown RBP15.74■□□□□ 0.11
NUP188-205ENST00000477069 SIGLEC1Q9BZZ2 1709 aa15.74■□□□□ 0.11
NUP188-205ENST00000477069 PPLO60437 1756 aa15.73■□□□□ 0.11
NUP188-205ENST00000477069 FKBP8Q14318 412 aa15.73■□□□□ 0.11
NUP188-205ENST00000477069 NPATQ14207 1427 aa15.73■□□□□ 0.11
NUP188-205ENST00000477069 PARD3Q8TEW0 1356 aa15.72■□□□□ 0.11
NUP188-205ENST00000477069 MYT1Q01538 1121 aa15.72■□□□□ 0.11
NUP188-205ENST00000477069 MYOM1P52179 1685 aa15.72■□□□□ 0.11
NUP188-205ENST00000477069 ZC3H13Q5T200 1668 aaKnown RBP15.72■□□□□ 0.11
NUP188-205ENST00000477069 PER1O15534 1290 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms