RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ZNF335Q9H4Z2 1342 aaPredicted RBP18.45■□□□□ 0.54
VARS2-208ENST00000477052 WASHC2CQ9Y4E1 1318 aa18.45■□□□□ 0.54
VARS2-208ENST00000477052 KDM5DQ9BY66 1539 aa18.42■□□□□ 0.54
VARS2-208ENST00000477052 TNRQ92752 1358 aa18.42■□□□□ 0.54
VARS2-208ENST00000477052 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
VARS2-208ENST00000477052 A2ML1A8K2U0 1454 aa18.4■□□□□ 0.54
VARS2-208ENST00000477052 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
VARS2-208ENST00000477052 TCOF1Q13428 1488 aaKnown RBP18.39■□□□□ 0.54
VARS2-208ENST00000477052 PKD2Q13563 968 aa18.39■□□□□ 0.53
VARS2-208ENST00000477052 PZPP20742 1482 aa18.39■□□□□ 0.53
VARS2-208ENST00000477052 PLA2R1Q13018 1463 aa18.39■□□□□ 0.53
VARS2-208ENST00000477052 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
VARS2-208ENST00000477052 MAST1Q9Y2H9 1570 aa18.35■□□□□ 0.53
VARS2-208ENST00000477052 MIA2Q96PC5 1412 aa18.34■□□□□ 0.53
VARS2-208ENST00000477052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.34■□□□□ 0.53
VARS2-208ENST00000477052 APLP2Q06481 763 aa18.33■□□□□ 0.52
VARS2-208ENST00000477052 ABCC3O15438 1527 aa18.33■□□□□ 0.52
VARS2-208ENST00000477052 RNF17Q9BXT8 1623 aaKnown RBP18.32■□□□□ 0.52
VARS2-208ENST00000477052 RRP7BPQ9NSQ0 103 aa18.32■□□□□ 0.52
VARS2-208ENST00000477052 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
VARS2-208ENST00000477052 NEURL4Q96JN8 1562 aa18.31■□□□□ 0.52
VARS2-208ENST00000477052 UBAP1LF5GYI3 381 aa18.31■□□□□ 0.52
VARS2-208ENST00000477052 ABCC5O15440 1437 aa18.31■□□□□ 0.52
VARS2-208ENST00000477052 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
VARS2-208ENST00000477052 PTPN23Q9H3S7 1636 aa18.3■□□□□ 0.52
VARS2-208ENST00000477052 CFAP65Q6ZU64 1925 aaKnown RBP18.29■□□□□ 0.52
VARS2-208ENST00000477052 CEP152O94986 1710 aa18.29■□□□□ 0.52
VARS2-208ENST00000477052 CHIC2Q9UKJ5 165 aa18.29■□□□□ 0.52
VARS2-208ENST00000477052 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
VARS2-208ENST00000477052 KIF15Q9NS87 1388 aa18.29■□□□□ 0.52
VARS2-208ENST00000477052 DISP3Q9P2K9 1392 aa18.29■□□□□ 0.52
VARS2-208ENST00000477052 IQSEC2Q5JU85 1478 aa18.28■□□□□ 0.52
VARS2-208ENST00000477052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.28■□□□□ 0.52
VARS2-208ENST00000477052 UGGT1Q9NYU2 1555 aa18.28■□□□□ 0.52
VARS2-208ENST00000477052 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
VARS2-208ENST00000477052 ANKLE2Q86XL3 938 aa18.27■□□□□ 0.52
VARS2-208ENST00000477052 THEMISQ8N1K5 641 aaPredicted RBP18.27■□□□□ 0.52
VARS2-208ENST00000477052 DUOX2Q9NRD8 1548 aa18.27■□□□□ 0.51
VARS2-208ENST00000477052 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
VARS2-208ENST00000477052 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
VARS2-208ENST00000477052 CROCC2H7BZ55 1655 aa18.25■□□□□ 0.51
VARS2-208ENST00000477052 DAPK1P53355 1430 aa18.25■□□□□ 0.51
VARS2-208ENST00000477052 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
VARS2-208ENST00000477052 ILDR2Q71H61 639 aa18.25■□□□□ 0.51
VARS2-208ENST00000477052 ZC3H13Q5T200 1668 aaKnown RBP18.25■□□□□ 0.51
VARS2-208ENST00000477052 SPATA31D1Q6ZQQ2 1576 aa18.24■□□□□ 0.51
VARS2-208ENST00000477052 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
VARS2-208ENST00000477052 SHANK2Q9UPX8 1470 aa18.22■□□□□ 0.51
VARS2-208ENST00000477052 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
VARS2-208ENST00000477052 PIP4K2BP78356 416 aa18.21■□□□□ 0.51
VARS2-208ENST00000477052 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
VARS2-208ENST00000477052 FAM50AQ14320 339 aaKnown RBP18.19■□□□□ 0.5
VARS2-208ENST00000477052 ERBINQ96RT1 1412 aa18.19■□□□□ 0.5
VARS2-208ENST00000477052 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
VARS2-208ENST00000477052 DEPDC5O75140 1603 aa18.17■□□□□ 0.5
VARS2-208ENST00000477052 MED14O60244 1454 aa18.17■□□□□ 0.5
VARS2-208ENST00000477052 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
VARS2-208ENST00000477052 UBR1Q8IWV7 1749 aa18.16■□□□□ 0.5
VARS2-208ENST00000477052 ANKRD30AQ9BXX3 1397 aa18.16■□□□□ 0.5
VARS2-208ENST00000477052 CPS1P31327 1500 aa18.15■□□□□ 0.5
VARS2-208ENST00000477052 LTKP29376 864 aa18.15■□□□□ 0.5
VARS2-208ENST00000477052 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
VARS2-208ENST00000477052 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.49
VARS2-208ENST00000477052 HSPA1LP34931 641 aa18.13■□□□□ 0.49
VARS2-208ENST00000477052 KANK1Q14678 1352 aa18.13■□□□□ 0.49
VARS2-208ENST00000477052 ARHGAP31Q2M1Z3 1444 aa18.13■□□□□ 0.49
VARS2-208ENST00000477052 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
VARS2-208ENST00000477052 TOM1O60784 492 aa18.11■□□□□ 0.49
VARS2-208ENST00000477052 PPARGC1BQ86YN6 1023 aaKnown RBP18.11■□□□□ 0.49
VARS2-208ENST00000477052 PIK3C2BO00750 1634 aa18.11■□□□□ 0.49
VARS2-208ENST00000477052 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
VARS2-208ENST00000477052 IDI1Q13907 227 aa18.09■□□□□ 0.49
VARS2-208ENST00000477052 STAG3Q9UJ98 1225 aa18.09■□□□□ 0.49
VARS2-208ENST00000477052 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
VARS2-208ENST00000477052 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.48
VARS2-208ENST00000477052 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
VARS2-208ENST00000477052 SLIT1O75093 1534 aa18.07■□□□□ 0.48
VARS2-208ENST00000477052 SYNMO15061 1565 aa18.06■□□□□ 0.48
VARS2-208ENST00000477052 ADGRL2O95490 1459 aa18.06■□□□□ 0.48
VARS2-208ENST00000477052 LMTK2Q8IWU2 1503 aa18.05■□□□□ 0.48
VARS2-208ENST00000477052 EID1Q9Y6B2 187 aa18.05■□□□□ 0.48
VARS2-208ENST00000477052 TMEM2Q9UHN6 1383 aa18.04■□□□□ 0.48
VARS2-208ENST00000477052 ANKRD50Q9ULJ7 1429 aa18.04■□□□□ 0.48
VARS2-208ENST00000477052 EFCAB6Q5THR3 1501 aa18.03■□□□□ 0.48
VARS2-208ENST00000477052 SOCS7O14512 581 aa18.02■□□□□ 0.48
VARS2-208ENST00000477052 ITGAEP38570 1179 aa18.02■□□□□ 0.48
VARS2-208ENST00000477052 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.48
VARS2-208ENST00000477052 NOS1P29475 1434 aa18.01■□□□□ 0.47
VARS2-208ENST00000477052 RBM33Q96EV2 1170 aaKnown RBP18.01■□□□□ 0.47
VARS2-208ENST00000477052 BCANQ96GW7 911 aa17.97■□□□□ 0.47
VARS2-208ENST00000477052 XIRP1Q702N8 1843 aaKnown RBP17.97■□□□□ 0.47
VARS2-208ENST00000477052 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
VARS2-208ENST00000477052 MED1Q15648 1581 aaPredicted RBP17.96■□□□□ 0.47
VARS2-208ENST00000477052 MYO5BQ9ULV0 1848 aa17.94■□□□□ 0.46
VARS2-208ENST00000477052 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
VARS2-208ENST00000477052 SLC52A1Q9NWF4 448 aa17.94■□□□□ 0.46
VARS2-208ENST00000477052 TET3O43151 1660 aa17.93■□□□□ 0.46
VARS2-208ENST00000477052 KDM5AP29375 1690 aaKnown RBP17.93■□□□□ 0.46
VARS2-208ENST00000477052 NUTM2DQ5VT03 806 aaPredicted RBP17.93■□□□□ 0.46
VARS2-208ENST00000477052 TMEM94Q12767 1356 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms