RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 ROCK2O75116 1388 aaKnown RBP28.86■■■□□ 2.21
LIMS2-214ENST00000476932 IQGAP3Q86VI3 1631 aa28.85■■■□□ 2.21
LIMS2-214ENST00000476932 PLA2R1Q13018 1463 aa28.82■■■□□ 2.2
LIMS2-214ENST00000476932 POLR3GLQ9BT43 218 aa28.82■■■□□ 2.2
LIMS2-214ENST00000476932 DCAF11Q8TEB1 546 aa28.81■■■□□ 2.2
LIMS2-214ENST00000476932 KDM2AQ9Y2K7 1162 aa28.81■■■□□ 2.2
LIMS2-214ENST00000476932 PRAG1Q86YV5 1406 aa28.79■■■□□ 2.2
LIMS2-214ENST00000476932 PLEKHH2Q8IVE3 1493 aa28.79■■■□□ 2.2
LIMS2-214ENST00000476932 ERICH6BQ5W0A0 696 aa28.79■■■□□ 2.2
LIMS2-214ENST00000476932 CCDC144AA2RUR9 1427 aa28.78■■■□□ 2.2
LIMS2-214ENST00000476932 ZCCHC11Q5TAX3 1644 aaKnown RBP28.78■■■□□ 2.2
LIMS2-214ENST00000476932 ST20-MTHFSA0A0A6YYL1 179 aa28.77■■■□□ 2.2
LIMS2-214ENST00000476932 MAGI2Q86UL8 1455 aa28.77■■■□□ 2.2
LIMS2-214ENST00000476932 RBM19Q9Y4C8 960 aaKnown RBP28.77■■■□□ 2.2
LIMS2-214ENST00000476932 A2MP01023 1474 aa28.74■■■□□ 2.19
LIMS2-214ENST00000476932 DUOX2Q9NRD8 1548 aa28.74■■■□□ 2.19
LIMS2-214ENST00000476932 LAMC1P11047 1609 aa28.73■■■□□ 2.19
LIMS2-214ENST00000476932 CLASP1Q7Z460 1538 aa28.73■■■□□ 2.19
LIMS2-214ENST00000476932 CNGB1Q14028 1251 aaPredicted RBP28.71■■■□□ 2.19
LIMS2-214ENST00000476932 SMG6Q86US8 1419 aaKnown RBP28.7■■■□□ 2.19
LIMS2-214ENST00000476932 ABCC1P33527 1531 aa28.69■■■□□ 2.18
LIMS2-214ENST00000476932 GPRASP1Q5JY77 1395 aa28.68■■■□□ 2.18
LIMS2-214ENST00000476932 PLCH2O75038 1416 aa28.68■■■□□ 2.18
LIMS2-214ENST00000476932 ERBINQ96RT1 1412 aa28.68■■■□□ 2.18
LIMS2-214ENST00000476932 PPP4R2Q9NY27 417 aa28.68■■■□□ 2.18
LIMS2-214ENST00000476932 ATP10AO60312 1499 aa28.67■■■□□ 2.18
LIMS2-214ENST00000476932 UHRF1BP1LA0JNW5 1464 aa28.67■■■□□ 2.18
LIMS2-214ENST00000476932 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
LIMS2-214ENST00000476932 PNISRQ8TF01 805 aaKnown RBP28.66■■■□□ 2.18
LIMS2-214ENST00000476932 EIF2AK4Q9P2K8 1649 aaKnown RBP28.64■■■□□ 2.17
LIMS2-214ENST00000476932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.63■■■□□ 2.17
LIMS2-214ENST00000476932 KTN1Q86UP2 1357 aaKnown RBP28.62■■■□□ 2.17
LIMS2-214ENST00000476932 LRPPRCP42704 1394 aaKnown RBP28.61■■■□□ 2.17
LIMS2-214ENST00000476932 NBPF1Q3BBV0 1214 aa28.6■■■□□ 2.17
LIMS2-214ENST00000476932 RNF17Q9BXT8 1623 aaKnown RBP28.6■■■□□ 2.17
LIMS2-214ENST00000476932 COL17A1Q9UMD9 1497 aaPredicted RBP28.59■■■□□ 2.17
LIMS2-214ENST00000476932 RGL3Q3MIN7 710 aa28.59■■■□□ 2.17
LIMS2-214ENST00000476932 BRD4O60885 1362 aaPredicted RBP28.59■■■□□ 2.17
LIMS2-214ENST00000476932 TRAPPC8Q9Y2L5 1435 aa28.58■■■□□ 2.17
LIMS2-214ENST00000476932 MYBBP1AQ9BQG0 1328 aaKnown RBP28.58■■■□□ 2.17
LIMS2-214ENST00000476932 NUDCQ9Y266 331 aa28.57■■■□□ 2.16
LIMS2-214ENST00000476932 ANP32EQ9BTT0 268 aa28.57■■■□□ 2.16
LIMS2-214ENST00000476932 TMC1Q8TDI8 760 aa28.56■■■□□ 2.16
LIMS2-214ENST00000476932 RALBP1Q15311 655 aa28.55■■■□□ 2.16
LIMS2-214ENST00000476932 RNF123Q5XPI4 1314 aa28.54■■■□□ 2.16
LIMS2-214ENST00000476932 EFCAB2Q5VUJ9 269 aa28.53■■■□□ 2.16
LIMS2-214ENST00000476932 ARAP3Q8WWN8 1544 aa28.53■■■□□ 2.16
LIMS2-214ENST00000476932 PARD3Q8TEW0 1356 aa28.53■■■□□ 2.16
LIMS2-214ENST00000476932 ZFYVE16Q7Z3T8 1539 aa28.52■■■□□ 2.16
LIMS2-214ENST00000476932 DISP3Q9P2K9 1392 aa28.5■■■□□ 2.15
LIMS2-214ENST00000476932 TESK2Q96S53 571 aa28.5■■■□□ 2.15
LIMS2-214ENST00000476932 B4GALNT3Q6L9W6 998 aa28.49■■■□□ 2.15
LIMS2-214ENST00000476932 DEPDC5O75140 1603 aa28.49■■■□□ 2.15
LIMS2-214ENST00000476932 MADDQ8WXG6 1647 aa28.47■■■□□ 2.15
LIMS2-214ENST00000476932 PER1O15534 1290 aaPredicted RBP28.47■■■□□ 2.15
LIMS2-214ENST00000476932 CEP152O94986 1710 aa28.47■■■□□ 2.15
LIMS2-214ENST00000476932 SPHKAPQ2M3C7 1700 aa28.45■■■□□ 2.15
LIMS2-214ENST00000476932 RTEL1-TNFRSF6BF6WH68 1400 aa28.45■■■□□ 2.14
LIMS2-214ENST00000476932 TRPM2O94759 1503 aa28.45■■■□□ 2.14
LIMS2-214ENST00000476932 SENP3-EIF4A1A0A087X0R7 540 aa28.44■■■□□ 2.14
LIMS2-214ENST00000476932 IQGAP1P46940 1657 aa28.44■■■□□ 2.14
LIMS2-214ENST00000476932 ABCA9Q8IUA7 1624 aa28.42■■■□□ 2.14
LIMS2-214ENST00000476932 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
LIMS2-214ENST00000476932 NLRP13Q86W25 1043 aa28.4■■■□□ 2.14
LIMS2-214ENST00000476932 CLTCL1P53675 1640 aa28.4■■■□□ 2.14
LIMS2-214ENST00000476932 TET3O43151 1660 aa28.39■■■□□ 2.14
LIMS2-214ENST00000476932 FANCIQ9NVI1 1328 aa28.39■■■□□ 2.14
LIMS2-214ENST00000476932 SPAG9O60271 1321 aaKnown RBP28.38■■■□□ 2.13
LIMS2-214ENST00000476932 PTPRTO14522 1441 aa28.37■■■□□ 2.13
LIMS2-214ENST00000476932 MSH5O43196 834 aa28.36■■■□□ 2.13
LIMS2-214ENST00000476932 VWDEQ8N2E2 1590 aa28.36■■■□□ 2.13
LIMS2-214ENST00000476932 WDR7Q9Y4E6 1490 aa28.36■■■□□ 2.13
LIMS2-214ENST00000476932 ATP7AQ04656 1500 aa28.35■■■□□ 2.13
LIMS2-214ENST00000476932 AFAP1Q8N556 730 aa28.35■■■□□ 2.13
LIMS2-214ENST00000476932 WASHC2CQ9Y4E1 1318 aa28.35■■■□□ 2.13
LIMS2-214ENST00000476932 TMF1P82094 1093 aa28.3■■■□□ 2.12
LIMS2-214ENST00000476932 FANCAO15360 1455 aa28.3■■■□□ 2.12
LIMS2-214ENST00000476932 ZMYM4Q5VZL5 1548 aa28.3■■■□□ 2.12
LIMS2-214ENST00000476932 PANK3Q9H999 370 aa28.3■■■□□ 2.12
LIMS2-214ENST00000476932 MROH1Q8NDA8 1641 aa28.28■■■□□ 2.12
LIMS2-214ENST00000476932 BLMP54132 1417 aaPredicted RBP28.27■■■□□ 2.12
LIMS2-214ENST00000476932 INSRP06213 1382 aa28.26■■■□□ 2.11
LIMS2-214ENST00000476932 CC2D1BQ5T0F9 858 aaKnown RBP28.26■■■□□ 2.11
LIMS2-214ENST00000476932 SCAPERQ9BY12 1400 aa28.25■■■□□ 2.11
LIMS2-214ENST00000476932 KIAA1210Q9ULL0 1709 aa28.25■■■□□ 2.11
LIMS2-214ENST00000476932 NEURL4Q96JN8 1562 aa28.24■■■□□ 2.11
LIMS2-214ENST00000476932 MYOM1P52179 1685 aa28.23■■■□□ 2.11
LIMS2-214ENST00000476932 SYNMO15061 1565 aa28.22■■■□□ 2.11
LIMS2-214ENST00000476932 SCAF11Q99590 1463 aaKnown RBP28.22■■■□□ 2.11
LIMS2-214ENST00000476932 ADGRL1O94910 1474 aa28.2■■■□□ 2.11
LIMS2-214ENST00000476932 CCDC136Q96JN2 1154 aa28.19■■■□□ 2.1
LIMS2-214ENST00000476932 PDE3BQ13370 1112 aa28.18■■■□□ 2.1
LIMS2-214ENST00000476932 RRP1P56182 461 aaKnown RBP28.17■■■□□ 2.1
LIMS2-214ENST00000476932 IFT172Q9UG01 1749 aa28.16■■■□□ 2.1
LIMS2-214ENST00000476932 KIDINS220Q9ULH0 1771 aa28.16■■■□□ 2.1
LIMS2-214ENST00000476932 STAC3Q96MF2 364 aa28.16■■■□□ 2.1
LIMS2-214ENST00000476932 KANK1Q14678 1352 aa28.16■■■□□ 2.1
LIMS2-214ENST00000476932 UGGT1Q9NYU2 1555 aa28.15■■■□□ 2.1
LIMS2-214ENST00000476932 SALL2Q9Y467 1007 aaPredicted RBP28.15■■■□□ 2.1
LIMS2-214ENST00000476932 ABCA6Q8N139 1617 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms