RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 DMRTA1Q5VZB9 504 aa12.33□□□□□ -0.44
FNDC3B-208ENST00000476794 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
FNDC3B-208ENST00000476794 PSEN2P49810 448 aa12.31□□□□□ -0.44
FNDC3B-208ENST00000476794 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
FNDC3B-208ENST00000476794 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
FNDC3B-208ENST00000476794 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
FNDC3B-208ENST00000476794 BARGINQ6ZT62 677 aa12.27□□□□□ -0.45
FNDC3B-208ENST00000476794 GRXCR2A6NFK2 248 aa12.26□□□□□ -0.45
FNDC3B-208ENST00000476794 BRPF1P55201 1214 aaPredicted RBP12.26□□□□□ -0.45
FNDC3B-208ENST00000476794 TMEM132AQ24JP5 1023 aa12.24□□□□□ -0.45
FNDC3B-208ENST00000476794 HCSTQ9UBK5 93 aa12.24□□□□□ -0.45
FNDC3B-208ENST00000476794 FOSBP53539 338 aa12.23□□□□□ -0.45
FNDC3B-208ENST00000476794 BCL2L12Q9HB09 334 aa12.23□□□□□ -0.45
FNDC3B-208ENST00000476794 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
FNDC3B-208ENST00000476794 SLC4A5Q9BY07 1137 aa12.22□□□□□ -0.45
FNDC3B-208ENST00000476794 KRI1Q8N9T8 703 aaKnown RBP12.21□□□□□ -0.45
FNDC3B-208ENST00000476794 VPS9D1Q9Y2B5 631 aa12.2□□□□□ -0.46
FNDC3B-208ENST00000476794 EVI5O60447 810 aa12.18□□□□□ -0.46
FNDC3B-208ENST00000476794 ZNF454Q8N9F8 522 aa12.18□□□□□ -0.46
FNDC3B-208ENST00000476794 DDX12PQ92771 950 aa12.18□□□□□ -0.46
FNDC3B-208ENST00000476794 KCNK17Q96T54 332 aa12.18□□□□□ -0.46
FNDC3B-208ENST00000476794 AK7Q96M32 723 aa12.17□□□□□ -0.46
FNDC3B-208ENST00000476794 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
FNDC3B-208ENST00000476794 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
FNDC3B-208ENST00000476794 OSBPP22059 807 aa12.16□□□□□ -0.46
FNDC3B-208ENST00000476794 GPR37O15354 613 aa12.15□□□□□ -0.46
FNDC3B-208ENST00000476794 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
FNDC3B-208ENST00000476794 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
FNDC3B-208ENST00000476794 KCNH8Q96L42 1107 aa12.13□□□□□ -0.47
FNDC3B-208ENST00000476794 PLA2G2EQ9NZK7 142 aa12.12□□□□□ -0.47
FNDC3B-208ENST00000476794 ZBED2Q9BTP6 218 aa12.11□□□□□ -0.47
FNDC3B-208ENST00000476794 PTPREP23469 700 aa12.1□□□□□ -0.47
FNDC3B-208ENST00000476794 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
FNDC3B-208ENST00000476794 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
FNDC3B-208ENST00000476794 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
FNDC3B-208ENST00000476794 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
FNDC3B-208ENST00000476794 TRIM66O15016 1216 aa12.07□□□□□ -0.48
FNDC3B-208ENST00000476794 FCHSD2O94868 740 aa12.05□□□□□ -0.48
FNDC3B-208ENST00000476794 GPBP1L1Q9HC44 474 aaPredicted RBP12.05□□□□□ -0.48
FNDC3B-208ENST00000476794 PCDHGA10Q9Y5H3 936 aa12.05□□□□□ -0.48
FNDC3B-208ENST00000476794 GNPATO15228 680 aa12.04□□□□□ -0.48
FNDC3B-208ENST00000476794 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
FNDC3B-208ENST00000476794 PDE4DQ08499 809 aa12.03□□□□□ -0.48
FNDC3B-208ENST00000476794 HIC1Q14526 733 aa12.03□□□□□ -0.48
FNDC3B-208ENST00000476794 MINK1Q8N4C8 1332 aaPredicted RBP12.03□□□□□ -0.48
FNDC3B-208ENST00000476794 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
FNDC3B-208ENST00000476794 PHF14O94880 888 aa12.01□□□□□ -0.49
FNDC3B-208ENST00000476794 FECHP22830 423 aa12.01□□□□□ -0.49
FNDC3B-208ENST00000476794 CCDC102AQ96A19 550 aa12□□□□□ -0.49
FNDC3B-208ENST00000476794 IRF6O14896 467 aa11.99□□□□□ -0.49
FNDC3B-208ENST00000476794 PTGDRQ13258 359 aa11.99□□□□□ -0.49
FNDC3B-208ENST00000476794 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
FNDC3B-208ENST00000476794 EPAS1Q99814 870 aa11.99□□□□□ -0.49
FNDC3B-208ENST00000476794 KDM4CQ9H3R0 1056 aa11.99□□□□□ -0.49
FNDC3B-208ENST00000476794 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
FNDC3B-208ENST00000476794 IFFO2Q5TF58 517 aa11.98□□□□□ -0.49
FNDC3B-208ENST00000476794 RBM33Q96EV2 1170 aaKnown RBP11.98□□□□□ -0.49
FNDC3B-208ENST00000476794 TIMELESSQ9UNS1 1208 aa11.98□□□□□ -0.49
FNDC3B-208ENST00000476794 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
FNDC3B-208ENST00000476794 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
FNDC3B-208ENST00000476794 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
FNDC3B-208ENST00000476794 MAP3K7O43318 606 aa11.96□□□□□ -0.49
FNDC3B-208ENST00000476794 COL9A1P20849 921 aa11.95□□□□□ -0.5
FNDC3B-208ENST00000476794 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
FNDC3B-208ENST00000476794 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
FNDC3B-208ENST00000476794 RABGEF1Q9UJ41 708 aa11.95□□□□□ -0.5
FNDC3B-208ENST00000476794 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
FNDC3B-208ENST00000476794 PTPN5P54829 565 aa11.93□□□□□ -0.5
FNDC3B-208ENST00000476794 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
FNDC3B-208ENST00000476794 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
FNDC3B-208ENST00000476794 WNT2BQ93097 391 aa11.92□□□□□ -0.5
FNDC3B-208ENST00000476794 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
FNDC3B-208ENST00000476794 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
FNDC3B-208ENST00000476794 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
FNDC3B-208ENST00000476794 AMHR2Q16671 573 aa11.89□□□□□ -0.51
FNDC3B-208ENST00000476794 GOLGA8CPA6NN73 597 aa11.87□□□□□ -0.51
FNDC3B-208ENST00000476794 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
FNDC3B-208ENST00000476794 LAPTM4BQ86VI4 370 aa11.87□□□□□ -0.51
FNDC3B-208ENST00000476794 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
FNDC3B-208ENST00000476794 DAXXQ9UER7 740 aaPredicted RBP11.87□□□□□ -0.51
FNDC3B-208ENST00000476794 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
FNDC3B-208ENST00000476794 FAM117AQ9C073 453 aa11.85□□□□□ -0.51
FNDC3B-208ENST00000476794 RGS20O76081 388 aa11.84□□□□□ -0.51
FNDC3B-208ENST00000476794 TTLL12Q14166 644 aaPredicted RBP11.84□□□□□ -0.51
FNDC3B-208ENST00000476794 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
FNDC3B-208ENST00000476794 KIAA1468Q9P260 1216 aa11.82□□□□□ -0.52
FNDC3B-208ENST00000476794 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
FNDC3B-208ENST00000476794 TRIM6-TRIM34B2RNG4 842 aa11.79□□□□□ -0.52
FNDC3B-208ENST00000476794 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
FNDC3B-208ENST00000476794 A0A0G2JS52 829 aa11.78□□□□□ -0.52
FNDC3B-208ENST00000476794 ITGBL1O95965 494 aaPredicted RBP11.78□□□□□ -0.52
FNDC3B-208ENST00000476794 PADI6Q6TGC4 694 aa11.78□□□□□ -0.52
FNDC3B-208ENST00000476794 GIGYF2Q6Y7W6 1299 aaKnown RBP11.78□□□□□ -0.52
FNDC3B-208ENST00000476794 CERKQ8TCT0 537 aa11.78□□□□□ -0.52
FNDC3B-208ENST00000476794 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
FNDC3B-208ENST00000476794 ZFRQ96KR1 1074 aaKnown RBP11.78□□□□□ -0.52
FNDC3B-208ENST00000476794 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
FNDC3B-208ENST00000476794 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
FNDC3B-208ENST00000476794 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
FNDC3B-208ENST00000476794 PHOX2BQ99453 314 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms