RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
TTC3-215ENST00000476784 CCDC27Q2M243 656 aa8.37□□□□□ -1.07
TTC3-215ENST00000476784 TTLL12Q14166 644 aaPredicted RBP8.36□□□□□ -1.07
TTC3-215ENST00000476784 ACIN1Q9UKV3 1341 aaKnown RBP8.36□□□□□ -1.07
TTC3-215ENST00000476784 C16orf71Q8IYS4 520 aaPredicted RBP8.36□□□□□ -1.07
TTC3-215ENST00000476784 RBM5P52756 815 aaKnown RBP eCLIP8.36□□□□□ -1.078e-6■■■■□ 20.7
TTC3-215ENST00000476784 HSCBQ8IWL3 235 aa8.36□□□□□ -1.07
TTC3-215ENST00000476784 CHMP4AQ9BY43 222 aa8.36□□□□□ -1.07
TTC3-215ENST00000476784 PATL2C9JE40 543 aaKnown RBP8.36□□□□□ -1.07
TTC3-215ENST00000476784 ZFYVE27Q5T4F4 411 aa8.36□□□□□ -1.07
TTC3-215ENST00000476784 WDHD1O75717 1129 aaPredicted RBP8.36□□□□□ -1.07
TTC3-215ENST00000476784 MAP3K9P80192 1104 aa8.36□□□□□ -1.07
TTC3-215ENST00000476784 SYNE3Q6ZMZ3 975 aa8.36□□□□□ -1.07
TTC3-215ENST00000476784 EIF2S2P20042 333 aaKnown RBP8.35□□□□□ -1.07
TTC3-215ENST00000476784 ODF2Q5BJF6 829 aa8.35□□□□□ -1.07
TTC3-215ENST00000476784 ITPRIPQ8IWB1 547 aa8.35□□□□□ -1.07
TTC3-215ENST00000476784 CCNB3Q8WWL7 1395 aa8.35□□□□□ -1.07
TTC3-215ENST00000476784 HTATSF1O43719 755 aaKnown RBP8.35□□□□□ -1.07
TTC3-215ENST00000476784 PLIN1O60240 522 aa8.35□□□□□ -1.07
TTC3-215ENST00000476784 SF3A1Q15459 793 aaKnown RBP8.35□□□□□ -1.07
TTC3-215ENST00000476784 TCERG1O14776 1098 aaKnown RBP8.35□□□□□ -1.07
TTC3-215ENST00000476784 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
TTC3-215ENST00000476784 TEFQ10587 303 aa8.35□□□□□ -1.07
TTC3-215ENST00000476784 AK7Q96M32 723 aa8.34□□□□□ -1.07
TTC3-215ENST00000476784 CALD1Q05682 793 aaKnown RBP8.34□□□□□ -1.07
TTC3-215ENST00000476784 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
TTC3-215ENST00000476784 HDAC5Q9UQL6 1122 aa8.34□□□□□ -1.07
TTC3-215ENST00000476784 ZCCHC6Q5VYS8 1495 aaKnown RBP8.34□□□□□ -1.07
TTC3-215ENST00000476784 CA8P35219 290 aa8.34□□□□□ -1.08
TTC3-215ENST00000476784 ATP2B2Q01814 1243 aa8.33□□□□□ -1.08
TTC3-215ENST00000476784 CT47A1Q5JQC4 288 aaPredicted RBP8.33□□□□□ -1.08
TTC3-215ENST00000476784 TPM3P06753 285 aa8.33□□□□□ -1.08
TTC3-215ENST00000476784 FAM69CQ0P6D2 419 aa8.33□□□□□ -1.08
TTC3-215ENST00000476784 TPM2P07951 284 aa8.32□□□□□ -1.08
TTC3-215ENST00000476784 NAP1L5Q96NT1 182 aaPredicted RBP8.32□□□□□ -1.08
TTC3-215ENST00000476784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.32□□□□□ -1.08
TTC3-215ENST00000476784 IPO8O15397 1037 aaKnown RBP8.32□□□□□ -1.08
TTC3-215ENST00000476784 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.32□□□□□ -1.08
TTC3-215ENST00000476784 CLIP1P30622 1438 aa8.32□□□□□ -1.08
TTC3-215ENST00000476784 RBM42Q9BTD8 480 aaKnown RBP8.32□□□□□ -1.08
TTC3-215ENST00000476784 NUTM2GQ5VZR2 741 aa8.32□□□□□ -1.08
TTC3-215ENST00000476784 TSR1Q2NL82 804 aaKnown RBP8.31□□□□□ -1.08
TTC3-215ENST00000476784 TERF2IPQ9NYB0 399 aa8.31□□□□□ -1.08
TTC3-215ENST00000476784 MPHOSPH10O00566 681 aaKnown RBP8.31□□□□□ -1.08
TTC3-215ENST00000476784 NEXNQ0ZGT2 675 aa8.31□□□□□ -1.08
TTC3-215ENST00000476784 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
TTC3-215ENST00000476784 EFCAB2Q5VUJ9 269 aa8.3□□□□□ -1.08
TTC3-215ENST00000476784 PDE3BQ13370 1112 aa8.3□□□□□ -1.08
TTC3-215ENST00000476784 H3BQV1 296 aa8.29□□□□□ -1.08
TTC3-215ENST00000476784 IFFO2Q5TF58 517 aa8.29□□□□□ -1.08
TTC3-215ENST00000476784 NFXL1Q6ZNB6 911 aa8.29□□□□□ -1.08
TTC3-215ENST00000476784 WDR78Q5VTH9 848 aa8.29□□□□□ -1.08
TTC3-215ENST00000476784 RAPGEF4Q8WZA2 1011 aa8.29□□□□□ -1.08
TTC3-215ENST00000476784 OSCARQ8IYS5 282 aa8.28□□□□□ -1.08
TTC3-215ENST00000476784 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
TTC3-215ENST00000476784 ARID3AQ99856 593 aa8.28□□□□□ -1.08
TTC3-215ENST00000476784 C9orf78Q9NZ63 289 aaPredicted RBP8.28□□□□□ -1.08
TTC3-215ENST00000476784 KDM4AO75164 1064 aa8.28□□□□□ -1.08
TTC3-215ENST00000476784 ERICH2A1L162 156 aa8.28□□□□□ -1.08
TTC3-215ENST00000476784 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
TTC3-215ENST00000476784 FOXD4L5Q5VV16 416 aaPredicted RBP8.28□□□□□ -1.08
TTC3-215ENST00000476784 MCTP1Q6DN14 999 aa8.28□□□□□ -1.08
TTC3-215ENST00000476784 FOXD4L4Q8WXT5 416 aaPredicted RBP8.28□□□□□ -1.08
TTC3-215ENST00000476784 HMMRO75330 724 aa8.27□□□□□ -1.09
TTC3-215ENST00000476784 TRIM29Q14134 588 aa8.27□□□□□ -1.09
TTC3-215ENST00000476784 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
TTC3-215ENST00000476784 RILPL2Q969X0 211 aa8.27□□□□□ -1.09
TTC3-215ENST00000476784 ELL2O00472 640 aaPredicted RBP8.27□□□□□ -1.09
TTC3-215ENST00000476784 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
TTC3-215ENST00000476784 CCDC47Q96A33 483 aaKnown RBP8.27□□□□□ -1.09
TTC3-215ENST00000476784 ZNF219Q9P2Y4 722 aaPredicted RBP8.27□□□□□ -1.09
TTC3-215ENST00000476784 PROSER2Q86WR7 435 aaPredicted RBP8.26□□□□□ -1.09
TTC3-215ENST00000476784 COG3Q96JB2 828 aa8.26□□□□□ -1.09
TTC3-215ENST00000476784 ECM2O94769 699 aaPredicted RBP8.26□□□□□ -1.09
TTC3-215ENST00000476784 AIMP1Q12904 312 aaKnown RBP8.26□□□□□ -1.09
TTC3-215ENST00000476784 CLEC11AQ9Y240 323 aa8.26□□□□□ -1.09
TTC3-215ENST00000476784 MSNP26038 577 aaKnown RBP8.26□□□□□ -1.09
TTC3-215ENST00000476784 SMC4Q9NTJ3 1288 aa8.26□□□□□ -1.09
TTC3-215ENST00000476784 KIF16BQ96L93 1317 aa8.25□□□□□ -1.09
TTC3-215ENST00000476784 CRBNQ96SW2 442 aa8.25□□□□□ -1.09
TTC3-215ENST00000476784 RFX1P22670 979 aa8.25□□□□□ -1.09
TTC3-215ENST00000476784 CCAR2Q8N163 923 aaKnown RBP8.25□□□□□ -1.09
TTC3-215ENST00000476784 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
TTC3-215ENST00000476784 FOXD4L1Q9NU39 408 aa8.25□□□□□ -1.09
TTC3-215ENST00000476784 LRRFIP1Q32MZ4 808 aaKnown RBP8.25□□□□□ -1.09
TTC3-215ENST00000476784 EPS15P42566 896 aa8.24□□□□□ -1.09
TTC3-215ENST00000476784 BICDL1Q6ZP65 573 aa8.24□□□□□ -1.09
TTC3-215ENST00000476784 FOSBP53539 338 aa8.24□□□□□ -1.09
TTC3-215ENST00000476784 DDX54Q8TDD1 881 aaKnown RBP8.24□□□□□ -1.09
TTC3-215ENST00000476784 MATR3P43243 847 aaKnown RBP eCLIP8.24□□□□□ -1.097e-7■■□□□ 11.5
TTC3-215ENST00000476784 TRDNQ13061 729 aa8.24□□□□□ -1.09
TTC3-215ENST00000476784 ESCO1Q5FWF5 840 aa8.24□□□□□ -1.09
TTC3-215ENST00000476784 CARMIL2Q6F5E8 1435 aa8.24□□□□□ -1.09
TTC3-215ENST00000476784 NEBLO76041 1014 aa8.23□□□□□ -1.09
TTC3-215ENST00000476784 HNRNPMP52272 730 aaKnown RBP eCLIP8.23□□□□□ -1.095e-8■■■■■ 29.2
TTC3-215ENST00000476784 HSP90AB2PQ58FF8 381 aa8.23□□□□□ -1.09
TTC3-215ENST00000476784 KIF3AQ9Y496 699 aa8.23□□□□□ -1.09
TTC3-215ENST00000476784 NAP1L1P55209 391 aaKnown RBP8.23□□□□□ -1.09
TTC3-215ENST00000476784 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
TTC3-215ENST00000476784 SCLT1Q96NL6 688 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms