RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 DUOX2Q9NRD8 1548 aa15.75■□□□□ 0.11
CCM2-208ENST00000476594 HSPA2P54652 639 aa15.75■□□□□ 0.11
CCM2-208ENST00000476594 DAPK1P53355 1430 aa15.75■□□□□ 0.11
CCM2-208ENST00000476594 DNMT1P26358 1616 aaKnown RBP15.75■□□□□ 0.11
CCM2-208ENST00000476594 WASHC2CQ9Y4E1 1318 aa15.74■□□□□ 0.11
CCM2-208ENST00000476594 CROCC2H7BZ55 1655 aa15.74■□□□□ 0.11
CCM2-208ENST00000476594 DMRT2Q9Y5R5 561 aa15.73■□□□□ 0.11
CCM2-208ENST00000476594 ABCC5O15440 1437 aa15.73■□□□□ 0.11
CCM2-208ENST00000476594 ANKRD30AQ9BXX3 1397 aa15.73■□□□□ 0.11
CCM2-208ENST00000476594 KIF15Q9NS87 1388 aa15.73■□□□□ 0.11
CCM2-208ENST00000476594 ERBINQ96RT1 1412 aa15.71■□□□□ 0.11
CCM2-208ENST00000476594 FAM50AQ14320 339 aaKnown RBP15.71■□□□□ 0.11
CCM2-208ENST00000476594 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
CCM2-208ENST00000476594 ZC3H13Q5T200 1668 aaKnown RBP15.7■□□□□ 0.1
CCM2-208ENST00000476594 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
CCM2-208ENST00000476594 PZPP20742 1482 aa15.68■□□□□ 0.1
CCM2-208ENST00000476594 KANK1Q14678 1352 aa15.67■□□□□ 0.1
CCM2-208ENST00000476594 RRP7BPQ9NSQ0 103 aa15.67■□□□□ 0.1
CCM2-208ENST00000476594 MYO3AQ8NEV4 1616 aa15.66■□□□□ 0.1
CCM2-208ENST00000476594 ZNF142P52746 1687 aaPredicted RBP15.65■□□□□ 0.1
CCM2-208ENST00000476594 CHIC2Q9UKJ5 165 aa15.65■□□□□ 0.1
CCM2-208ENST00000476594 ADGRL2O95490 1459 aa15.65■□□□□ 0.1
CCM2-208ENST00000476594 TNRQ92752 1358 aa15.64■□□□□ 0.09
CCM2-208ENST00000476594 CEP170BQ9Y4F5 1589 aaPredicted RBP15.64■□□□□ 0.09
CCM2-208ENST00000476594 ABCC3O15438 1527 aa15.63■□□□□ 0.09
CCM2-208ENST00000476594 NCOA1Q15788 1441 aa15.63■□□□□ 0.09
CCM2-208ENST00000476594 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
CCM2-208ENST00000476594 A2ML1A8K2U0 1454 aa15.62■□□□□ 0.09
CCM2-208ENST00000476594 CAMSAP1Q5T5Y3 1602 aa15.61■□□□□ 0.09
CCM2-208ENST00000476594 PLA2R1Q13018 1463 aa15.61■□□□□ 0.09
CCM2-208ENST00000476594 NLRP1Q9C000 1473 aa15.61■□□□□ 0.09
CCM2-208ENST00000476594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCM2-208ENST00000476594 PTPRTO14522 1441 aa15.6■□□□□ 0.09
CCM2-208ENST00000476594 PKD2Q13563 968 aa15.6■□□□□ 0.09
CCM2-208ENST00000476594 MROH1Q8NDA8 1641 aa15.59■□□□□ 0.09
CCM2-208ENST00000476594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
CCM2-208ENST00000476594 DEPDC5O75140 1603 aa15.58■□□□□ 0.09
CCM2-208ENST00000476594 STRCQ7RTU9 1775 aa15.58■□□□□ 0.08
CCM2-208ENST00000476594 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.08
CCM2-208ENST00000476594 ANKRD50Q9ULJ7 1429 aa15.58■□□□□ 0.08
CCM2-208ENST00000476594 CEP152O94986 1710 aa15.57■□□□□ 0.08
CCM2-208ENST00000476594 ROCK1Q13464 1354 aa15.57■□□□□ 0.08
CCM2-208ENST00000476594 ARHGAP31Q2M1Z3 1444 aa15.57■□□□□ 0.08
CCM2-208ENST00000476594 SPATA31D1Q6ZQQ2 1576 aa15.57■□□□□ 0.08
CCM2-208ENST00000476594 THEMISQ8N1K5 641 aaPredicted RBP15.56■□□□□ 0.08
CCM2-208ENST00000476594 ERVK-7P63135 1459 aa15.55■□□□□ 0.08
CCM2-208ENST00000476594 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
CCM2-208ENST00000476594 UGGT1Q9NYU2 1555 aa15.54■□□□□ 0.08
CCM2-208ENST00000476594 FBXO41Q8TF61 875 aa15.54■□□□□ 0.08
CCM2-208ENST00000476594 LMTK2Q8IWU2 1503 aa15.53■□□□□ 0.08
CCM2-208ENST00000476594 ITGAEP38570 1179 aa15.52■□□□□ 0.08
CCM2-208ENST00000476594 ANKLE2Q86XL3 938 aa15.51■□□□□ 0.07
CCM2-208ENST00000476594 CERKQ8TCT0 537 aa15.51■□□□□ 0.07
CCM2-208ENST00000476594 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
CCM2-208ENST00000476594 VWDEQ8N2E2 1590 aa15.5■□□□□ 0.07
CCM2-208ENST00000476594 NCKAP5LQ9HCH0 1330 aa15.5■□□□□ 0.07
CCM2-208ENST00000476594 EFCAB6Q5THR3 1501 aa15.48■□□□□ 0.07
CCM2-208ENST00000476594 RPRD2Q5VT52 1461 aaKnown RBP15.48■□□□□ 0.07
CCM2-208ENST00000476594 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
CCM2-208ENST00000476594 POLR1AO95602 1720 aaPredicted RBP15.48■□□□□ 0.07
CCM2-208ENST00000476594 UNC13BO14795 1591 aa15.46■□□□□ 0.07
CCM2-208ENST00000476594 CFAP65Q6ZU64 1925 aaKnown RBP15.45■□□□□ 0.06
CCM2-208ENST00000476594 TET3O43151 1660 aa15.44■□□□□ 0.06
CCM2-208ENST00000476594 SLC52A1Q9NWF4 448 aa15.44■□□□□ 0.06
CCM2-208ENST00000476594 IQSEC2Q5JU85 1478 aa15.44■□□□□ 0.06
CCM2-208ENST00000476594 EID1Q9Y6B2 187 aa15.43■□□□□ 0.06
CCM2-208ENST00000476594 NPHP4O75161 1426 aaPredicted RBP15.43■□□□□ 0.06
CCM2-208ENST00000476594 GCC2Q8IWJ2 1684 aa15.42■□□□□ 0.06
CCM2-208ENST00000476594 MED14O60244 1454 aa15.42■□□□□ 0.06
CCM2-208ENST00000476594 UBR1Q8IWV7 1749 aa15.42■□□□□ 0.06
CCM2-208ENST00000476594 NOS1P29475 1434 aa15.42■□□□□ 0.06
CCM2-208ENST00000476594 NUP155O75694 1391 aa15.41■□□□□ 0.06
CCM2-208ENST00000476594 KDM5AP29375 1690 aaKnown RBP15.41■□□□□ 0.06
CCM2-208ENST00000476594 IQGAP3Q86VI3 1631 aa15.4■□□□□ 0.06
CCM2-208ENST00000476594 NEURL4Q96JN8 1562 aa15.4■□□□□ 0.06
CCM2-208ENST00000476594 ZNF335Q9H4Z2 1342 aaPredicted RBP15.4■□□□□ 0.06
CCM2-208ENST00000476594 SCAF11Q99590 1463 aaKnown RBP15.4■□□□□ 0.06
CCM2-208ENST00000476594 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
CCM2-208ENST00000476594 SLIT1O75093 1534 aa15.39■□□□□ 0.05
CCM2-208ENST00000476594 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
CCM2-208ENST00000476594 IQGAP1P46940 1657 aa15.38■□□□□ 0.05
CCM2-208ENST00000476594 CPS1P31327 1500 aa15.38■□□□□ 0.05
CCM2-208ENST00000476594 SYNMO15061 1565 aa15.37■□□□□ 0.05
CCM2-208ENST00000476594 HDGFP51858 240 aaKnown RBP15.37■□□□□ 0.05
CCM2-208ENST00000476594 IDI1Q13907 227 aa15.37■□□□□ 0.05
CCM2-208ENST00000476594 TXNDC2Q86VQ3 553 aa15.37■□□□□ 0.05
CCM2-208ENST00000476594 ARHGAP23Q9P227 1491 aa15.37■□□□□ 0.05
CCM2-208ENST00000476594 ADGRB3O60242 1522 aa15.37■□□□□ 0.05
CCM2-208ENST00000476594 TMEM2Q9UHN6 1383 aa15.36■□□□□ 0.05
CCM2-208ENST00000476594 HFM1A2PYH4 1435 aa15.34■□□□□ 0.05
CCM2-208ENST00000476594 NAIPQ13075 1403 aa15.34■□□□□ 0.05
CCM2-208ENST00000476594 ACIN1Q9UKV3 1341 aaKnown RBP15.33■□□□□ 0.04
CCM2-208ENST00000476594 E9PCH4 1651 aa15.32■□□□□ 0.04
CCM2-208ENST00000476594 CHGAP10645 457 aaKnown RBP15.31■□□□□ 0.04
CCM2-208ENST00000476594 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCM2-208ENST00000476594 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
CCM2-208ENST00000476594 LTKP29376 864 aa15.3■□□□□ 0.04
CCM2-208ENST00000476594 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
CCM2-208ENST00000476594 BCANQ96GW7 911 aa15.29■□□□□ 0.04
CCM2-208ENST00000476594 UBAP1LF5GYI3 381 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms