RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 NCOA1Q15788 1441 aa27.61■■■□□ 2.01
LCLAT1-208ENST00000476535 RNF17Q9BXT8 1623 aaKnown RBP27.61■■■□□ 2.01
LCLAT1-208ENST00000476535 EIF2AK4Q9P2K8 1649 aaKnown RBP27.61■■■□□ 2.01
LCLAT1-208ENST00000476535 CROCC2H7BZ55 1655 aa27.6■■■□□ 2.01
LCLAT1-208ENST00000476535 SHANK2Q9UPX8 1470 aa27.6■■■□□ 2.01
LCLAT1-208ENST00000476535 PTPRTO14522 1441 aa27.59■■■□□ 2.01
LCLAT1-208ENST00000476535 FGD6Q6ZV73 1430 aa27.58■■■□□ 2.01
LCLAT1-208ENST00000476535 CEP170BQ9Y4F5 1589 aaPredicted RBP27.58■■■□□ 2.01
LCLAT1-208ENST00000476535 TCOF1Q13428 1488 aaKnown RBP27.57■■■□□ 2
LCLAT1-208ENST00000476535 CAMSAP1Q5T5Y3 1602 aa27.57■■■□□ 2
LCLAT1-208ENST00000476535 PZPP20742 1482 aa27.57■■■□□ 2
LCLAT1-208ENST00000476535 WASHC2CQ9Y4E1 1318 aa27.55■■■□□ 2
LCLAT1-208ENST00000476535 ABCC5O15440 1437 aa27.55■■■□□ 2
LCLAT1-208ENST00000476535 DUOX2Q9NRD8 1548 aa27.55■■■□□ 2
LCLAT1-208ENST00000476535 DNMT1P26358 1616 aaKnown RBP27.54■■■□□ 2
LCLAT1-208ENST00000476535 ZC3H13Q5T200 1668 aaKnown RBP27.53■■■□□ 2
LCLAT1-208ENST00000476535 PLA2R1Q13018 1463 aa27.52■■■□□ 2
LCLAT1-208ENST00000476535 DAPK1P53355 1430 aa27.51■■□□□ 1.99
LCLAT1-208ENST00000476535 CERKQ8TCT0 537 aa27.51■■□□□ 1.99
LCLAT1-208ENST00000476535 A2ML1A8K2U0 1454 aa27.51■■□□□ 1.99
LCLAT1-208ENST00000476535 MROH1Q8NDA8 1641 aa27.49■■□□□ 1.99
LCLAT1-208ENST00000476535 ABCC3O15438 1527 aa27.49■■□□□ 1.99
LCLAT1-208ENST00000476535 TNRQ92752 1358 aa27.48■■□□□ 1.99
LCLAT1-208ENST00000476535 KIF15Q9NS87 1388 aa27.48■■□□□ 1.99
LCLAT1-208ENST00000476535 ERBINQ96RT1 1412 aa27.46■■□□□ 1.99
LCLAT1-208ENST00000476535 FBXO31Q5XUX0 539 aaPredicted RBP27.45■■□□□ 1.98
LCLAT1-208ENST00000476535 PKD2Q13563 968 aa27.44■■□□□ 1.98
LCLAT1-208ENST00000476535 PRDM15P57071 1507 aaPredicted RBP27.41■■□□□ 1.98
LCLAT1-208ENST00000476535 NLRP1Q9C000 1473 aa27.41■■□□□ 1.98
LCLAT1-208ENST00000476535 CEP152O94986 1710 aa27.41■■□□□ 1.98
LCLAT1-208ENST00000476535 NCKAP5LQ9HCH0 1330 aa27.4■■□□□ 1.98
LCLAT1-208ENST00000476535 SPATA31D1Q6ZQQ2 1576 aa27.39■■□□□ 1.98
LCLAT1-208ENST00000476535 RRP7BPQ9NSQ0 103 aa27.39■■□□□ 1.98
LCLAT1-208ENST00000476535 DEPDC5O75140 1603 aa27.38■■□□□ 1.97
LCLAT1-208ENST00000476535 LTBP4Q8N2S1 1624 aa27.38■■□□□ 1.97
LCLAT1-208ENST00000476535 ANKRD30AQ9BXX3 1397 aa27.38■■□□□ 1.97
LCLAT1-208ENST00000476535 ADGRL2O95490 1459 aa27.36■■□□□ 1.97
LCLAT1-208ENST00000476535 ERVK-7P63135 1459 aa27.35■■□□□ 1.97
LCLAT1-208ENST00000476535 POLR1AO95602 1720 aaPredicted RBP27.35■■□□□ 1.97
LCLAT1-208ENST00000476535 ARHGAP31Q2M1Z3 1444 aa27.33■■□□□ 1.96
LCLAT1-208ENST00000476535 UGGT1Q9NYU2 1555 aa27.32■■□□□ 1.96
LCLAT1-208ENST00000476535 CHIC2Q9UKJ5 165 aa27.31■■□□□ 1.96
LCLAT1-208ENST00000476535 CFAP65Q6ZU64 1925 aaKnown RBP27.31■■□□□ 1.96
LCLAT1-208ENST00000476535 IQSEC2Q5JU85 1478 aa27.31■■□□□ 1.96
LCLAT1-208ENST00000476535 FAM50AQ14320 339 aaKnown RBP27.29■■□□□ 1.96
LCLAT1-208ENST00000476535 NEURL4Q96JN8 1562 aa27.28■■□□□ 1.96
LCLAT1-208ENST00000476535 THEMISQ8N1K5 641 aaPredicted RBP27.28■■□□□ 1.96
LCLAT1-208ENST00000476535 VWDEQ8N2E2 1590 aa27.26■■□□□ 1.96
LCLAT1-208ENST00000476535 KANK1Q14678 1352 aa27.26■■□□□ 1.95
LCLAT1-208ENST00000476535 LMTK2Q8IWU2 1503 aa27.26■■□□□ 1.95
LCLAT1-208ENST00000476535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.25■■□□□ 1.95
LCLAT1-208ENST00000476535 ZNF335Q9H4Z2 1342 aaPredicted RBP27.23■■□□□ 1.95
LCLAT1-208ENST00000476535 ANKLE2Q86XL3 938 aa27.22■■□□□ 1.95
LCLAT1-208ENST00000476535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.22■■□□□ 1.95
LCLAT1-208ENST00000476535 MED14O60244 1454 aa27.2■■□□□ 1.95
LCLAT1-208ENST00000476535 UBR1Q8IWV7 1749 aa27.2■■□□□ 1.94
LCLAT1-208ENST00000476535 ANKRD50Q9ULJ7 1429 aa27.19■■□□□ 1.94
LCLAT1-208ENST00000476535 EFCAB6Q5THR3 1501 aa27.16■■□□□ 1.94
LCLAT1-208ENST00000476535 NPHP4O75161 1426 aaPredicted RBP27.15■■□□□ 1.94
LCLAT1-208ENST00000476535 ROCK1Q13464 1354 aa27.14■■□□□ 1.94
LCLAT1-208ENST00000476535 IQGAP1P46940 1657 aa27.14■■□□□ 1.93
LCLAT1-208ENST00000476535 KDM5AP29375 1690 aaKnown RBP27.11■■□□□ 1.93
LCLAT1-208ENST00000476535 SLIT1O75093 1534 aa27.11■■□□□ 1.93
LCLAT1-208ENST00000476535 CPS1P31327 1500 aa27.11■■□□□ 1.93
LCLAT1-208ENST00000476535 ARHGAP23Q9P227 1491 aa27.1■■□□□ 1.93
LCLAT1-208ENST00000476535 PIK3C2BO00750 1634 aa27.09■■□□□ 1.93
LCLAT1-208ENST00000476535 UNC13BO14795 1591 aa27.09■■□□□ 1.93
LCLAT1-208ENST00000476535 NOS1P29475 1434 aa27.08■■□□□ 1.93
LCLAT1-208ENST00000476535 RPRD2Q5VT52 1461 aaKnown RBP27.08■■□□□ 1.93
LCLAT1-208ENST00000476535 SYNMO15061 1565 aa27.08■■□□□ 1.93
LCLAT1-208ENST00000476535 SCAF11Q99590 1463 aaKnown RBP27.07■■□□□ 1.92
LCLAT1-208ENST00000476535 TET3O43151 1660 aa27.07■■□□□ 1.92
LCLAT1-208ENST00000476535 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
LCLAT1-208ENST00000476535 GCC2Q8IWJ2 1684 aa27.03■■□□□ 1.92
LCLAT1-208ENST00000476535 TMEM2Q9UHN6 1383 aa27■■□□□ 1.91
LCLAT1-208ENST00000476535 IDI1Q13907 227 aa27■■□□□ 1.91
LCLAT1-208ENST00000476535 LTKP29376 864 aa26.98■■□□□ 1.91
LCLAT1-208ENST00000476535 SLC52A1Q9NWF4 448 aa26.98■■□□□ 1.91
LCLAT1-208ENST00000476535 ADGRB3O60242 1522 aa26.98■■□□□ 1.91
LCLAT1-208ENST00000476535 RRBP1Q9P2E9 1410 aaKnown RBP26.98■■□□□ 1.91
LCLAT1-208ENST00000476535 IQGAP3Q86VI3 1631 aa26.98■■□□□ 1.91
LCLAT1-208ENST00000476535 UBAP1LF5GYI3 381 aa26.97■■□□□ 1.91
LCLAT1-208ENST00000476535 TXNDC2Q86VQ3 553 aa26.97■■□□□ 1.91
LCLAT1-208ENST00000476535 STAG3Q9UJ98 1225 aa26.97■■□□□ 1.91
LCLAT1-208ENST00000476535 EID1Q9Y6B2 187 aa26.97■■□□□ 1.91
LCLAT1-208ENST00000476535 STRCP1A6NGW2 1772 aa26.96■■□□□ 1.91
LCLAT1-208ENST00000476535 ITGAEP38570 1179 aa26.94■■□□□ 1.9
LCLAT1-208ENST00000476535 E9PCH4 1651 aa26.92■■□□□ 1.9
LCLAT1-208ENST00000476535 NUP155O75694 1391 aa26.87■■□□□ 1.89
LCLAT1-208ENST00000476535 LRRC7Q96NW7 1537 aa26.87■■□□□ 1.89
LCLAT1-208ENST00000476535 MYO5BQ9ULV0 1848 aa26.87■■□□□ 1.89
LCLAT1-208ENST00000476535 TOM1O60784 492 aa26.85■■□□□ 1.89
LCLAT1-208ENST00000476535 TMEM131LA2VDJ0 1609 aa26.85■■□□□ 1.89
LCLAT1-208ENST00000476535 ZFYVE9O95405 1425 aa26.82■■□□□ 1.88
LCLAT1-208ENST00000476535 ALKQ9UM73 1620 aa26.8■■□□□ 1.88
LCLAT1-208ENST00000476535 NAIPQ13075 1403 aa26.78■■□□□ 1.88
LCLAT1-208ENST00000476535 XIRP1Q702N8 1843 aaKnown RBP26.76■■□□□ 1.88
LCLAT1-208ENST00000476535 RIMS2Q9UQ26 1411 aa26.76■■□□□ 1.87
LCLAT1-208ENST00000476535 PLEKHG1Q9ULL1 1385 aa26.75■■□□□ 1.87
LCLAT1-208ENST00000476535 HDGFP51858 240 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms