RNA–Protein interactions for RNA: ENST00000475621.1

FGFR1-219, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 2

Gene FGFR1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-219ENST00000475621 KIF3BO15066 747 aa16.34■□□□□ 0.21
FGFR1-219ENST00000475621 WASHC2CQ9Y4E1 1318 aa16.34■□□□□ 0.21
FGFR1-219ENST00000475621 PLXNC1O60486 1568 aa16.34■□□□□ 0.21
FGFR1-219ENST00000475621 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
FGFR1-219ENST00000475621 ALKQ9UM73 1620 aa16.34■□□□□ 0.21
FGFR1-219ENST00000475621 PLEKHH2Q8IVE3 1493 aa16.33■□□□□ 0.2
FGFR1-219ENST00000475621 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
FGFR1-219ENST00000475621 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
FGFR1-219ENST00000475621 LRRC7Q96NW7 1537 aa16.31■□□□□ 0.2
FGFR1-219ENST00000475621 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
FGFR1-219ENST00000475621 MIA2Q96PC5 1412 aa16.31■□□□□ 0.2
FGFR1-219ENST00000475621 MED14O60244 1454 aa16.3■□□□□ 0.2
FGFR1-219ENST00000475621 DHX29Q7Z478 1369 aaKnown RBP16.3■□□□□ 0.2
FGFR1-219ENST00000475621 CCNB3Q8WWL7 1395 aa16.3■□□□□ 0.2
FGFR1-219ENST00000475621 ZNF644Q9H582 1327 aaPredicted RBP16.28■□□□□ 0.2
FGFR1-219ENST00000475621 PZPP20742 1482 aa16.28■□□□□ 0.2
FGFR1-219ENST00000475621 NLRP1Q9C000 1473 aa16.27■□□□□ 0.19
FGFR1-219ENST00000475621 UGGT1Q9NYU2 1555 aa16.26■□□□□ 0.19
FGFR1-219ENST00000475621 INO80Q9ULG1 1556 aaPredicted RBP16.26■□□□□ 0.19
FGFR1-219ENST00000475621 RTEL1-TNFRSF6BF6WH68 1400 aa16.23■□□□□ 0.19
FGFR1-219ENST00000475621 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
FGFR1-219ENST00000475621 POLR1AO95602 1720 aaPredicted RBP16.22■□□□□ 0.19
FGFR1-219ENST00000475621 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
FGFR1-219ENST00000475621 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
FGFR1-219ENST00000475621 LRRIQ1Q96JM4 1722 aa16.21■□□□□ 0.19
FGFR1-219ENST00000475621 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
FGFR1-219ENST00000475621 RNF17Q9BXT8 1623 aaKnown RBP16.2■□□□□ 0.18
FGFR1-219ENST00000475621 DEPDC5O75140 1603 aa16.19■□□□□ 0.18
FGFR1-219ENST00000475621 MTUS2Q5JR59 1369 aa16.19■□□□□ 0.18
FGFR1-219ENST00000475621 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
FGFR1-219ENST00000475621 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
FGFR1-219ENST00000475621 FYCO1Q9BQS8 1478 aa16.17■□□□□ 0.18
FGFR1-219ENST00000475621 UPF1Q92900 1129 aaKnown RBP eCLIP16.17■□□□□ 0.18
FGFR1-219ENST00000475621 LTKP29376 864 aa16.16■□□□□ 0.18
FGFR1-219ENST00000475621 IQGAP1P46940 1657 aa16.15■□□□□ 0.18
FGFR1-219ENST00000475621 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
FGFR1-219ENST00000475621 SYNMO15061 1565 aa16.15■□□□□ 0.18
FGFR1-219ENST00000475621 EID1Q9Y6B2 187 aa16.15■□□□□ 0.18
FGFR1-219ENST00000475621 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
FGFR1-219ENST00000475621 TMEM94Q12767 1356 aa16.13■□□□□ 0.17
FGFR1-219ENST00000475621 SCAF11Q99590 1463 aaKnown RBP16.12■□□□□ 0.17
FGFR1-219ENST00000475621 TSPY4P0CV99 314 aa16.12■□□□□ 0.17
FGFR1-219ENST00000475621 TSPY10P0CW01 314 aa16.12■□□□□ 0.17
FGFR1-219ENST00000475621 PROSER2Q86WR7 435 aaPredicted RBP16.11■□□□□ 0.17
FGFR1-219ENST00000475621 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
FGFR1-219ENST00000475621 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
FGFR1-219ENST00000475621 STRCP1A6NGW2 1772 aa16.1■□□□□ 0.17
FGFR1-219ENST00000475621 MEX3CQ5U5Q3 659 aaKnown RBP16.09■□□□□ 0.17
FGFR1-219ENST00000475621 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
FGFR1-219ENST00000475621 KCNA6P17658 529 aa16.08■□□□□ 0.16
FGFR1-219ENST00000475621 JCADQ9P266 1359 aa16.08■□□□□ 0.16
FGFR1-219ENST00000475621 CCDC141Q6ZP82 1450 aa16.08■□□□□ 0.16
FGFR1-219ENST00000475621 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
FGFR1-219ENST00000475621 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
FGFR1-219ENST00000475621 SLAIN2Q9P270 581 aa16.06■□□□□ 0.16
FGFR1-219ENST00000475621 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
FGFR1-219ENST00000475621 RXRBP28702 533 aa16.04■□□□□ 0.16
FGFR1-219ENST00000475621 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
FGFR1-219ENST00000475621 ABCC3O15438 1527 aa16.03■□□□□ 0.16
FGFR1-219ENST00000475621 TIAM1Q13009 1591 aa16.02■□□□□ 0.16
FGFR1-219ENST00000475621 ARHGAP23Q9P227 1491 aa16.02■□□□□ 0.15
FGFR1-219ENST00000475621 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.15
FGFR1-219ENST00000475621 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.15
FGFR1-219ENST00000475621 MSH6P52701 1360 aa16.01■□□□□ 0.15
FGFR1-219ENST00000475621 TMEM2Q9UHN6 1383 aa16.01■□□□□ 0.15
FGFR1-219ENST00000475621 BCANQ96GW7 911 aa16.01■□□□□ 0.15
FGFR1-219ENST00000475621 LRRC9Q6ZRR7 1453 aa16.01■□□□□ 0.15
FGFR1-219ENST00000475621 SPATA31A6Q5VVP1 1343 aa16■□□□□ 0.15
FGFR1-219ENST00000475621 SLIT1O75093 1534 aa16■□□□□ 0.15
FGFR1-219ENST00000475621 ZC3H13Q5T200 1668 aaKnown RBP15.99■□□□□ 0.15
FGFR1-219ENST00000475621 CAMSAP2Q08AD1 1489 aa15.98■□□□□ 0.15
FGFR1-219ENST00000475621 ROBO1Q9Y6N7 1651 aa15.98■□□□□ 0.15
FGFR1-219ENST00000475621 EHBP1L1Q8N3D4 1523 aa15.95■□□□□ 0.14
FGFR1-219ENST00000475621 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
FGFR1-219ENST00000475621 NUTM2BA6NNL0 878 aaPredicted RBP15.94■□□□□ 0.14
FGFR1-219ENST00000475621 NUTM2EB1AL46 878 aaPredicted RBP15.94■□□□□ 0.14
FGFR1-219ENST00000475621 NUTM2AQ8IVF1 878 aaPredicted RBP15.94■□□□□ 0.14
FGFR1-219ENST00000475621 LRP6O75581 1613 aa15.94■□□□□ 0.14
FGFR1-219ENST00000475621 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
FGFR1-219ENST00000475621 IDI1Q13907 227 aa15.93■□□□□ 0.14
FGFR1-219ENST00000475621 C14orf37Q86TY3 774 aa15.93■□□□□ 0.14
FGFR1-219ENST00000475621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.145e-8■□□□□ 10
FGFR1-219ENST00000475621 SRCAPQ6ZRS2 3230 aa15.93■□□□□ 0.14
FGFR1-219ENST00000475621 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
FGFR1-219ENST00000475621 FGD6Q6ZV73 1430 aa15.92■□□□□ 0.14
FGFR1-219ENST00000475621 APLP2Q06481 763 aa15.91■□□□□ 0.14
FGFR1-219ENST00000475621 ARHGAP31Q2M1Z3 1444 aa15.91■□□□□ 0.14
FGFR1-219ENST00000475621 XIRP1Q702N8 1843 aaKnown RBP15.9■□□□□ 0.14
FGFR1-219ENST00000475621 NKTRP30414 1462 aaKnown RBP15.9■□□□□ 0.14
FGFR1-219ENST00000475621 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
FGFR1-219ENST00000475621 AFF2P51816 1311 aa15.88■□□□□ 0.13
FGFR1-219ENST00000475621 CDK12Q9NYV4 1490 aaPredicted RBP15.87■□□□□ 0.13
FGFR1-219ENST00000475621 ATF3P18847 181 aa15.87■□□□□ 0.13
FGFR1-219ENST00000475621 FOXD1Q16676 465 aa15.87■□□□□ 0.13
FGFR1-219ENST00000475621 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
FGFR1-219ENST00000475621 PHLPP1O60346 1717 aa15.87■□□□□ 0.13
FGFR1-219ENST00000475621 ARHGEF5Q12774 1597 aa15.87■□□□□ 0.13
FGFR1-219ENST00000475621 EFCAB6Q5THR3 1501 aa15.86■□□□□ 0.13
FGFR1-219ENST00000475621 PPP1R15AO75807 674 aaPredicted RBP15.85■□□□□ 0.13
FGFR1-219ENST00000475621 RBM6P78332 1123 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms