RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 DISP3Q9P2K9 1392 aa28.57■■■□□ 2.16
PCGF3-209ENST00000475288 PZPP20742 1482 aa28.55■■■□□ 2.16
PCGF3-209ENST00000475288 ZNF335Q9H4Z2 1342 aaPredicted RBP28.55■■■□□ 2.16
PCGF3-209ENST00000475288 KIF3BO15066 747 aa28.52■■■□□ 2.16
PCGF3-209ENST00000475288 SPATA31D1Q6ZQQ2 1576 aa28.51■■■□□ 2.15
PCGF3-209ENST00000475288 ILDR2Q71H61 639 aa28.51■■■□□ 2.15
PCGF3-209ENST00000475288 TNRQ92752 1358 aa28.5■■■□□ 2.15
PCGF3-209ENST00000475288 POLR1AO95602 1720 aaPredicted RBP28.49■■■□□ 2.15
PCGF3-209ENST00000475288 LRRC9Q6ZRR7 1453 aa28.46■■■□□ 2.15
PCGF3-209ENST00000475288 MAST1Q9Y2H9 1570 aa28.45■■■□□ 2.15
PCGF3-209ENST00000475288 NEURL4Q96JN8 1562 aa28.45■■■□□ 2.14
PCGF3-209ENST00000475288 WASHC2CQ9Y4E1 1318 aa28.44■■■□□ 2.14
PCGF3-209ENST00000475288 VPS8Q8N3P4 1428 aa28.44■■■□□ 2.14
PCGF3-209ENST00000475288 TSPY4P0CV99 314 aa28.44■■■□□ 2.14
PCGF3-209ENST00000475288 TSPY10P0CW01 314 aa28.44■■■□□ 2.14
PCGF3-209ENST00000475288 NLRP1Q9C000 1473 aa28.44■■■□□ 2.14
PCGF3-209ENST00000475288 RNF17Q9BXT8 1623 aaKnown RBP28.43■■■□□ 2.14
PCGF3-209ENST00000475288 FBXO31Q5XUX0 539 aaPredicted RBP28.43■■■□□ 2.14
PCGF3-209ENST00000475288 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
PCGF3-209ENST00000475288 UBAP1LF5GYI3 381 aa28.41■■■□□ 2.14
PCGF3-209ENST00000475288 SOCS7O14512 581 aa28.41■■■□□ 2.14
PCGF3-209ENST00000475288 MIA2Q96PC5 1412 aa28.41■■■□□ 2.14
PCGF3-209ENST00000475288 CPS1P31327 1500 aa28.4■■■□□ 2.14
PCGF3-209ENST00000475288 ZC3H13Q5T200 1668 aaKnown RBP28.4■■■□□ 2.14
PCGF3-209ENST00000475288 EIF2AK4Q9P2K8 1649 aaKnown RBP28.39■■■□□ 2.13
PCGF3-209ENST00000475288 DEPDC5O75140 1603 aa28.38■■■□□ 2.13
PCGF3-209ENST00000475288 THEMISQ8N1K5 641 aaPredicted RBP28.36■■■□□ 2.13
PCGF3-209ENST00000475288 UGGT1Q9NYU2 1555 aa28.36■■■□□ 2.13
PCGF3-209ENST00000475288 MED14O60244 1454 aa28.35■■■□□ 2.13
PCGF3-209ENST00000475288 SHANK2Q9UPX8 1470 aa28.34■■■□□ 2.13
PCGF3-209ENST00000475288 ABCC3O15438 1527 aa28.34■■■□□ 2.13
PCGF3-209ENST00000475288 ANKLE2Q86XL3 938 aa28.34■■■□□ 2.13
PCGF3-209ENST00000475288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.32■■■□□ 2.126e-7■■■■■ 79.2
PCGF3-209ENST00000475288 VWDEQ8N2E2 1590 aa28.3■■■□□ 2.12
PCGF3-209ENST00000475288 MYOM3Q5VTT5 1437 aa28.3■■■□□ 2.12
PCGF3-209ENST00000475288 MROH1Q8NDA8 1641 aa28.29■■■□□ 2.12
PCGF3-209ENST00000475288 NPHP4O75161 1426 aaPredicted RBP28.27■■■□□ 2.12
PCGF3-209ENST00000475288 ERVK-7P63135 1459 aa28.26■■■□□ 2.11
PCGF3-209ENST00000475288 DUOX2Q9NRD8 1548 aa28.25■■■□□ 2.11
PCGF3-209ENST00000475288 IQGAP1P46940 1657 aa28.25■■■□□ 2.11
PCGF3-209ENST00000475288 KANK4Q5T7N3 995 aaPredicted RBP28.24■■■□□ 2.11
PCGF3-209ENST00000475288 TOM1O60784 492 aa28.22■■■□□ 2.11
PCGF3-209ENST00000475288 CEP152O94986 1710 aa28.19■■■□□ 2.1
PCGF3-209ENST00000475288 LOC105371045A0A1W2PR82 267 aa28.19■■■□□ 2.1
PCGF3-209ENST00000475288 PRDM15P57071 1507 aaPredicted RBP28.18■■■□□ 2.1
PCGF3-209ENST00000475288 CROCC2H7BZ55 1655 aa28.17■■■□□ 2.1
PCGF3-209ENST00000475288 UBR1Q8IWV7 1749 aa28.17■■■□□ 2.1
PCGF3-209ENST00000475288 ARHGAP31Q2M1Z3 1444 aa28.17■■■□□ 2.1
PCGF3-209ENST00000475288 ERBINQ96RT1 1412 aa28.16■■■□□ 2.1
PCGF3-209ENST00000475288 SYNMO15061 1565 aa28.14■■■□□ 2.1
PCGF3-209ENST00000475288 HSPA1LP34931 641 aa28.13■■■□□ 2.09
PCGF3-209ENST00000475288 ALKQ9UM73 1620 aa28.13■■■□□ 2.09
PCGF3-209ENST00000475288 KIF15Q9NS87 1388 aa28.12■■■□□ 2.09
PCGF3-209ENST00000475288 ABCC5O15440 1437 aa28.12■■■□□ 2.09
PCGF3-209ENST00000475288 STRCP1A6NGW2 1772 aa28.11■■■□□ 2.09
PCGF3-209ENST00000475288 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
PCGF3-209ENST00000475288 ARHGAP23Q9P227 1491 aa28.1■■■□□ 2.09
PCGF3-209ENST00000475288 SLIT1O75093 1534 aa28.1■■■□□ 2.09
PCGF3-209ENST00000475288 PIP4K2BP78356 416 aa28.1■■■□□ 2.09
PCGF3-209ENST00000475288 SCAF11Q99590 1463 aaKnown RBP28.09■■■□□ 2.09
PCGF3-209ENST00000475288 SCAF1Q9H7N4 1312 aaKnown RBP28.09■■■□□ 2.09
PCGF3-209ENST00000475288 LRRC7Q96NW7 1537 aa28.08■■■□□ 2.09
PCGF3-209ENST00000475288 MED1Q15648 1581 aaPredicted RBP28.08■■■□□ 2.09
PCGF3-209ENST00000475288 DAPK1P53355 1430 aa28.05■■■□□ 2.08
PCGF3-209ENST00000475288 CFAP65Q6ZU64 1925 aaKnown RBP28.04■■■□□ 2.08
PCGF3-209ENST00000475288 KDM5AP29375 1690 aaKnown RBP28.03■■■□□ 2.08
PCGF3-209ENST00000475288 FGD6Q6ZV73 1430 aa28.02■■■□□ 2.08
PCGF3-209ENST00000475288 LMTK2Q8IWU2 1503 aa28.02■■■□□ 2.08
PCGF3-209ENST00000475288 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
PCGF3-209ENST00000475288 KANK1Q14678 1352 aa27.99■■■□□ 2.07
PCGF3-209ENST00000475288 APLP2Q06481 763 aa27.99■■■□□ 2.07
PCGF3-209ENST00000475288 LTKP29376 864 aa27.98■■■□□ 2.07
PCGF3-209ENST00000475288 PIK3C2BO00750 1634 aa27.98■■■□□ 2.07
PCGF3-209ENST00000475288 TXNDC2Q86VQ3 553 aa27.97■■■□□ 2.07
PCGF3-209ENST00000475288 ANKRD30AQ9BXX3 1397 aa27.96■■■□□ 2.07
PCGF3-209ENST00000475288 TMEM2Q9UHN6 1383 aa27.95■■■□□ 2.06
PCGF3-209ENST00000475288 EID1Q9Y6B2 187 aa27.94■■■□□ 2.06
PCGF3-209ENST00000475288 EFCAB6Q5THR3 1501 aa27.92■■■□□ 2.06
PCGF3-209ENST00000475288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.91■■■□□ 2.06
PCGF3-209ENST00000475288 ADGRL2O95490 1459 aa27.9■■■□□ 2.06
PCGF3-209ENST00000475288 XIRP1Q702N8 1843 aaKnown RBP27.9■■■□□ 2.06
PCGF3-209ENST00000475288 NOS1P29475 1434 aa27.88■■■□□ 2.05
PCGF3-209ENST00000475288 IDI1Q13907 227 aa27.85■■■□□ 2.05
PCGF3-209ENST00000475288 STAG3Q9UJ98 1225 aa27.84■■■□□ 2.05
PCGF3-209ENST00000475288 TET3O43151 1660 aa27.84■■■□□ 2.05
PCGF3-209ENST00000475288 ADGRB3O60242 1522 aa27.83■■■□□ 2.05
PCGF3-209ENST00000475288 RPRD2Q5VT52 1461 aaKnown RBP27.82■■■□□ 2.04
PCGF3-209ENST00000475288 CHIC2Q9UKJ5 165 aa27.81■■■□□ 2.04
PCGF3-209ENST00000475288 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
PCGF3-209ENST00000475288 SLC52A1Q9NWF4 448 aa27.8■■■□□ 2.04
PCGF3-209ENST00000475288 FAM135BQ49AJ0 1406 aa27.78■■■□□ 2.04
PCGF3-209ENST00000475288 KCNA6P17658 529 aa27.77■■■□□ 2.04
PCGF3-209ENST00000475288 NWD1Q149M9 1564 aa27.76■■■□□ 2.03
PCGF3-209ENST00000475288 NKTRP30414 1462 aaKnown RBP27.76■■■□□ 2.03
PCGF3-209ENST00000475288 ANKRD50Q9ULJ7 1429 aa27.75■■■□□ 2.03
PCGF3-209ENST00000475288 TMEM94Q12767 1356 aa27.74■■■□□ 2.03
PCGF3-209ENST00000475288 ZFYVE9O95405 1425 aa27.69■■■□□ 2.02
PCGF3-209ENST00000475288 SLC26A8Q96RN1 970 aa27.68■■■□□ 2.02
PCGF3-209ENST00000475288 UNC13BO14795 1591 aa27.68■■■□□ 2.02
PCGF3-209ENST00000475288 GCC2Q8IWJ2 1684 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms