RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 ZNF335Q9H4Z2 1342 aaPredicted RBP22.83■■□□□ 1.25
COL2A1-205ENST00000474996 KDM5DQ9BY66 1539 aa22.83■■□□□ 1.25
COL2A1-205ENST00000474996 A2ML1A8K2U0 1454 aa22.83■■□□□ 1.25
COL2A1-205ENST00000474996 DNMT1P26358 1616 aaKnown RBP22.82■■□□□ 1.24
COL2A1-205ENST00000474996 FBXO31Q5XUX0 539 aaPredicted RBP22.82■■□□□ 1.24
COL2A1-205ENST00000474996 TSPY4P0CV99 314 aa22.81■■□□□ 1.24
COL2A1-205ENST00000474996 TSPY10P0CW01 314 aa22.81■■□□□ 1.24
COL2A1-205ENST00000474996 FAM135AQ9P2D6 1515 aa22.81■■□□□ 1.24
COL2A1-205ENST00000474996 PZPP20742 1482 aa22.8■■□□□ 1.24
COL2A1-205ENST00000474996 WASHC2CQ9Y4E1 1318 aa22.8■■□□□ 1.24
COL2A1-205ENST00000474996 TNRQ92752 1358 aa22.79■■□□□ 1.24
COL2A1-205ENST00000474996 KANK4Q5T7N3 995 aaPredicted RBP22.78■■□□□ 1.24
COL2A1-205ENST00000474996 MAP3K1Q13233 1512 aa22.76■■□□□ 1.23
COL2A1-205ENST00000474996 MAST1Q9Y2H9 1570 aa22.76■■□□□ 1.23
COL2A1-205ENST00000474996 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
COL2A1-205ENST00000474996 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
COL2A1-205ENST00000474996 RNF17Q9BXT8 1623 aaKnown RBP22.72■■□□□ 1.23
COL2A1-205ENST00000474996 MYOM3Q5VTT5 1437 aa22.72■■□□□ 1.23
COL2A1-205ENST00000474996 MIA2Q96PC5 1412 aa22.71■■□□□ 1.23
COL2A1-205ENST00000474996 NEURL4Q96JN8 1562 aa22.71■■□□□ 1.23
COL2A1-205ENST00000474996 UBAP1LF5GYI3 381 aa22.69■■□□□ 1.22
COL2A1-205ENST00000474996 EIF2AK4Q9P2K8 1649 aaKnown RBP22.68■■□□□ 1.22
COL2A1-205ENST00000474996 NLRP1Q9C000 1473 aa22.68■■□□□ 1.22
COL2A1-205ENST00000474996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.68■■□□□ 1.22
COL2A1-205ENST00000474996 ZC3H13Q5T200 1668 aaKnown RBP22.68■■□□□ 1.22
COL2A1-205ENST00000474996 ABCC3O15438 1527 aa22.67■■□□□ 1.22
COL2A1-205ENST00000474996 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
COL2A1-205ENST00000474996 MROH1Q8NDA8 1641 aa22.65■■□□□ 1.22
COL2A1-205ENST00000474996 SPATA31D1Q6ZQQ2 1576 aa22.65■■□□□ 1.22
COL2A1-205ENST00000474996 THEMISQ8N1K5 641 aaPredicted RBP22.65■■□□□ 1.22
COL2A1-205ENST00000474996 ILDR2Q71H61 639 aa22.64■■□□□ 1.21
COL2A1-205ENST00000474996 ANKLE2Q86XL3 938 aa22.64■■□□□ 1.21
COL2A1-205ENST00000474996 CEP152O94986 1710 aa22.63■■□□□ 1.21
COL2A1-205ENST00000474996 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
COL2A1-205ENST00000474996 CFAP65Q6ZU64 1925 aaKnown RBP22.61■■□□□ 1.21
COL2A1-205ENST00000474996 DEPDC5O75140 1603 aa22.6■■□□□ 1.21
COL2A1-205ENST00000474996 ERVK-7P63135 1459 aa22.6■■□□□ 1.21
COL2A1-205ENST00000474996 SHANK2Q9UPX8 1470 aa22.6■■□□□ 1.21
COL2A1-205ENST00000474996 CROCC2H7BZ55 1655 aa22.6■■□□□ 1.21
COL2A1-205ENST00000474996 CPS1P31327 1500 aa22.6■■□□□ 1.21
COL2A1-205ENST00000474996 NPHP4O75161 1426 aaPredicted RBP22.59■■□□□ 1.21
COL2A1-205ENST00000474996 PTPN23Q9H3S7 1636 aa22.58■■□□□ 1.21
COL2A1-205ENST00000474996 MED14O60244 1454 aa22.58■■□□□ 1.2
COL2A1-205ENST00000474996 VWDEQ8N2E2 1590 aa22.58■■□□□ 1.2
COL2A1-205ENST00000474996 ABCC5O15440 1437 aa22.57■■□□□ 1.2
COL2A1-205ENST00000474996 APLP2Q06481 763 aa22.57■■□□□ 1.2
COL2A1-205ENST00000474996 KIF15Q9NS87 1388 aa22.57■■□□□ 1.2
COL2A1-205ENST00000474996 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
COL2A1-205ENST00000474996 RRP7BPQ9NSQ0 103 aa22.54■■□□□ 1.2
COL2A1-205ENST00000474996 PRDM15P57071 1507 aaPredicted RBP22.53■■□□□ 1.2
COL2A1-205ENST00000474996 ERBINQ96RT1 1412 aa22.53■■□□□ 1.2
COL2A1-205ENST00000474996 UBR1Q8IWV7 1749 aa22.52■■□□□ 1.2
COL2A1-205ENST00000474996 DAPK1P53355 1430 aa22.52■■□□□ 1.2
COL2A1-205ENST00000474996 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
COL2A1-205ENST00000474996 PIP4K2BP78356 416 aa22.51■■□□□ 1.19
COL2A1-205ENST00000474996 FGD6Q6ZV73 1430 aa22.5■■□□□ 1.19
COL2A1-205ENST00000474996 TOM1O60784 492 aa22.5■■□□□ 1.19
COL2A1-205ENST00000474996 ARHGAP31Q2M1Z3 1444 aa22.48■■□□□ 1.19
COL2A1-205ENST00000474996 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
COL2A1-205ENST00000474996 SOCS7O14512 581 aa22.48■■□□□ 1.19
COL2A1-205ENST00000474996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.193e-6■□□□□ 11.3
COL2A1-205ENST00000474996 HSPA1LP34931 641 aa22.46■■□□□ 1.19
COL2A1-205ENST00000474996 CHIC2Q9UKJ5 165 aa22.45■■□□□ 1.18
COL2A1-205ENST00000474996 SCAF11Q99590 1463 aaKnown RBP22.45■■□□□ 1.18
COL2A1-205ENST00000474996 KANK1Q14678 1352 aa22.43■■□□□ 1.18
COL2A1-205ENST00000474996 ANKRD30AQ9BXX3 1397 aa22.43■■□□□ 1.18
COL2A1-205ENST00000474996 ALKQ9UM73 1620 aa22.42■■□□□ 1.18
COL2A1-205ENST00000474996 SLIT1O75093 1534 aa22.42■■□□□ 1.18
COL2A1-205ENST00000474996 ARHGAP23Q9P227 1491 aa22.42■■□□□ 1.18
COL2A1-205ENST00000474996 PIK3C2BO00750 1634 aa22.42■■□□□ 1.18
COL2A1-205ENST00000474996 LRRC7Q96NW7 1537 aa22.41■■□□□ 1.18
COL2A1-205ENST00000474996 LTKP29376 864 aa22.41■■□□□ 1.18
COL2A1-205ENST00000474996 SYNMO15061 1565 aa22.41■■□□□ 1.18
COL2A1-205ENST00000474996 TXNDC2Q86VQ3 553 aa22.4■■□□□ 1.18
COL2A1-205ENST00000474996 LMTK2Q8IWU2 1503 aa22.38■■□□□ 1.17
COL2A1-205ENST00000474996 EID1Q9Y6B2 187 aa22.36■■□□□ 1.17
COL2A1-205ENST00000474996 MED1Q15648 1581 aaPredicted RBP22.35■■□□□ 1.17
COL2A1-205ENST00000474996 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
COL2A1-205ENST00000474996 ADGRL2O95490 1459 aa22.34■■□□□ 1.17
COL2A1-205ENST00000474996 TMEM2Q9UHN6 1383 aa22.34■■□□□ 1.17
COL2A1-205ENST00000474996 IDI1Q13907 227 aa22.33■■□□□ 1.17
COL2A1-205ENST00000474996 FAM50AQ14320 339 aaKnown RBP22.33■■□□□ 1.17
COL2A1-205ENST00000474996 KDM5AP29375 1690 aaKnown RBP22.33■■□□□ 1.16
COL2A1-205ENST00000474996 EFCAB6Q5THR3 1501 aa22.32■■□□□ 1.16
COL2A1-205ENST00000474996 XIRP1Q702N8 1843 aaKnown RBP22.3■■□□□ 1.16
COL2A1-205ENST00000474996 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
COL2A1-205ENST00000474996 NOS1P29475 1434 aa22.3■■□□□ 1.16
COL2A1-205ENST00000474996 ANKRD50Q9ULJ7 1429 aa22.27■■□□□ 1.16
COL2A1-205ENST00000474996 ADGRB3O60242 1522 aa22.26■■□□□ 1.15
COL2A1-205ENST00000474996 TET3O43151 1660 aa22.23■■□□□ 1.15
COL2A1-205ENST00000474996 RPRD2Q5VT52 1461 aaKnown RBP22.22■■□□□ 1.15
COL2A1-205ENST00000474996 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
COL2A1-205ENST00000474996 SLC52A1Q9NWF4 448 aa22.22■■□□□ 1.15
COL2A1-205ENST00000474996 MYO5BQ9ULV0 1848 aa22.2■■□□□ 1.14
COL2A1-205ENST00000474996 KCNA6P17658 529 aa22.19■■□□□ 1.14
COL2A1-205ENST00000474996 TMEM94Q12767 1356 aa22.19■■□□□ 1.14
COL2A1-205ENST00000474996 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
COL2A1-205ENST00000474996 GCC2Q8IWJ2 1684 aa22.17■■□□□ 1.14
COL2A1-205ENST00000474996 UNC13BO14795 1591 aa22.17■■□□□ 1.14
COL2A1-205ENST00000474996 BCANQ96GW7 911 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms