RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 RGL3Q3MIN7 710 aa21.7■■□□□ 1.06
TPR-205ENST00000474852 CC2D1BQ5T0F9 858 aaKnown RBP21.7■■□□□ 1.06
TPR-205ENST00000474852 NLRP13Q86W25 1043 aa21.7■■□□□ 1.06
TPR-205ENST00000474852 CROCC2H7BZ55 1655 aa21.69■■□□□ 1.06
TPR-205ENST00000474852 IL27Q8NEV9 243 aa21.68■■□□□ 1.06
TPR-205ENST00000474852 RTN4Q9NQC3 1192 aaKnown RBP21.68■■□□□ 1.06
TPR-205ENST00000474852 TSPY4P0CV99 314 aa21.68■■□□□ 1.06
TPR-205ENST00000474852 TSPY10P0CW01 314 aa21.68■■□□□ 1.06
TPR-205ENST00000474852 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
TPR-205ENST00000474852 C9orf84Q5VXU9 1444 aa21.67■■□□□ 1.06
TPR-205ENST00000474852 KTN1Q86UP2 1357 aaKnown RBP21.67■■□□□ 1.06
TPR-205ENST00000474852 GRIN2AQ12879 1464 aa21.67■■□□□ 1.06
TPR-205ENST00000474852 NEFMP07197 916 aa21.66■■□□□ 1.06
TPR-205ENST00000474852 HNRNPMP52272 730 aaKnown RBP eCLIP21.66■■□□□ 1.06
TPR-205ENST00000474852 BACH2Q9BYV9 841 aa21.66■■□□□ 1.06
TPR-205ENST00000474852 NBPF1Q3BBV0 1214 aa21.65■■□□□ 1.06
TPR-205ENST00000474852 ARHGEF12Q9NZN5 1544 aa21.64■■□□□ 1.06
TPR-205ENST00000474852 PLEKHD1A6NEE1 506 aa21.64■■□□□ 1.05
TPR-205ENST00000474852 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
TPR-205ENST00000474852 PARD3Q8TEW0 1356 aa21.61■■□□□ 1.05
TPR-205ENST00000474852 CRBNQ96SW2 442 aa21.61■■□□□ 1.05
TPR-205ENST00000474852 PDE3BQ13370 1112 aa21.6■■□□□ 1.05
TPR-205ENST00000474852 IFT140Q96RY7 1462 aa21.6■■□□□ 1.05
TPR-205ENST00000474852 E9PCH4 1651 aa21.6■■□□□ 1.05
TPR-205ENST00000474852 CDC42BPAQ5VT25 1732 aa21.59■■□□□ 1.05
TPR-205ENST00000474852 PER1O15534 1290 aaPredicted RBP21.58■■□□□ 1.05
TPR-205ENST00000474852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.57■■□□□ 1.043e-8■■■□□ 18.3
TPR-205ENST00000474852 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
TPR-205ENST00000474852 ADCY10Q96PN6 1610 aa21.57■■□□□ 1.04
TPR-205ENST00000474852 MS4A1P11836 297 aa21.56■■□□□ 1.04
TPR-205ENST00000474852 C20orf194Q5TEA3 1177 aa21.55■■□□□ 1.04
TPR-205ENST00000474852 PANK3Q9H999 370 aa21.55■■□□□ 1.04
TPR-205ENST00000474852 JPH4Q96JJ6 628 aa21.55■■□□□ 1.04
TPR-205ENST00000474852 DISP3Q9P2K9 1392 aa21.54■■□□□ 1.04
TPR-205ENST00000474852 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.53■■□□□ 1.04
TPR-205ENST00000474852 CCDC144AA2RUR9 1427 aa21.53■■□□□ 1.04
TPR-205ENST00000474852 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
TPR-205ENST00000474852 PRAG1Q86YV5 1406 aa21.53■■□□□ 1.04
TPR-205ENST00000474852 SLC4A3P48751 1232 aa21.52■■□□□ 1.04
TPR-205ENST00000474852 KDM5DQ9BY66 1539 aa21.52■■□□□ 1.04
TPR-205ENST00000474852 MAGI1Q96QZ7 1491 aaPredicted RBP21.51■■□□□ 1.03
TPR-205ENST00000474852 SHANK2Q9UPX8 1470 aa21.51■■□□□ 1.03
TPR-205ENST00000474852 CARMIL2Q6F5E8 1435 aa21.51■■□□□ 1.03
TPR-205ENST00000474852 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
TPR-205ENST00000474852 FAM135AQ9P2D6 1515 aa21.48■■□□□ 1.03
TPR-205ENST00000474852 PTPRGP23470 1445 aa21.48■■□□□ 1.03
TPR-205ENST00000474852 TESK2Q96S53 571 aa21.48■■□□□ 1.03
TPR-205ENST00000474852 TRPM1Q7Z4N2 1603 aa21.48■■□□□ 1.03
TPR-205ENST00000474852 ADAMTS8Q9UP79 889 aa21.48■■□□□ 1.03
TPR-205ENST00000474852 ATP10BO94823 1461 aa21.47■■□□□ 1.03
TPR-205ENST00000474852 PPM1GO15355 546 aaPredicted RBP21.47■■□□□ 1.03
TPR-205ENST00000474852 USP35Q9P2H5 1018 aa21.45■■□□□ 1.02
TPR-205ENST00000474852 BLMP54132 1417 aaPredicted RBP21.44■■□□□ 1.02
TPR-205ENST00000474852 COL17A1Q9UMD9 1497 aaPredicted RBP21.44■■□□□ 1.02
TPR-205ENST00000474852 A2MP01023 1474 aa21.43■■□□□ 1.02
TPR-205ENST00000474852 TMF1P82094 1093 aa21.42■■□□□ 1.02
TPR-205ENST00000474852 DDRGK1Q96HY6 314 aa21.42■■□□□ 1.02
TPR-205ENST00000474852 ERBINQ96RT1 1412 aa21.42■■□□□ 1.02
TPR-205ENST00000474852 SYNJ2O15056 1496 aa21.4■■□□□ 1.02
TPR-205ENST00000474852 DAXXQ9UER7 740 aaPredicted RBP21.4■■□□□ 1.02
TPR-205ENST00000474852 PLA2R1Q13018 1463 aa21.4■■□□□ 1.02
TPR-205ENST00000474852 ABCA8O94911 1581 aa21.39■■□□□ 1.02
TPR-205ENST00000474852 WDR43Q15061 677 aaKnown RBP eCLIP21.39■■□□□ 1.01
TPR-205ENST00000474852 WASHC2CQ9Y4E1 1318 aa21.39■■□□□ 1.01
TPR-205ENST00000474852 CCDC141Q6ZP82 1450 aa21.38■■□□□ 1.01
TPR-205ENST00000474852 RGS3P49796 1198 aa21.38■■□□□ 1.01
TPR-205ENST00000474852 GPRASP1Q5JY77 1395 aa21.37■■□□□ 1.01
TPR-205ENST00000474852 PLEKHH1Q9ULM0 1364 aa21.37■■□□□ 1.01
TPR-205ENST00000474852 ZMYM4Q5VZL5 1548 aa21.37■■□□□ 1.01
TPR-205ENST00000474852 NFKBIBQ15653 356 aa21.37■■□□□ 1.01
TPR-205ENST00000474852 KDM2BQ8NHM5 1336 aa21.36■■□□□ 1.01
TPR-205ENST00000474852 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
TPR-205ENST00000474852 KNSTRNQ9Y448 316 aa21.35■■□□□ 1.01
TPR-205ENST00000474852 SAMD9LQ8IVG5 1584 aa21.35■■□□□ 1.01
TPR-205ENST00000474852 PRDM15P57071 1507 aaPredicted RBP21.34■■□□□ 1.01
TPR-205ENST00000474852 ARHGEF5Q12774 1597 aa21.34■■□□□ 1.01
TPR-205ENST00000474852 CENPQQ7L2Z9 268 aaPredicted RBP21.34■■□□□ 1.01
TPR-205ENST00000474852 BRPF3Q9ULD4 1205 aa21.34■■□□□ 1.01
TPR-205ENST00000474852 PPP2R1AP30153 589 aa21.33■■□□□ 1.01
TPR-205ENST00000474852 CCDC146Q8IYE0 955 aa21.33■■□□□ 1.01
TPR-205ENST00000474852 GSE1Q14687 1217 aa21.31■■□□□ 1
TPR-205ENST00000474852 PLEKHH2Q8IVE3 1493 aa21.31■■□□□ 1
TPR-205ENST00000474852 SYCP2Q9BX26 1530 aa21.31■■□□□ 1
TPR-205ENST00000474852 GOLGA2Q08379 1002 aa21.31■■□□□ 1
TPR-205ENST00000474852 FAM161AQ3B820 660 aa21.31■■□□□ 1
TPR-205ENST00000474852 C8orf34Q49A92 452 aa21.31■■□□□ 1
TPR-205ENST00000474852 NUP160Q12769 1436 aa21.3■■□□□ 1
TPR-205ENST00000474852 MYO5CQ9NQX4 1742 aa21.3■■□□□ 1
TPR-205ENST00000474852 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
TPR-205ENST00000474852 CDC42BPBQ9Y5S2 1711 aa21.29■■□□□ 1
TPR-205ENST00000474852 ERCC6Q03468 1493 aa21.28■■□□□ 1
TPR-205ENST00000474852 FRAT1Q92837 279 aaPredicted RBP21.27■■□□□ 1
TPR-205ENST00000474852 INSRP06213 1382 aa21.27■■□□□ 1
TPR-205ENST00000474852 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.26■□□□□ 0.99
TPR-205ENST00000474852 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
TPR-205ENST00000474852 RSPH4AQ5TD94 716 aa21.25■□□□□ 0.99
TPR-205ENST00000474852 ARHGAP5Q13017 1502 aa21.25■□□□□ 0.99
TPR-205ENST00000474852 AMER1Q5JTC6 1135 aaPredicted RBP21.25■□□□□ 0.99
TPR-205ENST00000474852 BCAR3O75815 825 aa21.24■□□□□ 0.99
TPR-205ENST00000474852 WDR7Q9Y4E6 1490 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms