RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 HSPA2P54652 639 aa9.6□□□□□ -0.87
CPSF7-210ENST00000474684 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-210ENST00000474684 FOXD4L1Q9NU39 408 aa9.6□□□□□ -0.87
CPSF7-210ENST00000474684 ZNF142P52746 1687 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-210ENST00000474684 CAMSAP2Q08AD1 1489 aa9.59□□□□□ -0.87
CPSF7-210ENST00000474684 EVX2Q03828 476 aa9.59□□□□□ -0.87
CPSF7-210ENST00000474684 CCNB3Q8WWL7 1395 aa9.59□□□□□ -0.87
CPSF7-210ENST00000474684 PLEKHH2Q8IVE3 1493 aa9.59□□□□□ -0.87
CPSF7-210ENST00000474684 VPS8Q8N3P4 1428 aa9.58□□□□□ -0.88
CPSF7-210ENST00000474684 CEBPAP49715 358 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-210ENST00000474684 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-210ENST00000474684 MBD5Q9P267 1494 aa9.58□□□□□ -0.88
CPSF7-210ENST00000474684 CROCC2H7BZ55 1655 aa9.58□□□□□ -0.88
CPSF7-210ENST00000474684 KIAA1107Q9UPP5 1409 aa9.57□□□□□ -0.88
CPSF7-210ENST00000474684 ZNF644Q9H582 1327 aaPredicted RBP9.56□□□□□ -0.88
CPSF7-210ENST00000474684 ARHGEF5Q12774 1597 aa9.56□□□□□ -0.88
CPSF7-210ENST00000474684 A2MP01023 1474 aa9.56□□□□□ -0.88
CPSF7-210ENST00000474684 SPDYE2BA6NHP3 402 aa9.56□□□□□ -0.88
CPSF7-210ENST00000474684 SPDYE6P0CI01 402 aa9.56□□□□□ -0.88
CPSF7-210ENST00000474684 SPDYE2Q495Y8 402 aa9.56□□□□□ -0.88
CPSF7-210ENST00000474684 MYT1LQ9UL68 1186 aa9.56□□□□□ -0.88
CPSF7-210ENST00000474684 CCDC141Q6ZP82 1450 aa9.55□□□□□ -0.88
CPSF7-210ENST00000474684 LRRC9Q6ZRR7 1453 aa9.55□□□□□ -0.88
CPSF7-210ENST00000474684 HNRNPMP52272 730 aaKnown RBP eCLIP9.55□□□□□ -0.88
CPSF7-210ENST00000474684 CEP152O94986 1710 aa9.54□□□□□ -0.88
CPSF7-210ENST00000474684 LOC105371045A0A1W2PR82 267 aa9.54□□□□□ -0.88
CPSF7-210ENST00000474684 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
CPSF7-210ENST00000474684 UHRF1BP1Q6BDS2 1440 aa9.54□□□□□ -0.88
CPSF7-210ENST00000474684 CFAP65Q6ZU64 1925 aaKnown RBP9.54□□□□□ -0.88
CPSF7-210ENST00000474684 SPAG9O60271 1321 aaKnown RBP9.54□□□□□ -0.88
CPSF7-210ENST00000474684 MAST1Q9Y2H9 1570 aa9.53□□□□□ -0.88
CPSF7-210ENST00000474684 CEP170BQ9Y4F5 1589 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-210ENST00000474684 POLR1AO95602 1720 aaPredicted RBP9.53□□□□□ -0.88
CPSF7-210ENST00000474684 RNF17Q9BXT8 1623 aaKnown RBP9.53□□□□□ -0.88
CPSF7-210ENST00000474684 MROH1Q8NDA8 1641 aa9.52□□□□□ -0.89
CPSF7-210ENST00000474684 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
CPSF7-210ENST00000474684 CNTLNQ9NXG0 1405 aa9.51□□□□□ -0.89
CPSF7-210ENST00000474684 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
CPSF7-210ENST00000474684 LHX8Q68G74 356 aa9.51□□□□□ -0.89
CPSF7-210ENST00000474684 CAMSAP1Q5T5Y3 1602 aa9.51□□□□□ -0.89
CPSF7-210ENST00000474684 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
CPSF7-210ENST00000474684 SPDYE1Q8NFV5 336 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-210ENST00000474684 EIF2AK4Q9P2K8 1649 aaKnown RBP9.49□□□□□ -0.89
CPSF7-210ENST00000474684 ZC3H13Q5T200 1668 aaKnown RBP9.49□□□□□ -0.89
CPSF7-210ENST00000474684 KDM5DQ9BY66 1539 aa9.49□□□□□ -0.89
CPSF7-210ENST00000474684 PTPN23Q9H3S7 1636 aa9.49□□□□□ -0.89
CPSF7-210ENST00000474684 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
CPSF7-210ENST00000474684 NPATQ14207 1427 aa9.48□□□□□ -0.89
CPSF7-210ENST00000474684 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
CPSF7-210ENST00000474684 NCOA1Q15788 1441 aa9.48□□□□□ -0.89
CPSF7-210ENST00000474684 DNMT1P26358 1616 aaKnown RBP9.48□□□□□ -0.89
CPSF7-210ENST00000474684 MYOM3Q5VTT5 1437 aa9.48□□□□□ -0.89
CPSF7-210ENST00000474684 LTBP4Q8N2S1 1624 aa9.47□□□□□ -0.89
CPSF7-210ENST00000474684 KANK4Q5T7N3 995 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-210ENST00000474684 FAM135AQ9P2D6 1515 aa9.46□□□□□ -0.89
CPSF7-210ENST00000474684 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.89
CPSF7-210ENST00000474684 ZMYM3Q14202 1370 aa9.46□□□□□ -0.9
CPSF7-210ENST00000474684 DEPDC5O75140 1603 aa9.45□□□□□ -0.9
CPSF7-210ENST00000474684 GABBR2O75899 941 aa9.45□□□□□ -0.9
CPSF7-210ENST00000474684 ABCC3O15438 1527 aa9.45□□□□□ -0.9
CPSF7-210ENST00000474684 FBXO41Q8TF61 875 aa9.44□□□□□ -0.9
CPSF7-210ENST00000474684 DHX29Q7Z478 1369 aaKnown RBP9.44□□□□□ -0.9
CPSF7-210ENST00000474684 PZPP20742 1482 aa9.44□□□□□ -0.9
CPSF7-210ENST00000474684 PRDM15P57071 1507 aaPredicted RBP9.43□□□□□ -0.9
CPSF7-210ENST00000474684 PLA2R1Q13018 1463 aa9.43□□□□□ -0.9
CPSF7-210ENST00000474684 TCOF1Q13428 1488 aaKnown RBP9.43□□□□□ -0.9
CPSF7-210ENST00000474684 SHANK2Q9UPX8 1470 aa9.43□□□□□ -0.9
CPSF7-210ENST00000474684 PTPRTO14522 1441 aa9.43□□□□□ -0.9
CPSF7-210ENST00000474684 ATXN8OSP0DMR3 200 aa9.43□□□□□ -0.9
CPSF7-210ENST00000474684 GGT6Q6P531 493 aa9.43□□□□□ -0.9
CPSF7-210ENST00000474684 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
CPSF7-210ENST00000474684 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
CPSF7-210ENST00000474684 A2ML1A8K2U0 1454 aa9.42□□□□□ -0.9
CPSF7-210ENST00000474684 MIA2Q96PC5 1412 aa9.42□□□□□ -0.9
CPSF7-210ENST00000474684 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
CPSF7-210ENST00000474684 STRCP1A6NGW2 1772 aa9.42□□□□□ -0.9
CPSF7-210ENST00000474684 UBR1Q8IWV7 1749 aa9.42□□□□□ -0.9
CPSF7-210ENST00000474684 SPATA31D1Q6ZQQ2 1576 aa9.41□□□□□ -0.9
CPSF7-210ENST00000474684 DUOX2Q9NRD8 1548 aa9.41□□□□□ -0.9
CPSF7-210ENST00000474684 FGD6Q6ZV73 1430 aa9.4□□□□□ -0.9
CPSF7-210ENST00000474684 MYO5BQ9ULV0 1848 aa9.4□□□□□ -0.9
CPSF7-210ENST00000474684 CERKQ8TCT0 537 aa9.4□□□□□ -0.9
CPSF7-210ENST00000474684 ABCC5O15440 1437 aa9.39□□□□□ -0.91
CPSF7-210ENST00000474684 IQGAP1P46940 1657 aa9.39□□□□□ -0.91
CPSF7-210ENST00000474684 KIF3BO15066 747 aa9.39□□□□□ -0.91
CPSF7-210ENST00000474684 DAPK1P53355 1430 aa9.39□□□□□ -0.91
CPSF7-210ENST00000474684 TNRQ92752 1358 aa9.38□□□□□ -0.91
CPSF7-210ENST00000474684 ERVK-7P63135 1459 aa9.38□□□□□ -0.91
CPSF7-210ENST00000474684 PIK3C2BO00750 1634 aa9.38□□□□□ -0.91
CPSF7-210ENST00000474684 CLCN6P51797 869 aa9.37□□□□□ -0.91
CPSF7-210ENST00000474684 FBXO31Q5XUX0 539 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-210ENST00000474684 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
CPSF7-210ENST00000474684 UGGT1Q9NYU2 1555 aa9.37□□□□□ -0.91
CPSF7-210ENST00000474684 NCKAP5LQ9HCH0 1330 aa9.36□□□□□ -0.91
CPSF7-210ENST00000474684 XIRP1Q702N8 1843 aaKnown RBP9.36□□□□□ -0.91
CPSF7-210ENST00000474684 ERBINQ96RT1 1412 aa9.36□□□□□ -0.91
CPSF7-210ENST00000474684 KIF15Q9NS87 1388 aa9.36□□□□□ -0.91
CPSF7-210ENST00000474684 NLRP1Q9C000 1473 aa9.35□□□□□ -0.91
CPSF7-210ENST00000474684 SYNMO15061 1565 aa9.35□□□□□ -0.91
CPSF7-210ENST00000474684 IQSEC2Q5JU85 1478 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms