RNA–Protein interactions for RNA: ENST00000474414.5

BSDC1-208, Transcript of BSD domain containing 1, human

TSL 5

Gene BSDC1, Length 978 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BSDC1-208	ENST00000474414	PKD2	Q13563	968 aa		34.16	■■■■□ 3.06
BSDC1-208	ENST00000474414	FAM135A	Q9P2D6	1515 aa		34.14	■■■■□ 3.06
BSDC1-208	ENST00000474414	KANK4	Q5T7N3	995 aa	Predicted RBP	34.13	■■■■□ 3.05
BSDC1-208	ENST00000474414	TCOF1	Q13428	1488 aa	Known RBP	34.11	■■■■□ 3.05
BSDC1-208	ENST00000474414	KDM5D	Q9BY66	1539 aa		34.1	■■■■□ 3.05
BSDC1-208	ENST00000474414	WASHC2C	Q9Y4E1	1318 aa		34.1	■■■■□ 3.05
BSDC1-208	ENST00000474414	A2ML1	A8K2U0	1454 aa		34.1	■■■■□ 3.05
BSDC1-208	ENST00000474414	FBXO31	Q5XUX0	539 aa	Predicted RBP	34.08	■■■■□ 3.05
BSDC1-208	ENST00000474414	PZP	P20742	1482 aa		34.07	■■■■□ 3.05
BSDC1-208	ENST00000474414	IQSEC2	Q5JU85	1478 aa		34.07	■■■■□ 3.05
BSDC1-208	ENST00000474414	TNR	Q92752	1358 aa		34.07	■■■■□ 3.04
BSDC1-208	ENST00000474414	MIA2	Q96PC5	1412 aa		34.05	■■■■□ 3.04
BSDC1-208	ENST00000474414	MYOM3	Q5VTT5	1437 aa		34.04	■■■■□ 3.04
BSDC1-208	ENST00000474414	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	34.03	■■■■□ 3.04
BSDC1-208	ENST00000474414	MAST1	Q9Y2H9	1570 aa		34.02	■■■■□ 3.04
BSDC1-208	ENST00000474414	DNMT1	P26358	1616 aa	Known RBP	34.02	■■■■□ 3.04
BSDC1-208	ENST00000474414	RNF17	Q9BXT8	1623 aa	Known RBP	33.93	■■■■□ 3.02
BSDC1-208	ENST00000474414	NLRP1	Q9C000	1473 aa		33.91	■■■■□ 3.02
BSDC1-208	ENST00000474414	APLP2	Q06481	763 aa		33.91	■■■■□ 3.02
BSDC1-208	ENST00000474414	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.89	■■■■□ 3.02
BSDC1-208	ENST00000474414	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.89	■■■■□ 3.02
BSDC1-208	ENST00000474414	ABCC3	O15438	1527 aa		33.89	■■■■□ 3.02
BSDC1-208	ENST00000474414	ANKLE2	Q86XL3	938 aa		33.86	■■■■□ 3.01
BSDC1-208	ENST00000474414	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.85	■■■■□ 3.01	6e-6	■□□□□ 11
BSDC1-208	ENST00000474414	DUOX2	Q9NRD8	1548 aa		33.84	■■■■□ 3.01
BSDC1-208	ENST00000474414	ZC3H13	Q5T200	1668 aa	Known RBP	33.84	■■■■□ 3.01
BSDC1-208	ENST00000474414	NEURL4	Q96JN8	1562 aa		33.83	■■■■□ 3.01
BSDC1-208	ENST00000474414	UGGT1	Q9NYU2	1555 aa		33.82	■■■■□ 3
BSDC1-208	ENST00000474414	POLR1A	O95602	1720 aa	Predicted RBP	33.81	■■■■□ 3
BSDC1-208	ENST00000474414	ABCC5	O15440	1437 aa		33.8	■■■■□ 3
BSDC1-208	ENST00000474414	MROH1	Q8NDA8	1641 aa		33.8	■■■■□ 3
BSDC1-208	ENST00000474414	UBAP1L	F5GYI3	381 aa		33.8	■■■■□ 3
BSDC1-208	ENST00000474414	SHANK2	Q9UPX8	1470 aa		33.8	■■■■□ 3
BSDC1-208	ENST00000474414	KIF15	Q9NS87	1388 aa		33.79	■■■■□ 3
BSDC1-208	ENST00000474414	SPATA31D1	Q6ZQQ2	1576 aa		33.79	■■■■□ 3
BSDC1-208	ENST00000474414	ERVK-7	P63135	1459 aa		33.77	■■■■□ 3
BSDC1-208	ENST00000474414	DISP3	Q9P2K9	1392 aa		33.77	■■■■□ 3
BSDC1-208	ENST00000474414	PTPN23	Q9H3S7	1636 aa		33.77	■■■■□ 3
BSDC1-208	ENST00000474414	RRP7BP	Q9NSQ0	103 aa		33.75	■■■□□ 2.99
BSDC1-208	ENST00000474414	ERBIN	Q96RT1	1412 aa		33.74	■■■□□ 2.99
BSDC1-208	ENST00000474414	MED14	O60244	1454 aa		33.74	■■■□□ 2.99
BSDC1-208	ENST00000474414	FGD6	Q6ZV73	1430 aa		33.73	■■■□□ 2.99
BSDC1-208	ENST00000474414	DAPK1	P53355	1430 aa		33.72	■■■□□ 2.99
BSDC1-208	ENST00000474414	CPS1	P31327	1500 aa		33.72	■■■□□ 2.99
BSDC1-208	ENST00000474414	DEPDC5	O75140	1603 aa		33.71	■■■□□ 2.99
BSDC1-208	ENST00000474414	NPHP4	O75161	1426 aa	Predicted RBP	33.71	■■■□□ 2.99
BSDC1-208	ENST00000474414	CROCC2	H7BZ55	1655 aa		33.71	■■■□□ 2.99
BSDC1-208	ENST00000474414	CEP152	O94986	1710 aa		33.68	■■■□□ 2.98
BSDC1-208	ENST00000474414	PRDM15	P57071	1507 aa	Predicted RBP	33.68	■■■□□ 2.98
BSDC1-208	ENST00000474414	ARHGAP31	Q2M1Z3	1444 aa		33.67	■■■□□ 2.98
BSDC1-208	ENST00000474414	VWDE	Q8N2E2	1590 aa		33.64	■■■□□ 2.98
BSDC1-208	ENST00000474414	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.62	■■■□□ 2.97	6e-7	■□□□□ 10.8
BSDC1-208	ENST00000474414	ANKRD30A	Q9BXX3	1397 aa		33.61	■■■□□ 2.97
BSDC1-208	ENST00000474414	CHIC2	Q9UKJ5	165 aa		33.6	■■■□□ 2.97
BSDC1-208	ENST00000474414	KANK1	Q14678	1352 aa		33.6	■■■□□ 2.97
BSDC1-208	ENST00000474414	IQGAP1	P46940	1657 aa		33.59	■■■□□ 2.97
BSDC1-208	ENST00000474414	TOM1	O60784	492 aa		33.59	■■■□□ 2.97
BSDC1-208	ENST00000474414	ILDR2	Q71H61	639 aa		33.59	■■■□□ 2.97
BSDC1-208	ENST00000474414	CFAP65	Q6ZU64	1925 aa	Known RBP	33.59	■■■□□ 2.97
BSDC1-208	ENST00000474414	UBR1	Q8IWV7	1749 aa		33.56	■■■□□ 2.96
BSDC1-208	ENST00000474414	SCAF11	Q99590	1463 aa	Known RBP	33.52	■■■□□ 2.96
BSDC1-208	ENST00000474414	ARHGAP23	Q9P227	1491 aa		33.51	■■■□□ 2.96
BSDC1-208	ENST00000474414	PIP4K2B	P78356	416 aa		33.51	■■■□□ 2.95
BSDC1-208	ENST00000474414	SCAF1	Q9H7N4	1312 aa	Known RBP	33.51	■■■□□ 2.95
BSDC1-208	ENST00000474414	SLIT1	O75093	1534 aa		33.5	■■■□□ 2.95
BSDC1-208	ENST00000474414	LMTK2	Q8IWU2	1503 aa		33.5	■■■□□ 2.95
BSDC1-208	ENST00000474414	LTK	P29376	864 aa		33.49	■■■□□ 2.95
BSDC1-208	ENST00000474414	TXNDC2	Q86VQ3	553 aa		33.49	■■■□□ 2.95
BSDC1-208	ENST00000474414	ADGRL2	O95490	1459 aa		33.48	■■■□□ 2.95
BSDC1-208	ENST00000474414	FAM50A	Q14320	339 aa	Known RBP	33.46	■■■□□ 2.95
BSDC1-208	ENST00000474414	HSPA1L	P34931	641 aa		33.45	■■■□□ 2.95
BSDC1-208	ENST00000474414	EID1	Q9Y6B2	187 aa		33.45	■■■□□ 2.95
BSDC1-208	ENST00000474414	LRRC7	Q96NW7	1537 aa		33.43	■■■□□ 2.94
BSDC1-208	ENST00000474414	STAG3	Q9UJ98	1225 aa		33.42	■■■□□ 2.94
BSDC1-208	ENST00000474414	SOCS7	O14512	581 aa		33.41	■■■□□ 2.94
BSDC1-208	ENST00000474414	TMEM2	Q9UHN6	1383 aa		33.41	■■■□□ 2.94
BSDC1-208	ENST00000474414	PIK3C2B	O00750	1634 aa		33.41	■■■□□ 2.94
BSDC1-208	ENST00000474414	STRCP1	A6NGW2	1772 aa		33.41	■■■□□ 2.94
BSDC1-208	ENST00000474414	IDI1	Q13907	227 aa		33.4	■■■□□ 2.94
BSDC1-208	ENST00000474414	SYNM	O15061	1565 aa		33.38	■■■□□ 2.93
BSDC1-208	ENST00000474414	ALK	Q9UM73	1620 aa		33.37	■■■□□ 2.93
BSDC1-208	ENST00000474414	NOS1	P29475	1434 aa		33.36	■■■□□ 2.93
BSDC1-208	ENST00000474414	ANKRD50	Q9ULJ7	1429 aa		33.36	■■■□□ 2.93
BSDC1-208	ENST00000474414	EFCAB6	Q5THR3	1501 aa		33.36	■■■□□ 2.93
BSDC1-208	ENST00000474414	KDM5A	P29375	1690 aa	Known RBP	33.33	■■■□□ 2.93
BSDC1-208	ENST00000474414	SLC52A1	Q9NWF4	448 aa		33.31	■■■□□ 2.92
BSDC1-208	ENST00000474414	RPRD2	Q5VT52	1461 aa	Known RBP	33.27	■■■□□ 2.92
BSDC1-208	ENST00000474414	ADGRB3	O60242	1522 aa		33.23	■■■□□ 2.91
BSDC1-208	ENST00000474414	MED1	Q15648	1581 aa	Predicted RBP	33.21	■■■□□ 2.91
BSDC1-208	ENST00000474414	TET3	O43151	1660 aa		33.19	■■■□□ 2.9
BSDC1-208	ENST00000474414	ROCK1	Q13464	1354 aa		33.19	■■■□□ 2.9
BSDC1-208	ENST00000474414	KCNA6	P17658	529 aa		33.18	■■■□□ 2.9
BSDC1-208	ENST00000474414	SLC26A8	Q96RN1	970 aa		33.18	■■■□□ 2.9
BSDC1-208	ENST00000474414	UNC13B	O14795	1591 aa		33.14	■■■□□ 2.9
BSDC1-208	ENST00000474414	TMEM94	Q12767	1356 aa		33.12	■■■□□ 2.89
BSDC1-208	ENST00000474414	XIRP1	Q702N8	1843 aa	Known RBP	33.12	■■■□□ 2.89
BSDC1-208	ENST00000474414	SENP3	Q9H4L4	574 aa	Predicted RBP	33.11	■■■□□ 2.89
BSDC1-208	ENST00000474414	ZFYVE9	O95405	1425 aa		33.1	■■■□□ 2.89
BSDC1-208	ENST00000474414	HDGF	P51858	240 aa	Known RBP	33.09	■■■□□ 2.89
BSDC1-208	ENST00000474414	BCAN	Q96GW7	911 aa		33.09	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms