RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 ADGRL2O95490 1459 aa27.93■■■□□ 2.06
EFNA1-204ENST00000474413 PTPRKQ15262 1439 aa27.91■■■□□ 2.06
EFNA1-204ENST00000474413 NPATQ14207 1427 aa27.9■■■□□ 2.06
EFNA1-204ENST00000474413 DEPDC5O75140 1603 aa27.89■■■□□ 2.05
EFNA1-204ENST00000474413 ABCC3O15438 1527 aa27.88■■■□□ 2.05
EFNA1-204ENST00000474413 ERBINQ96RT1 1412 aa27.88■■■□□ 2.05
EFNA1-204ENST00000474413 PRDM15P57071 1507 aaPredicted RBP27.87■■■□□ 2.05
EFNA1-204ENST00000474413 NCOA1Q15788 1441 aa27.87■■■□□ 2.05
EFNA1-204ENST00000474413 HSPA2P54652 639 aa27.87■■■□□ 2.05
EFNA1-204ENST00000474413 ESF1Q9H501 851 aaKnown RBP27.87■■■□□ 2.05
EFNA1-204ENST00000474413 MYO3AQ8NEV4 1616 aa27.87■■■□□ 2.05
EFNA1-204ENST00000474413 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
EFNA1-204ENST00000474413 ZC3H13Q5T200 1668 aaKnown RBP27.86■■■□□ 2.05
EFNA1-204ENST00000474413 FAM50AQ14320 339 aaKnown RBP27.85■■■□□ 2.05
EFNA1-204ENST00000474413 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
EFNA1-204ENST00000474413 SETD1BQ9UPS6 1966 aaKnown RBP27.84■■■□□ 2.05
EFNA1-204ENST00000474413 CEP152O94986 1710 aa27.84■■■□□ 2.05
EFNA1-204ENST00000474413 RRP7BPQ9NSQ0 103 aa27.83■■■□□ 2.05
EFNA1-204ENST00000474413 ZNF142P52746 1687 aaPredicted RBP27.83■■■□□ 2.05
EFNA1-204ENST00000474413 CHIC2Q9UKJ5 165 aa27.82■■■□□ 2.04
EFNA1-204ENST00000474413 PZPP20742 1482 aa27.82■■■□□ 2.04
EFNA1-204ENST00000474413 ANKRD30AQ9BXX3 1397 aa27.81■■■□□ 2.04
EFNA1-204ENST00000474413 STRCQ7RTU9 1775 aa27.79■■■□□ 2.04
EFNA1-204ENST00000474413 CAMSAP1Q5T5Y3 1602 aa27.78■■■□□ 2.04
EFNA1-204ENST00000474413 VWDEQ8N2E2 1590 aa27.77■■■□□ 2.04
EFNA1-204ENST00000474413 RRBP1Q9P2E9 1410 aaKnown RBP27.77■■■□□ 2.04
EFNA1-204ENST00000474413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.76■■■□□ 2.03
EFNA1-204ENST00000474413 CEP170BQ9Y4F5 1589 aaPredicted RBP27.75■■■□□ 2.03
EFNA1-204ENST00000474413 WASHC2CQ9Y4E1 1318 aa27.73■■■□□ 2.03
EFNA1-204ENST00000474413 FBXO31Q5XUX0 539 aaPredicted RBP27.71■■■□□ 2.03
EFNA1-204ENST00000474413 SPATA31D1Q6ZQQ2 1576 aa27.7■■■□□ 2.03
EFNA1-204ENST00000474413 ROCK1Q13464 1354 aa27.69■■■□□ 2.02
EFNA1-204ENST00000474413 LMTK2Q8IWU2 1503 aa27.68■■■□□ 2.02
EFNA1-204ENST00000474413 ANKRD50Q9ULJ7 1429 aa27.67■■■□□ 2.02
EFNA1-204ENST00000474413 ERVK-7P63135 1459 aa27.67■■■□□ 2.02
EFNA1-204ENST00000474413 TNRQ92752 1358 aa27.66■■■□□ 2.02
EFNA1-204ENST00000474413 UNC13BO14795 1591 aa27.65■■■□□ 2.02
EFNA1-204ENST00000474413 A2ML1A8K2U0 1454 aa27.65■■■□□ 2.02
EFNA1-204ENST00000474413 ARHGAP31Q2M1Z3 1444 aa27.63■■■□□ 2.01
EFNA1-204ENST00000474413 EFCAB6Q5THR3 1501 aa27.62■■■□□ 2.01
EFNA1-204ENST00000474413 PLA2R1Q13018 1463 aa27.58■■■□□ 2.01
EFNA1-204ENST00000474413 NLRP1Q9C000 1473 aa27.57■■■□□ 2
EFNA1-204ENST00000474413 ITGAEP38570 1179 aa27.56■■■□□ 2
EFNA1-204ENST00000474413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.56■■■□□ 23e-18■■□□□ 11.6
EFNA1-204ENST00000474413 CFAP65Q6ZU64 1925 aaKnown RBP27.54■■■□□ 2
EFNA1-204ENST00000474413 TET3O43151 1660 aa27.53■■■□□ 2
EFNA1-204ENST00000474413 GCC2Q8IWJ2 1684 aa27.53■■■□□ 2
EFNA1-204ENST00000474413 SYNMO15061 1565 aa27.53■■■□□ 2
EFNA1-204ENST00000474413 IQGAP3Q86VI3 1631 aa27.52■■■□□ 2
EFNA1-204ENST00000474413 KANK1Q14678 1352 aa27.52■■■□□ 2
EFNA1-204ENST00000474413 NEURL4Q96JN8 1562 aa27.52■■■□□ 2
EFNA1-204ENST00000474413 PTPRTO14522 1441 aa27.5■■□□□ 1.99
EFNA1-204ENST00000474413 UGGT1Q9NYU2 1555 aa27.5■■□□□ 1.99
EFNA1-204ENST00000474413 UBR1Q8IWV7 1749 aa27.5■■□□□ 1.99
EFNA1-204ENST00000474413 POLR1AO95602 1720 aaPredicted RBP27.49■■□□□ 1.99
EFNA1-204ENST00000474413 NOS1P29475 1434 aa27.47■■□□□ 1.99
EFNA1-204ENST00000474413 NAIPQ13075 1403 aa27.47■■□□□ 1.99
EFNA1-204ENST00000474413 E9PCH4 1651 aa27.46■■□□□ 1.99
EFNA1-204ENST00000474413 PIK3C2BO00750 1634 aa27.45■■□□□ 1.99
EFNA1-204ENST00000474413 NCKAP5LQ9HCH0 1330 aa27.45■■□□□ 1.99
EFNA1-204ENST00000474413 RPRD2Q5VT52 1461 aaKnown RBP27.43■■□□□ 1.98
EFNA1-204ENST00000474413 HFM1A2PYH4 1435 aa27.41■■□□□ 1.98
EFNA1-204ENST00000474413 LTBP4Q8N2S1 1624 aa27.39■■□□□ 1.98
EFNA1-204ENST00000474413 KDM5AP29375 1690 aaKnown RBP27.38■■□□□ 1.97
EFNA1-204ENST00000474413 ARHGAP23Q9P227 1491 aa27.37■■□□□ 1.97
EFNA1-204ENST00000474413 DMRT2Q9Y5R5 561 aa27.36■■□□□ 1.97
EFNA1-204ENST00000474413 PKD2Q13563 968 aa27.35■■□□□ 1.97
EFNA1-204ENST00000474413 SLIT1O75093 1534 aa27.35■■□□□ 1.97
EFNA1-204ENST00000474413 ADGRB3O60242 1522 aa27.34■■□□□ 1.97
EFNA1-204ENST00000474413 NUP155O75694 1391 aa27.34■■□□□ 1.97
EFNA1-204ENST00000474413 MED14O60244 1454 aa27.33■■□□□ 1.97
EFNA1-204ENST00000474413 THEMISQ8N1K5 641 aaPredicted RBP27.3■■□□□ 1.96
EFNA1-204ENST00000474413 IQGAP1P46940 1657 aa27.3■■□□□ 1.96
EFNA1-204ENST00000474413 IDI1Q13907 227 aa27.28■■□□□ 1.96
EFNA1-204ENST00000474413 MYO5BQ9ULV0 1848 aa27.27■■□□□ 1.96
EFNA1-204ENST00000474413 ILDR1Q86SU0 546 aaPredicted RBP27.26■■□□□ 1.95
EFNA1-204ENST00000474413 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.95
EFNA1-204ENST00000474413 NPHP4O75161 1426 aaPredicted RBP27.25■■□□□ 1.95
EFNA1-204ENST00000474413 SCAF11Q99590 1463 aaKnown RBP27.25■■□□□ 1.95
EFNA1-204ENST00000474413 SPHKAPQ2M3C7 1700 aa27.24■■□□□ 1.95
EFNA1-204ENST00000474413 ZNF335Q9H4Z2 1342 aaPredicted RBP27.24■■□□□ 1.95
EFNA1-204ENST00000474413 CERKQ8TCT0 537 aa27.23■■□□□ 1.95
EFNA1-204ENST00000474413 TMEM2Q9UHN6 1383 aa27.22■■□□□ 1.95
EFNA1-204ENST00000474413 ANKLE2Q86XL3 938 aa27.22■■□□□ 1.95
EFNA1-204ENST00000474413 LTKP29376 864 aa27.21■■□□□ 1.95
EFNA1-204ENST00000474413 STRCP1A6NGW2 1772 aa27.18■■□□□ 1.94
EFNA1-204ENST00000474413 ZFYVE9O95405 1425 aa27.17■■□□□ 1.94
EFNA1-204ENST00000474413 SLC52A1Q9NWF4 448 aa27.17■■□□□ 1.94
EFNA1-204ENST00000474413 TRPM2O94759 1503 aa27.16■■□□□ 1.94
EFNA1-204ENST00000474413 CLTCL1P53675 1640 aa27.15■■□□□ 1.94
EFNA1-204ENST00000474413 FBXO41Q8TF61 875 aa27.14■■□□□ 1.94
EFNA1-204ENST00000474413 IQSEC2Q5JU85 1478 aa27.12■■□□□ 1.93
EFNA1-204ENST00000474413 TXNDC2Q86VQ3 553 aa27.09■■□□□ 1.93
EFNA1-204ENST00000474413 CPS1P31327 1500 aa27.07■■□□□ 1.92
EFNA1-204ENST00000474413 STAG3Q9UJ98 1225 aa27.07■■□□□ 1.92
EFNA1-204ENST00000474413 RIMS2Q9UQ26 1411 aa27.07■■□□□ 1.92
EFNA1-204ENST00000474413 TRIM52Q96A61 297 aa27.03■■□□□ 1.92
EFNA1-204ENST00000474413 SETD5Q9C0A6 1442 aa27.03■■□□□ 1.92
EFNA1-204ENST00000474413 EID1Q9Y6B2 187 aa27.02■■□□□ 1.92
EFNA1-204ENST00000474413 RAB3GAP2Q9H2M9 1393 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms