RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 SLC4A3P48751 1232 aa14.33□□□□□ -0.11
LSS-208ENST00000474319 CAMSAP2Q08AD1 1489 aa14.33□□□□□ -0.12
LSS-208ENST00000474319 RAPGEF3O95398 923 aa14.33□□□□□ -0.12
LSS-208ENST00000474319 RPRD2Q5VT52 1461 aaKnown RBP14.33□□□□□ -0.12
LSS-208ENST00000474319 SPAG9O60271 1321 aaKnown RBP14.32□□□□□ -0.12
LSS-208ENST00000474319 KIF15Q9NS87 1388 aa14.32□□□□□ -0.12
LSS-208ENST00000474319 ERICH6BQ5W0A0 696 aa14.32□□□□□ -0.12
LSS-208ENST00000474319 RCAN3Q9UKA8 241 aa14.31□□□□□ -0.12
LSS-208ENST00000474319 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
LSS-208ENST00000474319 DHX29Q7Z478 1369 aaKnown RBP14.3□□□□□ -0.12
LSS-208ENST00000474319 IPO9Q96P70 1041 aaKnown RBP14.3□□□□□ -0.12
LSS-208ENST00000474319 FAM69CQ0P6D2 419 aa14.3□□□□□ -0.12
LSS-208ENST00000474319 TEX14Q8IWB6 1497 aa14.29□□□□□ -0.12
LSS-208ENST00000474319 ANKRD50Q9ULJ7 1429 aa14.28□□□□□ -0.12
LSS-208ENST00000474319 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
LSS-208ENST00000474319 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
LSS-208ENST00000474319 RRP1P56182 461 aaKnown RBP14.28□□□□□ -0.12
LSS-208ENST00000474319 C9orf84Q5VXU9 1444 aa14.28□□□□□ -0.12
LSS-208ENST00000474319 NUTM2DQ5VT03 806 aaPredicted RBP14.27□□□□□ -0.13
LSS-208ENST00000474319 SPATA31E1Q6ZUB1 1445 aa14.27□□□□□ -0.13
LSS-208ENST00000474319 SMG6Q86US8 1419 aaKnown RBP14.26□□□□□ -0.13
LSS-208ENST00000474319 NEFMP07197 916 aa14.26□□□□□ -0.13
LSS-208ENST00000474319 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
LSS-208ENST00000474319 SCAPERQ9BY12 1400 aa14.24□□□□□ -0.13
LSS-208ENST00000474319 C20orf194Q5TEA3 1177 aa14.24□□□□□ -0.13
LSS-208ENST00000474319 CRBNQ96SW2 442 aa14.24□□□□□ -0.13
LSS-208ENST00000474319 PDE4AP27815 886 aa14.23□□□□□ -0.13
LSS-208ENST00000474319 PANK3Q9H999 370 aa14.23□□□□□ -0.13
LSS-208ENST00000474319 MYBBP1AQ9BQG0 1328 aaKnown RBP14.23□□□□□ -0.13
LSS-208ENST00000474319 ABCA8O94911 1581 aa14.23□□□□□ -0.13
LSS-208ENST00000474319 RGS3P49796 1198 aa14.23□□□□□ -0.13
LSS-208ENST00000474319 IL27Q8NEV9 243 aa14.23□□□□□ -0.13
LSS-208ENST00000474319 PZPP20742 1482 aa14.23□□□□□ -0.13
LSS-208ENST00000474319 KIAA1107Q9UPP5 1409 aa14.22□□□□□ -0.13
LSS-208ENST00000474319 CCDC146Q8IYE0 955 aa14.22□□□□□ -0.13
LSS-208ENST00000474319 ASXL2Q76L83 1435 aa14.2□□□□□ -0.14
LSS-208ENST00000474319 ABCC2Q92887 1545 aa14.19□□□□□ -0.14
LSS-208ENST00000474319 EIF5BO60841 1220 aaKnown RBP14.19□□□□□ -0.14
LSS-208ENST00000474319 ROCK1Q13464 1354 aa14.18□□□□□ -0.14
LSS-208ENST00000474319 TRAPPC8Q9Y2L5 1435 aa14.18□□□□□ -0.14
LSS-208ENST00000474319 SYCP2Q9BX26 1530 aa14.18□□□□□ -0.14
LSS-208ENST00000474319 NLRP13Q86W25 1043 aa14.18□□□□□ -0.14
LSS-208ENST00000474319 BCORL1Q5H9F3 1711 aa14.18□□□□□ -0.14
LSS-208ENST00000474319 GCC2Q8IWJ2 1684 aa14.18□□□□□ -0.14
LSS-208ENST00000474319 DAXXQ9UER7 740 aaPredicted RBP14.17□□□□□ -0.14
LSS-208ENST00000474319 ARID4BQ4LE39 1312 aaPredicted RBP14.17□□□□□ -0.14
LSS-208ENST00000474319 KTN1Q86UP2 1357 aaKnown RBP14.17□□□□□ -0.14
LSS-208ENST00000474319 TNNT2P45379 298 aaPredicted RBP14.17□□□□□ -0.14
LSS-208ENST00000474319 RALBP1Q15311 655 aa14.16□□□□□ -0.14
LSS-208ENST00000474319 NEUROD2Q15784 382 aa14.16□□□□□ -0.14
LSS-208ENST00000474319 ADAMTS8Q9UP79 889 aa14.16□□□□□ -0.14
LSS-208ENST00000474319 RSPH4AQ5TD94 716 aa14.15□□□□□ -0.14
LSS-208ENST00000474319 PLEKHH2Q8IVE3 1493 aa14.15□□□□□ -0.14
LSS-208ENST00000474319 ARXQ96QS3 562 aa14.15□□□□□ -0.14
LSS-208ENST00000474319 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
LSS-208ENST00000474319 ABCC10Q5T3U5 1492 aa14.14□□□□□ -0.15
LSS-208ENST00000474319 WDR43Q15061 677 aaKnown RBP eCLIP14.14□□□□□ -0.155e-11■□□□□ 10.1
LSS-208ENST00000474319 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
LSS-208ENST00000474319 CD109Q6YHK3 1445 aa14.13□□□□□ -0.15
LSS-208ENST00000474319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.13□□□□□ -0.157e-7■■□□□ 14.3
LSS-208ENST00000474319 CCDC141Q6ZP82 1450 aa14.12□□□□□ -0.15
LSS-208ENST00000474319 ANO8Q9HCE9 1232 aaPredicted RBP14.12□□□□□ -0.15
LSS-208ENST00000474319 FANCAO15360 1455 aa14.12□□□□□ -0.15
LSS-208ENST00000474319 WASHC2CQ9Y4E1 1318 aa14.11□□□□□ -0.15
LSS-208ENST00000474319 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
LSS-208ENST00000474319 DISP3Q9P2K9 1392 aa14.11□□□□□ -0.15
LSS-208ENST00000474319 TCERG1O14776 1098 aaKnown RBP14.1□□□□□ -0.15
LSS-208ENST00000474319 RNF123Q5XPI4 1314 aa14.1□□□□□ -0.15
LSS-208ENST00000474319 PLCH2O75038 1416 aa14.1□□□□□ -0.15
LSS-208ENST00000474319 BACH2Q9BYV9 841 aa14.1□□□□□ -0.15
LSS-208ENST00000474319 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
LSS-208ENST00000474319 WDR7Q9Y4E6 1490 aa14.1□□□□□ -0.15
LSS-208ENST00000474319 KNSTRNQ9Y448 316 aa14.1□□□□□ -0.15
LSS-208ENST00000474319 DNMT1P26358 1616 aaKnown RBP14.1□□□□□ -0.15
LSS-208ENST00000474319 BRD4O60885 1362 aaPredicted RBP14.09□□□□□ -0.15
LSS-208ENST00000474319 SAFB2Q14151 953 aaKnown RBP eCLIP14.09□□□□□ -0.15
LSS-208ENST00000474319 ADGRL1O94910 1474 aa14.09□□□□□ -0.15
LSS-208ENST00000474319 CCDC144AA2RUR9 1427 aa14.08□□□□□ -0.16
LSS-208ENST00000474319 ESF1Q9H501 851 aaKnown RBP14.08□□□□□ -0.16
LSS-208ENST00000474319 TMF1P82094 1093 aa14.07□□□□□ -0.16
LSS-208ENST00000474319 ARHGEF12Q9NZN5 1544 aa14.07□□□□□ -0.16
LSS-208ENST00000474319 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
LSS-208ENST00000474319 CANXP27824 592 aaKnown RBP14.06□□□□□ -0.16
LSS-208ENST00000474319 ZCCHC11Q5TAX3 1644 aaKnown RBP14.06□□□□□ -0.16
LSS-208ENST00000474319 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
LSS-208ENST00000474319 RRP7AQ9Y3A4 280 aaKnown RBP14.06□□□□□ -0.16
LSS-208ENST00000474319 BRPF3Q9ULD4 1205 aa14.05□□□□□ -0.16
LSS-208ENST00000474319 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
LSS-208ENST00000474319 APAF1O14727 1248 aa14.04□□□□□ -0.16
LSS-208ENST00000474319 BCAR3O75815 825 aa14.04□□□□□ -0.16
LSS-208ENST00000474319 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
LSS-208ENST00000474319 BCL2L13Q9BXK5 485 aa14.04□□□□□ -0.16
LSS-208ENST00000474319 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
LSS-208ENST00000474319 LRPPRCP42704 1394 aaKnown RBP14.03□□□□□ -0.16
LSS-208ENST00000474319 ITSN2Q9NZM3 1697 aa14.03□□□□□ -0.16
LSS-208ENST00000474319 ADCY10Q96PN6 1610 aa14.03□□□□□ -0.16
LSS-208ENST00000474319 KANK1Q14678 1352 aa14.02□□□□□ -0.16
LSS-208ENST00000474319 SPRYD3Q8NCJ5 442 aa14.02□□□□□ -0.16
LSS-208ENST00000474319 KDM5CP41229 1560 aa14.02□□□□□ -0.17
LSS-208ENST00000474319 TESK2Q96S53 571 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms