RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.69□□□□□ -0.7
TMEM50B-208ENST00000474272 GOLGA8CPA6NN73 597 aa10.68□□□□□ -0.7
TMEM50B-208ENST00000474272 PHF14O94880 888 aa10.68□□□□□ -0.7
TMEM50B-208ENST00000474272 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
TMEM50B-208ENST00000474272 WNT2BQ93097 391 aa10.67□□□□□ -0.7
TMEM50B-208ENST00000474272 PPP1R3GB7ZBB8 358 aa10.66□□□□□ -0.7
TMEM50B-208ENST00000474272 THSD4Q6ZMP0 1018 aa10.65□□□□□ -0.7
TMEM50B-208ENST00000474272 FBXW7Q969H0 707 aa10.65□□□□□ -0.7
TMEM50B-208ENST00000474272 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
TMEM50B-208ENST00000474272 NBPF3Q9H094 633 aa10.63□□□□□ -0.71
TMEM50B-208ENST00000474272 EPAS1Q99814 870 aa10.61□□□□□ -0.71
TMEM50B-208ENST00000474272 KIAA1468Q9P260 1216 aa10.61□□□□□ -0.71
TMEM50B-208ENST00000474272 RABGEF1Q9UJ41 708 aa10.61□□□□□ -0.71
TMEM50B-208ENST00000474272 NBR1Q14596 966 aa10.58□□□□□ -0.72
TMEM50B-208ENST00000474272 E2F4Q16254 413 aa10.58□□□□□ -0.72
TMEM50B-208ENST00000474272 TSR1Q2NL82 804 aaKnown RBP10.58□□□□□ -0.72
TMEM50B-208ENST00000474272 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
TMEM50B-208ENST00000474272 BCAMP50895 628 aa10.56□□□□□ -0.72
TMEM50B-208ENST00000474272 PDIA6Q15084 440 aa10.56□□□□□ -0.72
TMEM50B-208ENST00000474272 MAP3K7O43318 606 aa10.55□□□□□ -0.72
TMEM50B-208ENST00000474272 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
TMEM50B-208ENST00000474272 GRXCR2A6NFK2 248 aa10.54□□□□□ -0.72
TMEM50B-208ENST00000474272 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
TMEM50B-208ENST00000474272 ANKK1Q8NFD2 765 aa10.54□□□□□ -0.72
TMEM50B-208ENST00000474272 TRIM6-TRIM34B2RNG4 842 aa10.53□□□□□ -0.72
TMEM50B-208ENST00000474272 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
TMEM50B-208ENST00000474272 ZFRQ96KR1 1074 aaKnown RBP10.52□□□□□ -0.73
TMEM50B-208ENST00000474272 SPDYE16A6NNV3 312 aaPredicted RBP10.51□□□□□ -0.73
TMEM50B-208ENST00000474272 TSKSQ9UJT2 592 aa10.5□□□□□ -0.73
TMEM50B-208ENST00000474272 SOWAHBA6NEL2 793 aa10.49□□□□□ -0.73
TMEM50B-208ENST00000474272 LAPTM4BQ86VI4 370 aa10.49□□□□□ -0.73
TMEM50B-208ENST00000474272 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
TMEM50B-208ENST00000474272 WBP1LQ9NX94 342 aa10.48□□□□□ -0.73
TMEM50B-208ENST00000474272 SMAPO00193 183 aa10.47□□□□□ -0.73
TMEM50B-208ENST00000474272 TSHZ2Q9NRE2 1034 aa10.47□□□□□ -0.73
TMEM50B-208ENST00000474272 FAM198AQ9UFP1 575 aa10.46□□□□□ -0.73
TMEM50B-208ENST00000474272 C3orf80F5H4A9 247 aa10.45□□□□□ -0.74
TMEM50B-208ENST00000474272 FAM98CQ17RN3 349 aaKnown RBP10.45□□□□□ -0.74
TMEM50B-208ENST00000474272 PACS2Q86VP3 889 aa10.44□□□□□ -0.74
TMEM50B-208ENST00000474272 CDCA7LQ96GN5 454 aa10.44□□□□□ -0.74
TMEM50B-208ENST00000474272 CDHR5Q9HBB8 845 aa10.44□□□□□ -0.74
TMEM50B-208ENST00000474272 ARIH1Q9Y4X5 557 aaPredicted RBP10.44□□□□□ -0.74
TMEM50B-208ENST00000474272 OSBPP22059 807 aa10.43□□□□□ -0.74
TMEM50B-208ENST00000474272 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
TMEM50B-208ENST00000474272 PRSS12P56730 875 aa10.41□□□□□ -0.74
TMEM50B-208ENST00000474272 HPS5Q9UPZ3 1129 aa10.41□□□□□ -0.74
TMEM50B-208ENST00000474272 A0A0G2JS52 829 aa10.4□□□□□ -0.74
TMEM50B-208ENST00000474272 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
TMEM50B-208ENST00000474272 LRCH3Q96II8 777 aa10.4□□□□□ -0.74
TMEM50B-208ENST00000474272 SAMD7Q7Z3H4 446 aa10.37□□□□□ -0.75
TMEM50B-208ENST00000474272 TSR3Q9UJK0 312 aaKnown RBP10.37□□□□□ -0.75
TMEM50B-208ENST00000474272 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
TMEM50B-208ENST00000474272 TATDN2Q93075 761 aa10.36□□□□□ -0.75
TMEM50B-208ENST00000474272 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
TMEM50B-208ENST00000474272 MLLT3P42568 568 aaPredicted RBP10.34□□□□□ -0.75
TMEM50B-208ENST00000474272 NUDT18Q6ZVK8 323 aa10.34□□□□□ -0.75
TMEM50B-208ENST00000474272 CERKQ8TCT0 537 aa10.34□□□□□ -0.75
TMEM50B-208ENST00000474272 PPP4CP60510 307 aa10.33□□□□□ -0.76
TMEM50B-208ENST00000474272 NPDC1Q9NQX5 325 aaPredicted RBP10.33□□□□□ -0.76
TMEM50B-208ENST00000474272 NYAP1Q6ZVC0 841 aa10.32□□□□□ -0.76
TMEM50B-208ENST00000474272 KCNV2Q8TDN2 545 aa10.32□□□□□ -0.76
TMEM50B-208ENST00000474272 KCNC4Q03721 635 aa10.31□□□□□ -0.76
TMEM50B-208ENST00000474272 NBPF26B4DH59 902 aa10.3□□□□□ -0.76
TMEM50B-208ENST00000474272 PADI6Q6TGC4 694 aa10.3□□□□□ -0.76
TMEM50B-208ENST00000474272 RNF40O75150 1001 aa10.29□□□□□ -0.76
TMEM50B-208ENST00000474272 RGS20O76081 388 aa10.28□□□□□ -0.76
TMEM50B-208ENST00000474272 ARHGEF1Q92888 912 aaKnown RBP10.28□□□□□ -0.76
TMEM50B-208ENST00000474272 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
TMEM50B-208ENST00000474272 IRX2Q9BZI1 471 aaPredicted RBP10.25□□□□□ -0.77
TMEM50B-208ENST00000474272 TJAP1Q5JTD0 557 aa10.24□□□□□ -0.77
TMEM50B-208ENST00000474272 SWT1Q5T5J6 900 aaKnown RBP10.23□□□□□ -0.77
TMEM50B-208ENST00000474272 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
TMEM50B-208ENST00000474272 APLP1P51693 650 aa10.22□□□□□ -0.77
TMEM50B-208ENST00000474272 HDGFP51858 240 aaKnown RBP10.22□□□□□ -0.77
TMEM50B-208ENST00000474272 ZNF516Q92618 1163 aa10.22□□□□□ -0.77
TMEM50B-208ENST00000474272 MTRQ99707 1265 aa10.22□□□□□ -0.77
TMEM50B-208ENST00000474272 FAM161AQ3B820 660 aa10.2□□□□□ -0.78
TMEM50B-208ENST00000474272 EYA1Q99502 592 aa10.2□□□□□ -0.78
TMEM50B-208ENST00000474272 NUTM2FA1L443 756 aa10.19□□□□□ -0.78
TMEM50B-208ENST00000474272 SEMA3EO15041 775 aa10.19□□□□□ -0.78
TMEM50B-208ENST00000474272 PTGDRQ13258 359 aa10.18□□□□□ -0.78
TMEM50B-208ENST00000474272 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
TMEM50B-208ENST00000474272 COPS2P61201 443 aa10.16□□□□□ -0.78
TMEM50B-208ENST00000474272 IL21Q9HBE4 155 aa10.16□□□□□ -0.78
TMEM50B-208ENST00000474272 PPP1R18Q6NYC8 613 aa10.13□□□□□ -0.79
TMEM50B-208ENST00000474272 SLF2Q8IX21 1173 aa10.13□□□□□ -0.79
TMEM50B-208ENST00000474272 ADGRG1Q9Y653 693 aa10.12□□□□□ -0.79
TMEM50B-208ENST00000474272 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
TMEM50B-208ENST00000474272 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
TMEM50B-208ENST00000474272 PRKD2Q9BZL6 878 aa10.1□□□□□ -0.79
TMEM50B-208ENST00000474272 RCCD1A6NED2 376 aa10.08□□□□□ -0.8
TMEM50B-208ENST00000474272 RBM26Q5T8P6 1007 aaKnown RBP10.08□□□□□ -0.8
TMEM50B-208ENST00000474272 Q6ZNB5 142 aa10.08□□□□□ -0.8
TMEM50B-208ENST00000474272 RBM46Q8TBY0 533 aaKnown RBP10.08□□□□□ -0.8
TMEM50B-208ENST00000474272 DNAJB2P25686 324 aa10.07□□□□□ -0.8
TMEM50B-208ENST00000474272 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
TMEM50B-208ENST00000474272 FCHSD2O94868 740 aa10.06□□□□□ -0.8
TMEM50B-208ENST00000474272 SLC4A3P48751 1232 aa10.06□□□□□ -0.8
TMEM50B-208ENST00000474272 TMEM134Q9H6X4 195 aa10.06□□□□□ -0.8
TMEM50B-208ENST00000474272 BLOC1S3Q6QNY0 202 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms