RNA–Protein interactions for RNA: ENST00000474008.1

SRCAP-204, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-204ENST00000474008 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
SRCAP-204ENST00000474008 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
SRCAP-204ENST00000474008 NPATQ14207 1427 aa19.14■□□□□ 0.65
SRCAP-204ENST00000474008 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
SRCAP-204ENST00000474008 CLTCQ00610 1675 aaKnown RBP19.14■□□□□ 0.65
SRCAP-204ENST00000474008 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
SRCAP-204ENST00000474008 DISP3Q9P2K9 1392 aa19.11■□□□□ 0.65
SRCAP-204ENST00000474008 KIF3BO15066 747 aa19.09■□□□□ 0.65
SRCAP-204ENST00000474008 U3KPZ7 1027 aaPredicted RBP19.09■□□□□ 0.65
SRCAP-204ENST00000474008 DHX29Q7Z478 1369 aaKnown RBP19.07■□□□□ 0.64
SRCAP-204ENST00000474008 MROH2AA6NES4 1674 aa19.07■□□□□ 0.64
SRCAP-204ENST00000474008 EHBP1L1Q8N3D4 1523 aa19.06■□□□□ 0.64
SRCAP-204ENST00000474008 NCOA2Q15596 1464 aa19.06■□□□□ 0.64
SRCAP-204ENST00000474008 MYO3AQ8NEV4 1616 aa19.04■□□□□ 0.64
SRCAP-204ENST00000474008 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
SRCAP-204ENST00000474008 CEP170BQ9Y4F5 1589 aaPredicted RBP19.03■□□□□ 0.64
SRCAP-204ENST00000474008 TCOF1Q13428 1488 aaKnown RBP19.03■□□□□ 0.64
SRCAP-204ENST00000474008 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
SRCAP-204ENST00000474008 CAMSAP2Q08AD1 1489 aa19.02■□□□□ 0.63
SRCAP-204ENST00000474008 UBAP1LF5GYI3 381 aa19.01■□□□□ 0.63
SRCAP-204ENST00000474008 PKD2Q13563 968 aa19.01■□□□□ 0.63
SRCAP-204ENST00000474008 ADGBQ8N7X0 1667 aa18.99■□□□□ 0.63
SRCAP-204ENST00000474008 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
SRCAP-204ENST00000474008 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
SRCAP-204ENST00000474008 PLA2R1Q13018 1463 aa18.98■□□□□ 0.63
SRCAP-204ENST00000474008 TNRQ92752 1358 aa18.98■□□□□ 0.63
SRCAP-204ENST00000474008 A2ML1A8K2U0 1454 aa18.97■□□□□ 0.63
SRCAP-204ENST00000474008 DNMT1P26358 1616 aaKnown RBP18.96■□□□□ 0.63
SRCAP-204ENST00000474008 ZNF142P52746 1687 aaPredicted RBP18.96■□□□□ 0.63
SRCAP-204ENST00000474008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
SRCAP-204ENST00000474008 PZPP20742 1482 aa18.92■□□□□ 0.62
SRCAP-204ENST00000474008 IQSEC2Q5JU85 1478 aa18.92■□□□□ 0.62
SRCAP-204ENST00000474008 LRRC9Q6ZRR7 1453 aa18.92■□□□□ 0.62
SRCAP-204ENST00000474008 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
SRCAP-204ENST00000474008 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
SRCAP-204ENST00000474008 SOCS7O14512 581 aa18.91■□□□□ 0.62
SRCAP-204ENST00000474008 PIP4K2BP78356 416 aa18.91■□□□□ 0.62
SRCAP-204ENST00000474008 MIA2Q96PC5 1412 aa18.91■□□□□ 0.62
SRCAP-204ENST00000474008 NEURL4Q96JN8 1562 aa18.9■□□□□ 0.62
SRCAP-204ENST00000474008 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
SRCAP-204ENST00000474008 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
SRCAP-204ENST00000474008 ATXN8OSP0DMR3 200 aa18.89■□□□□ 0.61
SRCAP-204ENST00000474008 VPS8Q8N3P4 1428 aa18.89■□□□□ 0.61
SRCAP-204ENST00000474008 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.61
SRCAP-204ENST00000474008 HSPA1LP34931 641 aa18.88■□□□□ 0.61
SRCAP-204ENST00000474008 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
SRCAP-204ENST00000474008 ARHGEF5Q12774 1597 aa18.86■□□□□ 0.61
SRCAP-204ENST00000474008 THEMISQ8N1K5 641 aaPredicted RBP18.84■□□□□ 0.61
SRCAP-204ENST00000474008 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
SRCAP-204ENST00000474008 ABCC3O15438 1527 aa18.83■□□□□ 0.6
SRCAP-204ENST00000474008 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
SRCAP-204ENST00000474008 NPHP4O75161 1426 aaPredicted RBP18.82■□□□□ 0.6
SRCAP-204ENST00000474008 UGGT1Q9NYU2 1555 aa18.81■□□□□ 0.6
SRCAP-204ENST00000474008 VWDEQ8N2E2 1590 aa18.81■□□□□ 0.6
SRCAP-204ENST00000474008 MYOM3Q5VTT5 1437 aa18.8■□□□□ 0.6
SRCAP-204ENST00000474008 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
SRCAP-204ENST00000474008 MROH1Q8NDA8 1641 aa18.79■□□□□ 0.6
SRCAP-204ENST00000474008 RNF39Q9H2S5 420 aa18.79■□□□□ 0.6
SRCAP-204ENST00000474008 LTKP29376 864 aa18.78■□□□□ 0.6
SRCAP-204ENST00000474008 ATF5Q9Y2D1 282 aaPredicted RBP18.78■□□□□ 0.6
SRCAP-204ENST00000474008 ERVK-7P63135 1459 aa18.77■□□□□ 0.6
SRCAP-204ENST00000474008 CHIC2Q9UKJ5 165 aa18.77■□□□□ 0.6
SRCAP-204ENST00000474008 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
SRCAP-204ENST00000474008 ALKQ9UM73 1620 aa18.77■□□□□ 0.6
SRCAP-204ENST00000474008 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
SRCAP-204ENST00000474008 ABCC5O15440 1437 aa18.76■□□□□ 0.59
SRCAP-204ENST00000474008 RNF17Q9BXT8 1623 aaKnown RBP18.76■□□□□ 0.59
SRCAP-204ENST00000474008 TOM1O60784 492 aa18.76■□□□□ 0.59
SRCAP-204ENST00000474008 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
SRCAP-204ENST00000474008 MED14O60244 1454 aa18.76■□□□□ 0.59
SRCAP-204ENST00000474008 SAMD1Q6SPF0 538 aaPredicted RBP18.75■□□□□ 0.59
SRCAP-204ENST00000474008 CPS1P31327 1500 aa18.74■□□□□ 0.59
SRCAP-204ENST00000474008 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
SRCAP-204ENST00000474008 KIF15Q9NS87 1388 aa18.73■□□□□ 0.59
SRCAP-204ENST00000474008 STRCP1A6NGW2 1772 aa18.73■□□□□ 0.59
SRCAP-204ENST00000474008 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
SRCAP-204ENST00000474008 CEP152O94986 1710 aa18.71■□□□□ 0.59
SRCAP-204ENST00000474008 LRRC7Q96NW7 1537 aa18.7■□□□□ 0.58
SRCAP-204ENST00000474008 TXNDC2Q86VQ3 553 aa18.7■□□□□ 0.58
SRCAP-204ENST00000474008 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
SRCAP-204ENST00000474008 DEPDC5O75140 1603 aa18.69■□□□□ 0.58
SRCAP-204ENST00000474008 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
SRCAP-204ENST00000474008 IQGAP1P46940 1657 aa18.68■□□□□ 0.58
SRCAP-204ENST00000474008 DAPK1P53355 1430 aa18.66■□□□□ 0.58
SRCAP-204ENST00000474008 IDI1Q13907 227 aa18.66■□□□□ 0.58
SRCAP-204ENST00000474008 EIF2AK4Q9P2K8 1649 aaKnown RBP18.66■□□□□ 0.58
SRCAP-204ENST00000474008 MED1Q15648 1581 aaPredicted RBP18.65■□□□□ 0.58
SRCAP-204ENST00000474008 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
SRCAP-204ENST00000474008 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
SRCAP-204ENST00000474008 UBR1Q8IWV7 1749 aa18.64■□□□□ 0.57
SRCAP-204ENST00000474008 FGD6Q6ZV73 1430 aa18.64■□□□□ 0.57
SRCAP-204ENST00000474008 ZC3H13Q5T200 1668 aaKnown RBP18.63■□□□□ 0.57
SRCAP-204ENST00000474008 APLP2Q06481 763 aa18.63■□□□□ 0.57
SRCAP-204ENST00000474008 ARHGAP23Q9P227 1491 aa18.63■□□□□ 0.57
SRCAP-204ENST00000474008 ARHGAP31Q2M1Z3 1444 aa18.62■□□□□ 0.57
SRCAP-204ENST00000474008 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
SRCAP-204ENST00000474008 PRDM15P57071 1507 aaPredicted RBP18.62■□□□□ 0.57
SRCAP-204ENST00000474008 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
SRCAP-204ENST00000474008 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
SRCAP-204ENST00000474008 SLIT1O75093 1534 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 359 ms