RNA–Protein interactions for RNA: ENST00000473578.5

CAMTA1-208, Transcript of calmodulin binding transcription activator 1, humanhuman

TSL 1 (best) BASIC

Gene CAMTA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA1-208ENST00000473578 FAM135AQ9P2D6 1515 aa34.38■■■■□ 3.09
CAMTA1-208ENST00000473578 TCOF1Q13428 1488 aaKnown RBP34.38■■■■□ 3.09
CAMTA1-208ENST00000473578 RRP7BPQ9NSQ0 103 aa34.37■■■■□ 3.09
CAMTA1-208ENST00000473578 DAPK1P53355 1430 aa34.37■■■■□ 3.09
CAMTA1-208ENST00000473578 STRCQ7RTU9 1775 aa34.36■■■■□ 3.09
CAMTA1-208ENST00000473578 SHANK2Q9UPX8 1470 aa34.36■■■■□ 3.09
CAMTA1-208ENST00000473578 FBXO31Q5XUX0 539 aaPredicted RBP34.35■■■■□ 3.09
CAMTA1-208ENST00000473578 KIF15Q9NS87 1388 aa34.35■■■■□ 3.09
CAMTA1-208ENST00000473578 FBXO41Q8TF61 875 aa34.34■■■■□ 3.09
CAMTA1-208ENST00000473578 DUOX2Q9NRD8 1548 aa34.34■■■■□ 3.09
CAMTA1-208ENST00000473578 FAM50AQ14320 339 aaKnown RBP34.32■■■■□ 3.08
CAMTA1-208ENST00000473578 NCOA1Q15788 1441 aa34.31■■■■□ 3.08
CAMTA1-208ENST00000473578 MYO3AQ8NEV4 1616 aa34.31■■■■□ 3.08
CAMTA1-208ENST00000473578 CHIC2Q9UKJ5 165 aa34.31■■■■□ 3.08
CAMTA1-208ENST00000473578 PZPP20742 1482 aa34.31■■■■□ 3.08
CAMTA1-208ENST00000473578 DNMT1P26358 1616 aaKnown RBP34.3■■■■□ 3.08
CAMTA1-208ENST00000473578 CAMSAP1Q5T5Y3 1602 aa34.3■■■■□ 3.08
CAMTA1-208ENST00000473578 EIF2AK4Q9P2K8 1649 aaKnown RBP34.3■■■■□ 3.08
CAMTA1-208ENST00000473578 CROCC2H7BZ55 1655 aa34.29■■■■□ 3.08
CAMTA1-208ENST00000473578 TNRQ92752 1358 aa34.29■■■■□ 3.08
CAMTA1-208ENST00000473578 RNF17Q9BXT8 1623 aaKnown RBP34.29■■■■□ 3.08
CAMTA1-208ENST00000473578 PTPRTO14522 1441 aa34.28■■■■□ 3.08
CAMTA1-208ENST00000473578 CEP170BQ9Y4F5 1589 aaPredicted RBP34.28■■■■□ 3.08
CAMTA1-208ENST00000473578 CERKQ8TCT0 537 aa34.26■■■■□ 3.08
CAMTA1-208ENST00000473578 ANKRD30AQ9BXX3 1397 aa34.25■■■■□ 3.07
CAMTA1-208ENST00000473578 ZNF142P52746 1687 aaPredicted RBP34.24■■■■□ 3.07
CAMTA1-208ENST00000473578 NCKAP5LQ9HCH0 1330 aa34.24■■■■□ 3.07
CAMTA1-208ENST00000473578 ERBINQ96RT1 1412 aa34.23■■■■□ 3.07
CAMTA1-208ENST00000473578 ABCC3O15438 1527 aa34.23■■■■□ 3.07
CAMTA1-208ENST00000473578 A2ML1A8K2U0 1454 aa34.22■■■■□ 3.07
CAMTA1-208ENST00000473578 PKD2Q13563 968 aa34.19■■■■□ 3.06
CAMTA1-208ENST00000473578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.19■■■■□ 3.06
CAMTA1-208ENST00000473578 PLA2R1Q13018 1463 aa34.18■■■■□ 3.06
CAMTA1-208ENST00000473578 ZC3H13Q5T200 1668 aaKnown RBP34.17■■■■□ 3.06
CAMTA1-208ENST00000473578 MROH1Q8NDA8 1641 aa34.17■■■■□ 3.06
CAMTA1-208ENST00000473578 PPARGC1BQ86YN6 1023 aaKnown RBP34.16■■■■□ 3.06
CAMTA1-208ENST00000473578 NLRP1Q9C000 1473 aa34.11■■■■□ 3.05
CAMTA1-208ENST00000473578 KANK1Q14678 1352 aa34.11■■■■□ 3.05
CAMTA1-208ENST00000473578 THEMISQ8N1K5 641 aaPredicted RBP34.09■■■■□ 3.05
CAMTA1-208ENST00000473578 PRDM15P57071 1507 aaPredicted RBP34.09■■■■□ 3.05
CAMTA1-208ENST00000473578 CEP152O94986 1710 aa34.08■■■■□ 3.05
CAMTA1-208ENST00000473578 ADGRL2O95490 1459 aa34.07■■■■□ 3.05
CAMTA1-208ENST00000473578 ERVK-7P63135 1459 aa34.07■■■■□ 3.04
CAMTA1-208ENST00000473578 SPATA31D1Q6ZQQ2 1576 aa34.05■■■■□ 3.04
CAMTA1-208ENST00000473578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.03■■■■□ 3.04
CAMTA1-208ENST00000473578 UGGT1Q9NYU2 1555 aa34.02■■■■□ 3.04
CAMTA1-208ENST00000473578 ANKLE2Q86XL3 938 aa34.01■■■■□ 3.03
CAMTA1-208ENST00000473578 ARHGAP31Q2M1Z3 1444 aa34.01■■■■□ 3.03
CAMTA1-208ENST00000473578 DEPDC5O75140 1603 aa34.01■■■■□ 3.03
CAMTA1-208ENST00000473578 ANKRD50Q9ULJ7 1429 aa33.98■■■■□ 3.03
CAMTA1-208ENST00000473578 ZNF335Q9H4Z2 1342 aaPredicted RBP33.98■■■■□ 3.03
CAMTA1-208ENST00000473578 ITGAEP38570 1179 aa33.97■■■■□ 3.03
CAMTA1-208ENST00000473578 LTBP4Q8N2S1 1624 aa33.97■■■■□ 3.03
CAMTA1-208ENST00000473578 CFAP65Q6ZU64 1925 aaKnown RBP33.93■■■■□ 3.02
CAMTA1-208ENST00000473578 LMTK2Q8IWU2 1503 aa33.9■■■■□ 3.02
CAMTA1-208ENST00000473578 VWDEQ8N2E2 1590 aa33.89■■■■□ 3.02
CAMTA1-208ENST00000473578 ROCK1Q13464 1354 aa33.88■■■■□ 3.01
CAMTA1-208ENST00000473578 POLR1AO95602 1720 aaPredicted RBP33.88■■■■□ 3.01
CAMTA1-208ENST00000473578 NEURL4Q96JN8 1562 aa33.87■■■■□ 3.01
CAMTA1-208ENST00000473578 STAG3Q9UJ98 1225 aa33.84■■■■□ 3.01
CAMTA1-208ENST00000473578 NPHP4O75161 1426 aaPredicted RBP33.84■■■■□ 3.01
CAMTA1-208ENST00000473578 IQSEC2Q5JU85 1478 aa33.81■■■■□ 3
CAMTA1-208ENST00000473578 EFCAB6Q5THR3 1501 aa33.8■■■■□ 3
CAMTA1-208ENST00000473578 MED14O60244 1454 aa33.8■■■■□ 3
CAMTA1-208ENST00000473578 UBR1Q8IWV7 1749 aa33.79■■■■□ 3
CAMTA1-208ENST00000473578 IDI1Q13907 227 aa33.77■■■■□ 3
CAMTA1-208ENST00000473578 TXNDC2Q86VQ3 553 aa33.76■■■□□ 2.99
CAMTA1-208ENST00000473578 NOS1P29475 1434 aa33.74■■■□□ 2.99
CAMTA1-208ENST00000473578 EID1Q9Y6B2 187 aa33.74■■■□□ 2.99
CAMTA1-208ENST00000473578 PIK3C2BO00750 1634 aa33.72■■■□□ 2.99
CAMTA1-208ENST00000473578 SCAF11Q99590 1463 aaKnown RBP33.72■■■□□ 2.99
CAMTA1-208ENST00000473578 RPRD2Q5VT52 1461 aaKnown RBP33.71■■■□□ 2.99
CAMTA1-208ENST00000473578 LTKP29376 864 aa33.71■■■□□ 2.99
CAMTA1-208ENST00000473578 SLC52A1Q9NWF4 448 aa33.71■■■□□ 2.99
CAMTA1-208ENST00000473578 RRBP1Q9P2E9 1410 aaKnown RBP33.7■■■□□ 2.99
CAMTA1-208ENST00000473578 UNC13BO14795 1591 aa33.7■■■□□ 2.99
CAMTA1-208ENST00000473578 IQGAP1P46940 1657 aa33.7■■■□□ 2.99
CAMTA1-208ENST00000473578 ARHGAP23Q9P227 1491 aa33.69■■■□□ 2.98
CAMTA1-208ENST00000473578 SYNMO15061 1565 aa33.69■■■□□ 2.98
CAMTA1-208ENST00000473578 SLIT1O75093 1534 aa33.69■■■□□ 2.98
CAMTA1-208ENST00000473578 UBAP1LF5GYI3 381 aa33.68■■■□□ 2.98
CAMTA1-208ENST00000473578 TMEM2Q9UHN6 1383 aa33.68■■■□□ 2.98
CAMTA1-208ENST00000473578 NUP155O75694 1391 aa33.67■■■□□ 2.98
CAMTA1-208ENST00000473578 TET3O43151 1660 aa33.67■■■□□ 2.98
CAMTA1-208ENST00000473578 CPS1P31327 1500 aa33.66■■■□□ 2.98
CAMTA1-208ENST00000473578 KDM5AP29375 1690 aaKnown RBP33.58■■■□□ 2.97
CAMTA1-208ENST00000473578 GCC2Q8IWJ2 1684 aa33.58■■■□□ 2.97
CAMTA1-208ENST00000473578 ADGRB3O60242 1522 aa33.58■■■□□ 2.97
CAMTA1-208ENST00000473578 IQGAP3Q86VI3 1631 aa33.57■■■□□ 2.96
CAMTA1-208ENST00000473578 FOXD1Q16676 465 aa33.55■■■□□ 2.96
CAMTA1-208ENST00000473578 CHGAP10645 457 aaKnown RBP33.53■■■□□ 2.96
CAMTA1-208ENST00000473578 TOM1O60784 492 aa33.51■■■□□ 2.95
CAMTA1-208ENST00000473578 E9PCH4 1651 aa33.51■■■□□ 2.95
CAMTA1-208ENST00000473578 BCANQ96GW7 911 aa33.5■■■□□ 2.95
CAMTA1-208ENST00000473578 SCAF1Q9H7N4 1312 aaKnown RBP33.49■■■□□ 2.95
CAMTA1-208ENST00000473578 NAIPQ13075 1403 aa33.48■■■□□ 2.95
CAMTA1-208ENST00000473578 HDGFP51858 240 aaKnown RBP33.47■■■□□ 2.95
CAMTA1-208ENST00000473578 PIP4K2BP78356 416 aa33.46■■■□□ 2.95
CAMTA1-208ENST00000473578 SLC26A8Q96RN1 970 aa33.46■■■□□ 2.95
CAMTA1-208ENST00000473578 PPP1R15AO75807 674 aaPredicted RBP33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms