RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 HSPA1LP34931 641 aa20.42■□□□□ 0.86
TRAF4-209ENST00000473421 TNRQ92752 1358 aa20.42■□□□□ 0.86
TRAF4-209ENST00000473421 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
TRAF4-209ENST00000473421 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
TRAF4-209ENST00000473421 PIP4K2BP78356 416 aa20.4■□□□□ 0.86
TRAF4-209ENST00000473421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.39■□□□□ 0.85
TRAF4-209ENST00000473421 POLR1AO95602 1720 aaPredicted RBP20.38■□□□□ 0.85
TRAF4-209ENST00000473421 PZPP20742 1482 aa20.37■□□□□ 0.85
TRAF4-209ENST00000473421 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
TRAF4-209ENST00000473421 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
TRAF4-209ENST00000473421 NCOA2Q15596 1464 aa20.37■□□□□ 0.85
TRAF4-209ENST00000473421 SHANK2Q9UPX8 1470 aa20.37■□□□□ 0.85
TRAF4-209ENST00000473421 WASHC2CQ9Y4E1 1318 aa20.36■□□□□ 0.85
TRAF4-209ENST00000473421 KDM5DQ9BY66 1539 aa20.36■□□□□ 0.85
TRAF4-209ENST00000473421 CCDC141Q6ZP82 1450 aa20.36■□□□□ 0.85
TRAF4-209ENST00000473421 ALKQ9UM73 1620 aa20.35■□□□□ 0.85
TRAF4-209ENST00000473421 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
TRAF4-209ENST00000473421 MIA2Q96PC5 1412 aa20.34■□□□□ 0.85
TRAF4-209ENST00000473421 MED1Q15648 1581 aaPredicted RBP20.31■□□□□ 0.84
TRAF4-209ENST00000473421 ANKLE2Q86XL3 938 aa20.31■□□□□ 0.84
TRAF4-209ENST00000473421 CPS1P31327 1500 aa20.31■□□□□ 0.84
TRAF4-209ENST00000473421 STRCP1A6NGW2 1772 aa20.29■□□□□ 0.84
TRAF4-209ENST00000473421 TOM1O60784 492 aa20.29■□□□□ 0.84
TRAF4-209ENST00000473421 UGGT1Q9NYU2 1555 aa20.29■□□□□ 0.84
TRAF4-209ENST00000473421 NPHP4O75161 1426 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-209ENST00000473421 THEMISQ8N1K5 641 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-209ENST00000473421 MED14O60244 1454 aa20.27■□□□□ 0.84
TRAF4-209ENST00000473421 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-209ENST00000473421 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
TRAF4-209ENST00000473421 ARHGEF5Q12774 1597 aa20.25■□□□□ 0.83
TRAF4-209ENST00000473421 RSPH4AQ5TD94 716 aa20.25■□□□□ 0.83
TRAF4-209ENST00000473421 ABCC3O15438 1527 aa20.24■□□□□ 0.83
TRAF4-209ENST00000473421 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
TRAF4-209ENST00000473421 DEPDC5O75140 1603 aa20.24■□□□□ 0.83
TRAF4-209ENST00000473421 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
TRAF4-209ENST00000473421 TSPY4P0CV99 314 aa20.22■□□□□ 0.83
TRAF4-209ENST00000473421 TSPY10P0CW01 314 aa20.22■□□□□ 0.83
TRAF4-209ENST00000473421 MROH1Q8NDA8 1641 aa20.22■□□□□ 0.83
TRAF4-209ENST00000473421 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
TRAF4-209ENST00000473421 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
TRAF4-209ENST00000473421 RNF17Q9BXT8 1623 aaKnown RBP20.21■□□□□ 0.83
TRAF4-209ENST00000473421 LRRC7Q96NW7 1537 aa20.21■□□□□ 0.83
TRAF4-209ENST00000473421 ERVK-7P63135 1459 aa20.19■□□□□ 0.82
TRAF4-209ENST00000473421 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
TRAF4-209ENST00000473421 LOC105371045A0A1W2PR82 267 aa20.18■□□□□ 0.82
TRAF4-209ENST00000473421 MAST1Q9Y2H9 1570 aa20.17■□□□□ 0.82
TRAF4-209ENST00000473421 CEP152O94986 1710 aa20.17■□□□□ 0.82
TRAF4-209ENST00000473421 LTKP29376 864 aa20.17■□□□□ 0.82
TRAF4-209ENST00000473421 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
TRAF4-209ENST00000473421 UBR1Q8IWV7 1749 aa20.14■□□□□ 0.81
TRAF4-209ENST00000473421 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
TRAF4-209ENST00000473421 EIF2AK4Q9P2K8 1649 aaKnown RBP20.11■□□□□ 0.81
TRAF4-209ENST00000473421 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
TRAF4-209ENST00000473421 RGS17Q9UGC6 210 aaPredicted RBP20.1■□□□□ 0.81
TRAF4-209ENST00000473421 XIRP1Q702N8 1843 aaKnown RBP20.1■□□□□ 0.81
TRAF4-209ENST00000473421 TXNDC2Q86VQ3 553 aa20.09■□□□□ 0.81
TRAF4-209ENST00000473421 SCAF11Q99590 1463 aaKnown RBP20.09■□□□□ 0.81
TRAF4-209ENST00000473421 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
TRAF4-209ENST00000473421 MYOM3Q5VTT5 1437 aa20.08■□□□□ 0.8
TRAF4-209ENST00000473421 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
TRAF4-209ENST00000473421 SYNMO15061 1565 aa20.07■□□□□ 0.8
TRAF4-209ENST00000473421 SLIT1O75093 1534 aa20.06■□□□□ 0.8
TRAF4-209ENST00000473421 DUOX2Q9NRD8 1548 aa20.06■□□□□ 0.8
TRAF4-209ENST00000473421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.89e-7■■■□□ 14.9
TRAF4-209ENST00000473421 ABCC5O15440 1437 aa20.04■□□□□ 0.8
TRAF4-209ENST00000473421 RBM33Q96EV2 1170 aaKnown RBP20.04■□□□□ 0.8
TRAF4-209ENST00000473421 KIF15Q9NS87 1388 aa20.04■□□□□ 0.8
TRAF4-209ENST00000473421 ARHGAP31Q2M1Z3 1444 aa20.02■□□□□ 0.8
TRAF4-209ENST00000473421 PRDM15P57071 1507 aaPredicted RBP20.02■□□□□ 0.8
TRAF4-209ENST00000473421 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
TRAF4-209ENST00000473421 MAP3K1Q13233 1512 aa20■□□□□ 0.79
TRAF4-209ENST00000473421 TMEM2Q9UHN6 1383 aa19.99■□□□□ 0.79
TRAF4-209ENST00000473421 IDI1Q13907 227 aa19.99■□□□□ 0.79
TRAF4-209ENST00000473421 CROCC2H7BZ55 1655 aa19.98■□□□□ 0.79
TRAF4-209ENST00000473421 SLC26A8Q96RN1 970 aa19.97■□□□□ 0.79
TRAF4-209ENST00000473421 ERBINQ96RT1 1412 aa19.96■□□□□ 0.79
TRAF4-209ENST00000473421 CHIC2Q9UKJ5 165 aa19.96■□□□□ 0.79
TRAF4-209ENST00000473421 EID1Q9Y6B2 187 aa19.96■□□□□ 0.79
TRAF4-209ENST00000473421 TMEM94Q12767 1356 aa19.95■□□□□ 0.79
TRAF4-209ENST00000473421 PTPN23Q9H3S7 1636 aa19.95■□□□□ 0.78
TRAF4-209ENST00000473421 DAPK1P53355 1430 aa19.94■□□□□ 0.78
TRAF4-209ENST00000473421 POTEAQ6S8J7 498 aa19.94■□□□□ 0.78
TRAF4-209ENST00000473421 TET3O43151 1660 aa19.94■□□□□ 0.78
TRAF4-209ENST00000473421 FAM135BQ49AJ0 1406 aa19.93■□□□□ 0.78
TRAF4-209ENST00000473421 STAG3Q9UJ98 1225 aa19.92■□□□□ 0.78
TRAF4-209ENST00000473421 EFCAB6Q5THR3 1501 aa19.92■□□□□ 0.78
TRAF4-209ENST00000473421 KCNA6P17658 529 aa19.91■□□□□ 0.78
TRAF4-209ENST00000473421 PROSER2Q86WR7 435 aaPredicted RBP19.89■□□□□ 0.77
TRAF4-209ENST00000473421 ROBO1Q9Y6N7 1651 aa19.88■□□□□ 0.77
TRAF4-209ENST00000473421 LMTK2Q8IWU2 1503 aa19.88■□□□□ 0.77
TRAF4-209ENST00000473421 NOS1P29475 1434 aa19.88■□□□□ 0.77
TRAF4-209ENST00000473421 FGD6Q6ZV73 1430 aa19.88■□□□□ 0.77
TRAF4-209ENST00000473421 KANK1Q14678 1352 aa19.86■□□□□ 0.77
TRAF4-209ENST00000473421 KDM5AP29375 1690 aaKnown RBP19.85■□□□□ 0.77
TRAF4-209ENST00000473421 ANKRD30AQ9BXX3 1397 aa19.83■□□□□ 0.77
TRAF4-209ENST00000473421 ADGRB3O60242 1522 aa19.82■□□□□ 0.76
TRAF4-209ENST00000473421 NWD1Q149M9 1564 aa19.82■□□□□ 0.76
TRAF4-209ENST00000473421 MYO5BQ9ULV0 1848 aa19.81■□□□□ 0.76
TRAF4-209ENST00000473421 ZFYVE9O95405 1425 aa19.79■□□□□ 0.76
TRAF4-209ENST00000473421 BCANQ96GW7 911 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms