RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CASKIN1Q8WXD9 1431 aa14.7□□□□□ -0.06
APTX-216ENST00000472896 MIER1Q8N108 512 aa14.7□□□□□ -0.06
APTX-216ENST00000472896 GPATCH8Q9UKJ3 1502 aaKnown RBP14.7□□□□□ -0.06
APTX-216ENST00000472896 SYCP2Q9BX26 1530 aa14.69□□□□□ -0.06
APTX-216ENST00000472896 CEP170BQ9Y4F5 1589 aaPredicted RBP14.69□□□□□ -0.06
APTX-216ENST00000472896 MYO3AQ8NEV4 1616 aa14.69□□□□□ -0.06
APTX-216ENST00000472896 ZNF142P52746 1687 aaPredicted RBP14.68□□□□□ -0.06
APTX-216ENST00000472896 A2MP01023 1474 aa14.68□□□□□ -0.06
APTX-216ENST00000472896 CCDC18Q5T9S5 1454 aa14.67□□□□□ -0.06
APTX-216ENST00000472896 ATP7AQ04656 1500 aa14.66□□□□□ -0.06
APTX-216ENST00000472896 MED1Q15648 1581 aaPredicted RBP14.66□□□□□ -0.06
APTX-216ENST00000472896 PLXNC1O60486 1568 aa14.65□□□□□ -0.06
APTX-216ENST00000472896 FBXO31Q5XUX0 539 aaPredicted RBP14.65□□□□□ -0.06
APTX-216ENST00000472896 KIAA1107Q9UPP5 1409 aa14.65□□□□□ -0.06
APTX-216ENST00000472896 TOM1O60784 492 aa14.65□□□□□ -0.06
APTX-216ENST00000472896 CFDP1Q9UEE9 299 aaPredicted RBP14.65□□□□□ -0.06
APTX-216ENST00000472896 A2ML1A8K2U0 1454 aa14.63□□□□□ -0.07
APTX-216ENST00000472896 ZNF644Q9H582 1327 aaPredicted RBP14.63□□□□□ -0.07
APTX-216ENST00000472896 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
APTX-216ENST00000472896 SUPT16HQ9Y5B9 1047 aaKnown RBP14.62□□□□□ -0.07
APTX-216ENST00000472896 INO80Q9ULG1 1556 aaPredicted RBP14.62□□□□□ -0.07
APTX-216ENST00000472896 TSHZ2Q9NRE2 1034 aa14.62□□□□□ -0.07
APTX-216ENST00000472896 SHANK2Q9UPX8 1470 aa14.62□□□□□ -0.07
APTX-216ENST00000472896 NEURL4Q96JN8 1562 aa14.6□□□□□ -0.07
APTX-216ENST00000472896 PLEKHH2Q8IVE3 1493 aa14.59□□□□□ -0.07
APTX-216ENST00000472896 CCNB3Q8WWL7 1395 aa14.59□□□□□ -0.07
APTX-216ENST00000472896 CPS1P31327 1500 aa14.58□□□□□ -0.08
APTX-216ENST00000472896 TNRQ92752 1358 aa14.58□□□□□ -0.08
APTX-216ENST00000472896 ALKQ9UM73 1620 aa14.58□□□□□ -0.08
APTX-216ENST00000472896 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.08
APTX-216ENST00000472896 ANKLE2Q86XL3 938 aa14.57□□□□□ -0.08
APTX-216ENST00000472896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
APTX-216ENST00000472896 MBD5Q9P267 1494 aa14.56□□□□□ -0.08
APTX-216ENST00000472896 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
APTX-216ENST00000472896 KIF3BO15066 747 aa14.56□□□□□ -0.08
APTX-216ENST00000472896 VWDEQ8N2E2 1590 aa14.55□□□□□ -0.08
APTX-216ENST00000472896 ADGBQ8N7X0 1667 aa14.55□□□□□ -0.08
APTX-216ENST00000472896 POLR1AO95602 1720 aaPredicted RBP14.54□□□□□ -0.08
APTX-216ENST00000472896 THEMISQ8N1K5 641 aaPredicted RBP14.53□□□□□ -0.08
APTX-216ENST00000472896 RTEL1-TNFRSF6BF6WH68 1400 aa14.52□□□□□ -0.09
APTX-216ENST00000472896 NPHP4O75161 1426 aaPredicted RBP14.52□□□□□ -0.09
APTX-216ENST00000472896 MIA2Q96PC5 1412 aa14.52□□□□□ -0.09
APTX-216ENST00000472896 RGS17Q9UGC6 210 aaPredicted RBP14.52□□□□□ -0.09
APTX-216ENST00000472896 PZPP20742 1482 aa14.52□□□□□ -0.09
APTX-216ENST00000472896 WASHC2CQ9Y4E1 1318 aa14.51□□□□□ -0.09
APTX-216ENST00000472896 MTUS2Q5JR59 1369 aa14.51□□□□□ -0.09
APTX-216ENST00000472896 MED14O60244 1454 aa14.5□□□□□ -0.09
APTX-216ENST00000472896 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
APTX-216ENST00000472896 STRCP1A6NGW2 1772 aa14.49□□□□□ -0.09
APTX-216ENST00000472896 LRRC7Q96NW7 1537 aa14.48□□□□□ -0.09
APTX-216ENST00000472896 TIAM1Q13009 1591 aa14.48□□□□□ -0.09
APTX-216ENST00000472896 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
APTX-216ENST00000472896 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
APTX-216ENST00000472896 KDM5DQ9BY66 1539 aa14.47□□□□□ -0.09
APTX-216ENST00000472896 NLRP1Q9C000 1473 aa14.46□□□□□ -0.09
APTX-216ENST00000472896 DEPDC5O75140 1603 aa14.46□□□□□ -0.1
APTX-216ENST00000472896 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
APTX-216ENST00000472896 IQGAP1P46940 1657 aa14.43□□□□□ -0.1
APTX-216ENST00000472896 CCDC141Q6ZP82 1450 aa14.41□□□□□ -0.1
APTX-216ENST00000472896 LTKP29376 864 aa14.4□□□□□ -0.1
APTX-216ENST00000472896 RSPH4AQ5TD94 716 aa14.4□□□□□ -0.1
APTX-216ENST00000472896 POTEAQ6S8J7 498 aa14.4□□□□□ -0.1
APTX-216ENST00000472896 CAMSAP2Q08AD1 1489 aa14.39□□□□□ -0.11
APTX-216ENST00000472896 EHBP1L1Q8N3D4 1523 aa14.38□□□□□ -0.11
APTX-216ENST00000472896 RNF17Q9BXT8 1623 aaKnown RBP14.38□□□□□ -0.11
APTX-216ENST00000472896 TSPY4P0CV99 314 aa14.37□□□□□ -0.11
APTX-216ENST00000472896 TSPY10P0CW01 314 aa14.37□□□□□ -0.11
APTX-216ENST00000472896 TXNDC2Q86VQ3 553 aa14.37□□□□□ -0.11
APTX-216ENST00000472896 ABCC3O15438 1527 aa14.37□□□□□ -0.11
APTX-216ENST00000472896 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
APTX-216ENST00000472896 ERVK-7P63135 1459 aa14.36□□□□□ -0.11
APTX-216ENST00000472896 NCOA2Q15596 1464 aa14.36□□□□□ -0.11
APTX-216ENST00000472896 CFAP65Q6ZU64 1925 aaKnown RBP14.36□□□□□ -0.11
APTX-216ENST00000472896 XIRP1Q702N8 1843 aaKnown RBP14.35□□□□□ -0.11
APTX-216ENST00000472896 SYNMO15061 1565 aa14.35□□□□□ -0.11
APTX-216ENST00000472896 SCAF11Q99590 1463 aaKnown RBP14.34□□□□□ -0.11
APTX-216ENST00000472896 FAM135BQ49AJ0 1406 aa14.33□□□□□ -0.12
APTX-216ENST00000472896 UBR1Q8IWV7 1749 aa14.32□□□□□ -0.12
APTX-216ENST00000472896 ERICH6Q7L0X2 663 aa14.32□□□□□ -0.12
APTX-216ENST00000472896 ARHGEF5Q12774 1597 aa14.32□□□□□ -0.12
APTX-216ENST00000472896 RBM33Q96EV2 1170 aaKnown RBP14.32□□□□□ -0.12
APTX-216ENST00000472896 ARHGAP23Q9P227 1491 aa14.31□□□□□ -0.12
APTX-216ENST00000472896 MROH1Q8NDA8 1641 aa14.3□□□□□ -0.12
APTX-216ENST00000472896 PRKCSHP14314 528 aaPredicted RBP14.29□□□□□ -0.12
APTX-216ENST00000472896 SLIT1O75093 1534 aa14.29□□□□□ -0.12
APTX-216ENST00000472896 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
APTX-216ENST00000472896 EID1Q9Y6B2 187 aa14.28□□□□□ -0.12
APTX-216ENST00000472896 CEP152O94986 1710 aa14.28□□□□□ -0.12
APTX-216ENST00000472896 PROSER2Q86WR7 435 aaPredicted RBP14.27□□□□□ -0.13
APTX-216ENST00000472896 KCNA6P17658 529 aa14.26□□□□□ -0.13
APTX-216ENST00000472896 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
APTX-216ENST00000472896 RBM19Q9Y4C8 960 aaKnown RBP14.26□□□□□ -0.13
APTX-216ENST00000472896 MAST1Q9Y2H9 1570 aa14.26□□□□□ -0.13
APTX-216ENST00000472896 TMEM2Q9UHN6 1383 aa14.25□□□□□ -0.13
APTX-216ENST00000472896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
APTX-216ENST00000472896 EIF2AK4Q9P2K8 1649 aaKnown RBP14.24□□□□□ -0.13
APTX-216ENST00000472896 IDI1Q13907 227 aa14.23□□□□□ -0.13
APTX-216ENST00000472896 ARHGAP31Q2M1Z3 1444 aa14.23□□□□□ -0.13
APTX-216ENST00000472896 ROBO1Q9Y6N7 1651 aa14.23□□□□□ -0.13
APTX-216ENST00000472896 KANK4Q5T7N3 995 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms