RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 KCNK17Q96T54 332 aa16.51■□□□□ 0.23
SGCE-210ENST00000472326 PSEN2P49810 448 aa16.5■□□□□ 0.23
SGCE-210ENST00000472326 C6orf132Q5T0Z8 1188 aa16.5■□□□□ 0.23
SGCE-210ENST00000472326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.5■□□□□ 0.23
SGCE-210ENST00000472326 CDHR5Q9HBB8 845 aa16.5■□□□□ 0.23
SGCE-210ENST00000472326 PTPREP23469 700 aa16.47■□□□□ 0.23
SGCE-210ENST00000472326 LMOD2Q6P5Q4 547 aa16.47■□□□□ 0.23
SGCE-210ENST00000472326 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
SGCE-210ENST00000472326 ARHGAP33O14559 1287 aa16.45■□□□□ 0.22
SGCE-210ENST00000472326 CDAN1Q8IWY9 1227 aa16.45■□□□□ 0.22
SGCE-210ENST00000472326 COL9A1P20849 921 aa16.44■□□□□ 0.22
SGCE-210ENST00000472326 PBX2P40425 430 aa16.43■□□□□ 0.22
SGCE-210ENST00000472326 DMRTA1Q5VZB9 504 aa16.42■□□□□ 0.22
SGCE-210ENST00000472326 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
SGCE-210ENST00000472326 KRTAP3-3Q9BYR6 98 aa16.4■□□□□ 0.22
SGCE-210ENST00000472326 KRTAP3-2Q9BYR7 98 aa16.4■□□□□ 0.22
SGCE-210ENST00000472326 GPIHBP1Q8IV16 184 aa16.39■□□□□ 0.21
SGCE-210ENST00000472326 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
SGCE-210ENST00000472326 NPDC1Q9NQX5 325 aaPredicted RBP16.38■□□□□ 0.21
SGCE-210ENST00000472326 LSM11P83369 360 aaKnown RBP eCLIP16.34■□□□□ 0.21
SGCE-210ENST00000472326 PTGDRQ13258 359 aa16.34■□□□□ 0.21
SGCE-210ENST00000472326 GPR37O15354 613 aa16.33■□□□□ 0.2
SGCE-210ENST00000472326 PROX2Q3B8N5 592 aa16.32■□□□□ 0.2
SGCE-210ENST00000472326 ANKRD13DQ6ZTN6 518 aa16.32■□□□□ 0.2
SGCE-210ENST00000472326 ZBED2Q9BTP6 218 aa16.32■□□□□ 0.2
SGCE-210ENST00000472326 FCHSD2O94868 740 aa16.31■□□□□ 0.2
SGCE-210ENST00000472326 CERKQ8TCT0 537 aa16.29■□□□□ 0.2
SGCE-210ENST00000472326 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
SGCE-210ENST00000472326 PRSS12P56730 875 aa16.26■□□□□ 0.19
SGCE-210ENST00000472326 ZC3H15Q8WU90 426 aaKnown RBP16.26■□□□□ 0.19
SGCE-210ENST00000472326 PADI6Q6TGC4 694 aa16.25■□□□□ 0.19
SGCE-210ENST00000472326 FAM198AQ9UFP1 575 aa16.25■□□□□ 0.19
SGCE-210ENST00000472326 VPS9D1Q9Y2B5 631 aa16.25■□□□□ 0.19
SGCE-210ENST00000472326 FECHP22830 423 aa16.24■□□□□ 0.19
SGCE-210ENST00000472326 ADGRD1Q6QNK2 874 aa16.24■□□□□ 0.19
SGCE-210ENST00000472326 TSKSQ9UJT2 592 aa16.24■□□□□ 0.19
SGCE-210ENST00000472326 HIC1Q14526 733 aa16.23■□□□□ 0.19
SGCE-210ENST00000472326 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
SGCE-210ENST00000472326 GNPATO15228 680 aa16.22■□□□□ 0.19
SGCE-210ENST00000472326 SLC4A5Q9BY07 1137 aa16.21■□□□□ 0.19
SGCE-210ENST00000472326 TK2O00142 265 aa16.2■□□□□ 0.18
SGCE-210ENST00000472326 PCDH10Q9P2E7 1040 aa16.2■□□□□ 0.18
SGCE-210ENST00000472326 KIAA1468Q9P260 1216 aa16.19■□□□□ 0.18
SGCE-210ENST00000472326 TTC13Q8NBP0 860 aa16.17■□□□□ 0.18
SGCE-210ENST00000472326 RBM27Q9P2N5 1060 aaKnown RBP16.17■□□□□ 0.18
SGCE-210ENST00000472326 C3orf80F5H4A9 247 aa16.16■□□□□ 0.18
SGCE-210ENST00000472326 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
SGCE-210ENST00000472326 ZMYND10O75800 440 aa16.14■□□□□ 0.17
SGCE-210ENST00000472326 RABGEF1Q9UJ41 708 aa16.14■□□□□ 0.17
SGCE-210ENST00000472326 SMAPO00193 183 aa16.13■□□□□ 0.17
SGCE-210ENST00000472326 HRO43593 1189 aa16.13■□□□□ 0.17
SGCE-210ENST00000472326 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
SGCE-210ENST00000472326 PACS2Q86VP3 889 aa16.13■□□□□ 0.17
SGCE-210ENST00000472326 SEPT9Q9UHD8 586 aaPredicted RBP16.12■□□□□ 0.17
SGCE-210ENST00000472326 TPRNQ4KMQ1 711 aa16.11■□□□□ 0.17
SGCE-210ENST00000472326 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
SGCE-210ENST00000472326 BHMG1C9JSJ3 638 aaPredicted RBP16.1■□□□□ 0.17
SGCE-210ENST00000472326 BARGINQ6ZT62 677 aa16.1■□□□□ 0.17
SGCE-210ENST00000472326 NUDT18Q6ZVK8 323 aa16.1■□□□□ 0.17
SGCE-210ENST00000472326 TATDN2Q93075 761 aa16.08■□□□□ 0.16
SGCE-210ENST00000472326 ADGRG1Q9Y653 693 aa16.08■□□□□ 0.16
SGCE-210ENST00000472326 NBPF26B4DH59 902 aa16.07■□□□□ 0.16
SGCE-210ENST00000472326 MAP2K5Q13163 448 aa16.07■□□□□ 0.16
SGCE-210ENST00000472326 KRI1Q8N9T8 703 aaKnown RBP16.07■□□□□ 0.16
SGCE-210ENST00000472326 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
SGCE-210ENST00000472326 MRPL50Q8N5N7 158 aaKnown RBP16.05■□□□□ 0.16
SGCE-210ENST00000472326 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
SGCE-210ENST00000472326 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
SGCE-210ENST00000472326 SPNS2Q8IVW8 549 aa16.03■□□□□ 0.16
SGCE-210ENST00000472326 IRF6O14896 467 aa16.02■□□□□ 0.16
SGCE-210ENST00000472326 CCDC102AQ96A19 550 aa16.02■□□□□ 0.16
SGCE-210ENST00000472326 MINK1Q8N4C8 1332 aaPredicted RBP16.01■□□□□ 0.15
SGCE-210ENST00000472326 EYA1Q99502 592 aa16.01■□□□□ 0.15
SGCE-210ENST00000472326 SLC24A3Q9HC58 644 aa16■□□□□ 0.15
SGCE-210ENST00000472326 RBM46Q8TBY0 533 aaKnown RBP15.99■□□□□ 0.15
SGCE-210ENST00000472326 FAM98CQ17RN3 349 aaKnown RBP15.98■□□□□ 0.15
SGCE-210ENST00000472326 METTL3Q86U44 580 aaKnown RBP15.98■□□□□ 0.15
SGCE-210ENST00000472326 PXYLP1Q8TE99 480 aa15.98■□□□□ 0.15
SGCE-210ENST00000472326 OATP04181 439 aa15.97■□□□□ 0.15
SGCE-210ENST00000472326 NLRP7Q8WX94 980 aa15.97■□□□□ 0.15
SGCE-210ENST00000472326 PHOX2BQ99453 314 aa15.97■□□□□ 0.15
SGCE-210ENST00000472326 LAPTM4BQ86VI4 370 aa15.96■□□□□ 0.15
SGCE-210ENST00000472326 GOLGA8CPA6NN73 597 aa15.95■□□□□ 0.14
SGCE-210ENST00000472326 ZFRQ96KR1 1074 aaKnown RBP15.95■□□□□ 0.14
SGCE-210ENST00000472326 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
SGCE-210ENST00000472326 RCCD1A6NED2 376 aa15.93■□□□□ 0.14
SGCE-210ENST00000472326 KCTD12Q96CX2 325 aaKnown RBP15.9■□□□□ 0.14
SGCE-210ENST00000472326 DNAJB2P25686 324 aa15.89■□□□□ 0.13
SGCE-210ENST00000472326 AK7Q96M32 723 aa15.89■□□□□ 0.13
SGCE-210ENST00000472326 SAMD7Q7Z3H4 446 aa15.88■□□□□ 0.13
SGCE-210ENST00000472326 WNT2BQ93097 391 aa15.88■□□□□ 0.13
SGCE-210ENST00000472326 SWT1Q5T5J6 900 aaKnown RBP15.87■□□□□ 0.13
SGCE-210ENST00000472326 ANKK1Q8NFD2 765 aa15.87■□□□□ 0.13
SGCE-210ENST00000472326 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.86■□□□□ 0.13
SGCE-210ENST00000472326 TRIM66O15016 1216 aa15.85■□□□□ 0.13
SGCE-210ENST00000472326 MMRN1Q13201 1228 aa15.85■□□□□ 0.13
SGCE-210ENST00000472326 TMEM134Q9H6X4 195 aa15.85■□□□□ 0.13
SGCE-210ENST00000472326 BCAMP50895 628 aa15.84■□□□□ 0.13
SGCE-210ENST00000472326 RNF166Q96A37 237 aaPredicted RBP15.84■□□□□ 0.13
SGCE-210ENST00000472326 MDM2Q00987 491 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms