RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 CEBPAP49715 358 aaPredicted RBP23.29■■□□□ 1.32
ABCF3-208ENST00000471226 RRBP1Q9P2E9 1410 aaKnown RBP23.29■■□□□ 1.32
ABCF3-208ENST00000471226 CHIC2Q9UKJ5 165 aa23.29■■□□□ 1.32
ABCF3-208ENST00000471226 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
ABCF3-208ENST00000471226 PTPRKQ15262 1439 aa23.27■■□□□ 1.32
ABCF3-208ENST00000471226 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
ABCF3-208ENST00000471226 FAM135AQ9P2D6 1515 aa23.27■■□□□ 1.32
ABCF3-208ENST00000471226 ERBINQ96RT1 1412 aa23.26■■□□□ 1.31
ABCF3-208ENST00000471226 ZMYM3Q14202 1370 aa23.25■■□□□ 1.31
ABCF3-208ENST00000471226 MROH1Q8NDA8 1641 aa23.24■■□□□ 1.31
ABCF3-208ENST00000471226 PREX1Q8TCU6 1659 aa23.22■■□□□ 1.31
ABCF3-208ENST00000471226 KDM5DQ9BY66 1539 aa23.22■■□□□ 1.31
ABCF3-208ENST00000471226 LMTK3Q96Q04 1460 aa23.21■■□□□ 1.31
ABCF3-208ENST00000471226 DEPDC5O75140 1603 aa23.2■■□□□ 1.3
ABCF3-208ENST00000471226 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
ABCF3-208ENST00000471226 ROCK1Q13464 1354 aa23.19■■□□□ 1.3
ABCF3-208ENST00000471226 NPATQ14207 1427 aa23.17■■□□□ 1.3
ABCF3-208ENST00000471226 WASHC2CQ9Y4E1 1318 aa23.17■■□□□ 1.3
ABCF3-208ENST00000471226 PRDM15P57071 1507 aaPredicted RBP23.17■■□□□ 1.3
ABCF3-208ENST00000471226 CEP152O94986 1710 aa23.16■■□□□ 1.3
ABCF3-208ENST00000471226 ABCC3O15438 1527 aa23.15■■□□□ 1.3
ABCF3-208ENST00000471226 ITGAEP38570 1179 aa23.14■■□□□ 1.29
ABCF3-208ENST00000471226 ANKRD50Q9ULJ7 1429 aa23.14■■□□□ 1.29
ABCF3-208ENST00000471226 PZPP20742 1482 aa23.11■■□□□ 1.29
ABCF3-208ENST00000471226 UHRF1BP1Q6BDS2 1440 aa23.11■■□□□ 1.29
ABCF3-208ENST00000471226 CAMSAP1Q5T5Y3 1602 aa23.11■■□□□ 1.29
ABCF3-208ENST00000471226 VWDEQ8N2E2 1590 aa23.1■■□□□ 1.29
ABCF3-208ENST00000471226 CFAP65Q6ZU64 1925 aaKnown RBP23.08■■□□□ 1.28
ABCF3-208ENST00000471226 KANK1Q14678 1352 aa23.06■■□□□ 1.28
ABCF3-208ENST00000471226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.06■■□□□ 1.28
ABCF3-208ENST00000471226 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
ABCF3-208ENST00000471226 LMTK2Q8IWU2 1503 aa23.05■■□□□ 1.28
ABCF3-208ENST00000471226 HSPA2P54652 639 aa23.05■■□□□ 1.28
ABCF3-208ENST00000471226 FBXO31Q5XUX0 539 aaPredicted RBP23.05■■□□□ 1.28
ABCF3-208ENST00000471226 UNC13BO14795 1591 aa23.05■■□□□ 1.28
ABCF3-208ENST00000471226 ZNF142P52746 1687 aaPredicted RBP23.04■■□□□ 1.28
ABCF3-208ENST00000471226 ARHGAP31Q2M1Z3 1444 aa23.04■■□□□ 1.28
ABCF3-208ENST00000471226 GCC2Q8IWJ2 1684 aa23.02■■□□□ 1.28
ABCF3-208ENST00000471226 SPATA31D1Q6ZQQ2 1576 aa23.01■■□□□ 1.27
ABCF3-208ENST00000471226 TNRQ92752 1358 aa23.01■■□□□ 1.27
ABCF3-208ENST00000471226 CEP170BQ9Y4F5 1589 aaPredicted RBP23■■□□□ 1.27
ABCF3-208ENST00000471226 NAIPQ13075 1403 aa22.99■■□□□ 1.27
ABCF3-208ENST00000471226 ERVK-7P63135 1459 aa22.98■■□□□ 1.27
ABCF3-208ENST00000471226 STRCQ7RTU9 1775 aa22.97■■□□□ 1.27
ABCF3-208ENST00000471226 EFCAB6Q5THR3 1501 aa22.97■■□□□ 1.27
ABCF3-208ENST00000471226 A2ML1A8K2U0 1454 aa22.96■■□□□ 1.27
ABCF3-208ENST00000471226 IQGAP3Q86VI3 1631 aa22.96■■□□□ 1.27
ABCF3-208ENST00000471226 TET3O43151 1660 aa22.96■■□□□ 1.27
ABCF3-208ENST00000471226 HFM1A2PYH4 1435 aa22.95■■□□□ 1.26
ABCF3-208ENST00000471226 NLRP1Q9C000 1473 aa22.94■■□□□ 1.26
ABCF3-208ENST00000471226 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
ABCF3-208ENST00000471226 NUP155O75694 1391 aa22.89■■□□□ 1.26
ABCF3-208ENST00000471226 E9PCH4 1651 aa22.88■■□□□ 1.25
ABCF3-208ENST00000471226 PLA2R1Q13018 1463 aa22.87■■□□□ 1.25
ABCF3-208ENST00000471226 NOS1P29475 1434 aa22.87■■□□□ 1.25
ABCF3-208ENST00000471226 SYNMO15061 1565 aa22.86■■□□□ 1.25
ABCF3-208ENST00000471226 UGGT1Q9NYU2 1555 aa22.86■■□□□ 1.25
ABCF3-208ENST00000471226 UBR1Q8IWV7 1749 aa22.85■■□□□ 1.25
ABCF3-208ENST00000471226 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
ABCF3-208ENST00000471226 THEMISQ8N1K5 641 aaPredicted RBP22.81■■□□□ 1.24
ABCF3-208ENST00000471226 DMRT2Q9Y5R5 561 aa22.81■■□□□ 1.24
ABCF3-208ENST00000471226 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
ABCF3-208ENST00000471226 POLR1AO95602 1720 aaPredicted RBP22.8■■□□□ 1.24
ABCF3-208ENST00000471226 PTPRTO14522 1441 aa22.8■■□□□ 1.24
ABCF3-208ENST00000471226 PKD2Q13563 968 aa22.78■■□□□ 1.24
ABCF3-208ENST00000471226 NCKAP5LQ9HCH0 1330 aa22.78■■□□□ 1.24
ABCF3-208ENST00000471226 IDI1Q13907 227 aa22.77■■□□□ 1.24
ABCF3-208ENST00000471226 SLC52A1Q9NWF4 448 aa22.77■■□□□ 1.24
ABCF3-208ENST00000471226 SPHKAPQ2M3C7 1700 aa22.74■■□□□ 1.23
ABCF3-208ENST00000471226 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
ABCF3-208ENST00000471226 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
ABCF3-208ENST00000471226 NEURL4Q96JN8 1562 aa22.73■■□□□ 1.23
ABCF3-208ENST00000471226 ANKLE2Q86XL3 938 aa22.72■■□□□ 1.23
ABCF3-208ENST00000471226 MYO5BQ9ULV0 1848 aa22.72■■□□□ 1.23
ABCF3-208ENST00000471226 ARHGAP23Q9P227 1491 aa22.72■■□□□ 1.23
ABCF3-208ENST00000471226 SLIT1O75093 1534 aa22.72■■□□□ 1.23
ABCF3-208ENST00000471226 ADGRB3O60242 1522 aa22.71■■□□□ 1.23
ABCF3-208ENST00000471226 MED14O60244 1454 aa22.69■■□□□ 1.22
ABCF3-208ENST00000471226 TMEM131LA2VDJ0 1609 aa22.68■■□□□ 1.22
ABCF3-208ENST00000471226 ACIN1Q9UKV3 1341 aaKnown RBP22.68■■□□□ 1.22
ABCF3-208ENST00000471226 STAG3Q9UJ98 1225 aa22.68■■□□□ 1.22
ABCF3-208ENST00000471226 TMEM2Q9UHN6 1383 aa22.66■■□□□ 1.22
ABCF3-208ENST00000471226 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
ABCF3-208ENST00000471226 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
ABCF3-208ENST00000471226 SCAF11Q99590 1463 aaKnown RBP22.64■■□□□ 1.21
ABCF3-208ENST00000471226 IQGAP1P46940 1657 aa22.64■■□□□ 1.21
ABCF3-208ENST00000471226 NPHP4O75161 1426 aaPredicted RBP22.64■■□□□ 1.21
ABCF3-208ENST00000471226 TRPM2O94759 1503 aa22.63■■□□□ 1.21
ABCF3-208ENST00000471226 LTKP29376 864 aa22.63■■□□□ 1.21
ABCF3-208ENST00000471226 TXNDC2Q86VQ3 553 aa22.61■■□□□ 1.21
ABCF3-208ENST00000471226 CLTCL1P53675 1640 aa22.6■■□□□ 1.21
ABCF3-208ENST00000471226 ILDR1Q86SU0 546 aaPredicted RBP22.6■■□□□ 1.21
ABCF3-208ENST00000471226 MPHOSPH9Q99550 1183 aa22.6■■□□□ 1.21
ABCF3-208ENST00000471226 LTBP4Q8N2S1 1624 aa22.6■■□□□ 1.21
ABCF3-208ENST00000471226 HRCP23327 699 aa22.59■■□□□ 1.21
ABCF3-208ENST00000471226 EID1Q9Y6B2 187 aa22.59■■□□□ 1.21
ABCF3-208ENST00000471226 KIF1BO60333 1816 aa22.59■■□□□ 1.21
ABCF3-208ENST00000471226 ZFYVE9O95405 1425 aa22.57■■□□□ 1.2
ABCF3-208ENST00000471226 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
ABCF3-208ENST00000471226 RIMS2Q9UQ26 1411 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms