RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PAF1Q8N7H5 531 aa8.52□□□□□ -1.05
BRCA1-210ENST00000471181 NOM1Q5C9Z4 860 aaKnown RBP8.52□□□□□ -1.05
BRCA1-210ENST00000471181 WIZO95785 1651 aa8.52□□□□□ -1.05
BRCA1-210ENST00000471181 IPO7O95373 1038 aaKnown RBP8.52□□□□□ -1.05
BRCA1-210ENST00000471181 HSP90AB2PQ58FF8 381 aa8.52□□□□□ -1.05
BRCA1-210ENST00000471181 ZFYVE27Q5T4F4 411 aa8.52□□□□□ -1.05
BRCA1-210ENST00000471181 RWDD1Q9H446 243 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-210ENST00000471181 FAM184AQ8NB25 1140 aa8.51□□□□□ -1.05
BRCA1-210ENST00000471181 CHMP7Q8WUX9 453 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-210ENST00000471181 CECR2Q9BXF3 1484 aa8.51□□□□□ -1.05
BRCA1-210ENST00000471181 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
BRCA1-210ENST00000471181 MCTP1Q6DN14 999 aa8.5□□□□□ -1.05
BRCA1-210ENST00000471181 MSH5O43196 834 aa8.5□□□□□ -1.05
BRCA1-210ENST00000471181 MLECQ14165 292 aa8.5□□□□□ -1.05
BRCA1-210ENST00000471181 SAMD1Q6SPF0 538 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-210ENST00000471181 SLC4A10Q6U841 1118 aa8.5□□□□□ -1.05
BRCA1-210ENST00000471181 HOMER1Q86YM7 354 aa8.5□□□□□ -1.05
BRCA1-210ENST00000471181 CCDC43Q96MW1 224 aaKnown RBP8.5□□□□□ -1.05
BRCA1-210ENST00000471181 HMGXB3Q12766 1538 aa8.5□□□□□ -1.05
BRCA1-210ENST00000471181 TCERG1O14776 1098 aaKnown RBP8.5□□□□□ -1.05
BRCA1-210ENST00000471181 DHX37Q8IY37 1157 aaKnown RBP8.5□□□□□ -1.05
BRCA1-210ENST00000471181 FBXW7Q969H0 707 aa8.5□□□□□ -1.05
BRCA1-210ENST00000471181 DHX16O60231 1041 aaKnown RBP8.5□□□□□ -1.05
BRCA1-210ENST00000471181 KIF3AQ9Y496 699 aa8.49□□□□□ -1.05
BRCA1-210ENST00000471181 RDXP35241 583 aaKnown RBP8.49□□□□□ -1.05
BRCA1-210ENST00000471181 CCDC47Q96A33 483 aaKnown RBP8.49□□□□□ -1.05
BRCA1-210ENST00000471181 STK31Q9BXU1 1019 aa8.49□□□□□ -1.05
BRCA1-210ENST00000471181 HSP90AB3PQ58FF7 597 aa8.49□□□□□ -1.05
BRCA1-210ENST00000471181 H0YHG0 523 aa8.48□□□□□ -1.05
BRCA1-210ENST00000471181 ANKRD20A12PQ8NF67 263 aa8.48□□□□□ -1.05
BRCA1-210ENST00000471181 DCTN1Q14203 1278 aa8.47□□□□□ -1.05
BRCA1-210ENST00000471181 SYNE3Q6ZMZ3 975 aa8.47□□□□□ -1.05
BRCA1-210ENST00000471181 ST18O60284 1047 aa8.47□□□□□ -1.05
BRCA1-210ENST00000471181 TMF1P82094 1093 aa8.47□□□□□ -1.05
BRCA1-210ENST00000471181 STK26Q9P289 416 aa8.47□□□□□ -1.05
BRCA1-210ENST00000471181 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
BRCA1-210ENST00000471181 AMOTL1Q8IY63 956 aa8.47□□□□□ -1.05
BRCA1-210ENST00000471181 NOL10Q9BSC4 688 aaKnown RBP8.46□□□□□ -1.05
BRCA1-210ENST00000471181 RSPH6AQ9H0K4 717 aa8.46□□□□□ -1.05
BRCA1-210ENST00000471181 FAM13BQ9NYF5 915 aa8.46□□□□□ -1.05
BRCA1-210ENST00000471181 ANKRD62A6NC57 917 aa8.46□□□□□ -1.06
BRCA1-210ENST00000471181 TRIM29Q14134 588 aa8.46□□□□□ -1.06
BRCA1-210ENST00000471181 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.06
BRCA1-210ENST00000471181 PLEKHD1A6NEE1 506 aa8.46□□□□□ -1.06
BRCA1-210ENST00000471181 ACBD3Q9H3P7 528 aa8.46□□□□□ -1.06
BRCA1-210ENST00000471181 TRHP20396 242 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-210ENST00000471181 STK11IPQ8N1F8 1099 aa8.45□□□□□ -1.06
BRCA1-210ENST00000471181 CAGE1Q8TC20 777 aa8.45□□□□□ -1.06
BRCA1-210ENST00000471181 SPAG9O60271 1321 aaKnown RBP8.45□□□□□ -1.06
BRCA1-210ENST00000471181 HDGFL2Q7Z4V5 671 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-210ENST00000471181 RILPL2Q969X0 211 aa8.45□□□□□ -1.06
BRCA1-210ENST00000471181 KLHL34Q8N239 644 aa8.45□□□□□ -1.06
BRCA1-210ENST00000471181 PMFBP1Q8TBY8 1022 aa8.45□□□□□ -1.06
BRCA1-210ENST00000471181 CC2D2AQ9P2K1 1620 aa8.45□□□□□ -1.06
BRCA1-210ENST00000471181 DDX11L8A8MPP1 907 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 U2AF1L5P0DN76 240 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-210ENST00000471181 U2AF1Q01081 240 aaKnown RBP eCLIP8.44□□□□□ -1.06
BRCA1-210ENST00000471181 MEX3CQ5U5Q3 659 aaKnown RBP8.44□□□□□ -1.06
BRCA1-210ENST00000471181 CCDC97Q96F63 343 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-210ENST00000471181 FOSBP53539 338 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 ZRSR2Q15696 482 aaKnown RBP8.44□□□□□ -1.06
BRCA1-210ENST00000471181 TMEM132AQ24JP5 1023 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 HSP90B2PQ58FF3 399 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 MNS1Q8NEH6 495 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 EPS15P42566 896 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 TTLL5Q6EMB2 1281 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 SMC4Q9NTJ3 1288 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 TIMELESSQ9UNS1 1208 aa8.44□□□□□ -1.06
BRCA1-210ENST00000471181 DDX49Q9Y6V7 483 aaKnown RBP8.44□□□□□ -1.06
BRCA1-210ENST00000471181 NEFHP12036 1026 aa8.43□□□□□ -1.06
BRCA1-210ENST00000471181 HDGFP51858 240 aaKnown RBP8.43□□□□□ -1.06
BRCA1-210ENST00000471181 TOP2AP11388 1531 aaKnown RBP8.43□□□□□ -1.06
BRCA1-210ENST00000471181 TSPYL1Q9H0U9 437 aa8.43□□□□□ -1.06
BRCA1-210ENST00000471181 CCDC173Q0VFZ6 552 aa8.43□□□□□ -1.06
BRCA1-210ENST00000471181 ARGLU1Q9NWB6 273 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-210ENST00000471181 NEXNQ0ZGT2 675 aa8.42□□□□□ -1.06
BRCA1-210ENST00000471181 RSF1Q96T23 1441 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-210ENST00000471181 HDAC5Q9UQL6 1122 aa8.42□□□□□ -1.06
BRCA1-210ENST00000471181 HOOK1Q9UJC3 728 aaKnown RBP8.41□□□□□ -1.06
BRCA1-210ENST00000471181 CFDP1Q9UEE9 299 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-210ENST00000471181 PDILTQ8N807 584 aa8.41□□□□□ -1.06
BRCA1-210ENST00000471181 BICD2Q8TD16 824 aa8.41□□□□□ -1.06
BRCA1-210ENST00000471181 LTV1Q96GA3 475 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-210ENST00000471181 NFXL1Q6ZNB6 911 aa8.41□□□□□ -1.06
BRCA1-210ENST00000471181 DCAF11Q8TEB1 546 aa8.41□□□□□ -1.06
BRCA1-210ENST00000471181 CLUAP1Q96AJ1 413 aa8.41□□□□□ -1.06
BRCA1-210ENST00000471181 CWC15Q9P013 229 aaKnown RBP8.41□□□□□ -1.06
BRCA1-210ENST00000471181 OFD1O75665 1012 aa8.4□□□□□ -1.06
BRCA1-210ENST00000471181 IFT57Q9NWB7 429 aa8.4□□□□□ -1.06
BRCA1-210ENST00000471181 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
BRCA1-210ENST00000471181 ATP6V1DQ9Y5K8 247 aa8.4□□□□□ -1.06
BRCA1-210ENST00000471181 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
BRCA1-210ENST00000471181 MYO6Q9UM54 1294 aa8.4□□□□□ -1.06
BRCA1-210ENST00000471181 WWC2Q6AWC2 1192 aa8.4□□□□□ -1.07
BRCA1-210ENST00000471181 RCAN3Q9UKA8 241 aa8.39□□□□□ -1.07
BRCA1-210ENST00000471181 PPM1FP49593 454 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-210ENST00000471181 CCAR1Q8IX12 1150 aaKnown RBP8.39□□□□□ -1.07
BRCA1-210ENST00000471181 CPLX1O14810 134 aa8.39□□□□□ -1.07
BRCA1-210ENST00000471181 SEPT7Q16181 437 aaKnown RBP8.39□□□□□ -1.07
BRCA1-210ENST00000471181 KDM4AO75164 1064 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms